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Identification and functional analysis of small RNAs packaged into influenza virion

Research Project

Project/Area Number 24880014
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Applied veterinary science
Research InstitutionThe University of Tokyo

Principal Investigator

MURAKAMI Shin  東京大学, 農学生命科学研究科, 特任助教 (10636757)

Project Period (FY) 2012-08-31 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Fiscal Year 2013: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2012: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywordsインフルエンザ / ウイルス粒子 / non-coding RNA
Outline of Final Research Achievements

It is not known whether the various small RNAs, such as small RNA derived from host cells are incorporated in influenza A virus particles. Small RNAs which were extracted from viral particles grown in embryonated chicken eggs or in Vero cells were analyzed using the next generation sequencers. As a result, host-derived tRNA and viral genomic RNA fragments were detected. We established a MDCK cells stably expressing the RNA fragment of HA segment (MDCK-5’ HA) and examined viral growth in the cells. Viral growth kinetics in MDCK-5’ HA were similar to those in wild-type MDCK cells. The expression level and localization in virus-infected cells may differ from that in the MDCK-5’ HA cells. It is necessary to prepare a cells expressing amount increased viral genome fragments and to analyze in such cells.

Report

(3 results)
  • 2014 Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (3 results)

All 2013 2012

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (2 results)

  • [Journal Article] A replication-incompetent virus possessing an uncleavable hemagglutinin as an influenza vaccine2012

    • Author(s)
      Katsura H, Iwatsuki-Horimoto K, Fukuyama S, Watanabe S, Sakabe S, Hatta Y, Murakami S, Shimojima M, Horimoto T, Kawaoka Y
    • Journal Title

      Vaccine

      Volume: 30 Issue: 42 Pages: 6027-6033

    • DOI

      10.1016/j.vaccine.2012.07.059

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] PAとNPのアミノ酸変異がPB2分節欠損7本鎖インフルエンザウイルスの増殖性を高める2013

    • Author(s)
      村上晋、野田岳志、河岡義裕
    • Organizer
      第61回日本ウイルス学会学術集会
    • Place of Presentation
      神戸
    • Year and Date
      2013-11-10 – 2013-11-12
    • Related Report
      2013 Annual Research Report
  • [Presentation] リフトバレー熱ウイルスのRNAゲノムパッケージングシグナルの同定2012

    • Author(s)
      村上晋
    • Organizer
      第60回日本ウイルス学会学術集会
    • Place of Presentation
      大阪
    • Related Report
      2012 Annual Research Report

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Published: 2012-11-27   Modified: 2019-07-29  

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