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Ligand discovery based on biophysical analyses

Research Project

Project/Area Number 25249115
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Biofunction/Bioprocess
Research InstitutionThe University of Tokyo

Principal Investigator

Tsumoto Kouhei  東京大学, 工学(系)研究科(研究院), 教授 (90271866)

Co-Investigator(Kenkyū-buntansha) NAGATOISHI Satoru  東京大学, 大学院工学系研究科, 助教 (30550248)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥41,210,000 (Direct Cost: ¥31,700,000、Indirect Cost: ¥9,510,000)
Fiscal Year 2015: ¥7,670,000 (Direct Cost: ¥5,900,000、Indirect Cost: ¥1,770,000)
Fiscal Year 2014: ¥8,970,000 (Direct Cost: ¥6,900,000、Indirect Cost: ¥2,070,000)
Fiscal Year 2013: ¥24,570,000 (Direct Cost: ¥18,900,000、Indirect Cost: ¥5,670,000)
Keywords低分子創薬 / 熱力学解析 / フラグメントスクリーニング / 相互作用 / 蛋白質 / 低分子スクリーニング / 熱力学 / 生物・生体工学 / 分子認識 / 物理化学
Outline of Final Research Achievements

We studied fragment-based drug discovery based on the biophysical methods, including isothermal titration calorimetry (ITC), surface plasmon resonance (SPR), and differential scanning calorimetry (DSC). The hit compounds bound specifically to target proteins; the interactions between compounds and the targets were validated using these biophysical measurements and the binding mechanisms have been characterized thermodynamically. We carried out X-ray crystallographic analyses and in silico docking simulation to discuss the thermodynamics of the interactions. The crystal structure and docking simulation supported thermodynamic data. Moreover, one hit compound was optimized to bind strongly to the target protein, of which dissociation constant showed sub-micro molar. This research provides a novel rational strategy to obtain the true-hit compounds through screening small molecule compounds.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (81 results)

All 2016 2015 2014 2013

All Journal Article (36 results) (of which Int'l Joint Research: 11 results,  Peer Reviewed: 36 results,  Open Access: 16 results,  Acknowledgement Compliant: 9 results) Presentation (43 results) (of which Int'l Joint Research: 5 results,  Invited: 1 results) Book (2 results)

  • [Journal Article] Mitochonic Acid 5 Binds Mitochondria and Ameliorates Renal Tubular and Cardiac Myocyte Damage.2016

    • Author(s)
      Suzuki T, Nagatoishi S, Tsumoto K, Abe T. (全41人,5番目と25番目)
    • Journal Title

      J Am Soc Nephrol

      Volume: 印刷中

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Epiregulin Recognition Mechanisms by Anti-epiregulin Antibody 9E5: STRUCTURAL, FUNCTIONAL, AND MOLECULAR DYNAMICS SIMULATION ANALYSES.2016

    • Author(s)
      Kado Y1, Mizohata E2, Nagatoishi S3, Iijima M4, Shinoda K4, Miyafusa T3, Nakayama T2, Yoshizumi T2, Sugiyama A4, Kawamura T4, Lee YH4, Matsumura H2, Doi H4, Fujitani H4, Kodama T4, Shibasaki Y4, Tsumoto K5, Inoue T6.
    • Journal Title

      J Biol Chem.

      Volume: 291 Issue: 5 Pages: 2319-2330

    • DOI

      10.1074/jbc.m115.656009

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Reply to "The Broadly Neutralizing, Anti-HIV Antibody 4E10: an Open and Shut Case?"2016

    • Author(s)
      Rujas E, Gulzar N, Morante K, Tsumoto K, Scott JK, Nieva JL, Caaveiro JM
    • Journal Title

      J. Virol.

      Volume: 90(6) Issue: 6 Pages: 3276-3277

    • DOI

      10.1128/jvi.02970-15

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Integrative Network Analysis Combined with Quantitative Phosphoproteomics Reveals TGFBR2 as a Novel Regulator of Glioblastoma Stem Cell Properties2016

    • Author(s)
      Narushima Y, Kozuka-Hata H, Koyama-Nasu R, Tsumoto K, Inoue J, Akiyama T & Oyama M.
    • Journal Title

      Molecular and Cellular Proteomics

      Volume: 15 Issue: 3 Pages: 1017-1031

    • DOI

      10.1074/mcp.m115.049999

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Assessment of the Protein-Protein Interactions in a Highly Concentrated Antibody Solution by Using Raman Spectroscopy.2016

    • Author(s)
      Ota C, Noguchi S, Nagatoishi S, Tsumoto K
    • Journal Title

      Pharm. Res.

      Volume: 33(4) Issue: 4 Pages: 956-969

    • DOI

      10.1007/s11095-015-1842-8

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Quantitative phosphoproteomics-based molecular network description for high-resolution kinase-substrate interactome analysis.2016

    • Author(s)
      Narushima, Y., Kozuka-Hata, H., Tsumoto, K., Inoue, J. and Oyama, M.
    • Journal Title

      Bioinformatics

      Volume: 印刷中 Issue: 14 Pages: 2083-2088

    • DOI

      10.1093/bioinformatics/btw164

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A Pore-Forming Toxin Requires a Specific Residue for its Activity in Membranes with Particular Physicochemical Properties2015

    • Author(s)
      Koldo Morante, Jose M.M. Caaveiro, Koji Tanaka, Juan Manuel Gonzalez-Manas and Kouhei Tsumoto
    • Journal Title

      The Journal of Biological Chemistry

      Volume: M114 Issue: 17 Pages: 615211-615211

    • DOI

      10.1074/jbc.m114.615211

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Structural basis for binding of human IgG1 to its high-affinity human receptor FcgRI2015

    • Author(s)
      Kiyoshi M, Caaveiro JM, Kawai T, Tashiro S, Ide T, Asaoka Y, Hatayama K, Tsumoto K.
    • Journal Title

      Nat. Commun.

      Volume: 6 Issue: 1 Pages: 6866-6866

    • DOI

      10.1038/ncomms7866

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Protein stabilization by an amphiphilic short monodisperse oligo(ethylene glycol)2015

    • Author(s)
      Nabanita Sadhukhan, Takahiro Muraoka, Mihoko Ui, Satoru Nagatoishi, Kouhei Tsumoto, Kazushi Kinbara
    • Journal Title

      Chemical Communications

      Volume: 51 Issue: 40 Pages: 8457-8460

    • DOI

      10.1039/c4cc10301g

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] The Atomic Structure of the HIV-1 gp41 Transmembrane Domain and Its Connection to the Immunogenic Membrane-proximal External Region2015

    • Author(s)
      Apellaniz B, Rujas E, Serrano S, Morante K, Tsumoto K, Caaveiro JM, Jimenez MA, Nieva JL.
    • Journal Title

      J. Biol. Chem.

      Volume: 290 (21) Issue: 21 Pages: 12999-13015

    • DOI

      10.1074/jbc.m115.644351

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Thermodynamics of antibody-antigen interaction revealed by mutation analysis of antibody variable regions.2015

    • Author(s)
      Akiba H, Tsumoto K.
    • Journal Title

      J. Biol. chem

      Volume: 158(1) Issue: 1 Pages: 1-13

    • DOI

      10.1093/jb/mvv049

    • NAID

      40020522493

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Functional characterization of Val60, a key residue in the membrane-oligomerization of fragaceatoxin C, an Actinoporin from Actinia fragacea2015

    • Author(s)
      Morante K, Caaveiro JM, Viguera AR, Tsumoto K, Gonzalez-Manas JM
    • Journal Title

      FEBS Lett.

      Volume: 589(15) Issue: 15 Pages: 1840-1846

    • DOI

      10.1016/j.febslet.2015.06.012

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Osteomodulin regulates diameter and alters shape of collagen fibrils.2015

    • Author(s)
      Tashima T, Nagatoishi S, Sagara H, Ohnuma S, Tsumoto K.
    • Journal Title

      Biochem Biophys Res Commun.

      Volume: 463 Issue: 3 Pages: 292-296

    • DOI

      10.1016/j.bbrc.2015.05.053

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Differential binding of prohibitin-2 to estrogen receptor α and to drug-resistant ERα mutants.2015

    • Author(s)
      Chigira T, Nagatoishi S, Tsumoto K.
    • Journal Title

      Biochem Biophys Res Commun.

      Volume: 463 Issue: 4 Pages: 726-731

    • DOI

      10.1016/j.bbrc.2015.06.002

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Thermodynamic characterization of the interaction between human Y-box binding protein YB-1 and nucleic acids2015

    • Author(s)
      Tanabe Y, Nagatoishi S, Tsumoto K.
    • Journal Title

      Mol. Biosyst.

      Volume: 11 Issue: 9 Pages: 2441-2448

    • DOI

      10.1039/c5mb00184f

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Discovery and characterization of natural tropolones as inhibitors of the antibacterial target CapF from Staphylococcus aureus.2015

    • Author(s)
      Nakano K, Chigira T, Miyafusa T, Nagatoishi S, Caaveiro JM, Tsumoto K.
    • Journal Title

      Sci Rep.

      Volume: 5 Issue: 1 Pages: 15337-15337

    • DOI

      10.1038/srep15337

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Structural Analysis of Fc/FcγR Complexes: A Blueprint for Antibody Design.2015

    • Author(s)
      Caaveiro, J.M.M., Kiyoshi, M. and Tsumoto, K.
    • Journal Title

      Immunological Reviews

      Volume: 268 Issue: 1 Pages: 201-221

    • DOI

      10.1111/imr.12365

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Bidirectional transformation of a protein between its Native Water-Soluble and Transmembrane Conformations.2015

    • Author(s)
      Tanaka, K., Caaveiro, J.M.M., and Tsumoto, K.
    • Journal Title

      Biochemistry

      Volume: 54 Issue: 46 Pages: 6863-6866

    • DOI

      10.1021/acs.biochem.5b01112

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Structural and thermodynamics basis of epitope binding to neutralizing and non-neutralizing forms of the anti-HIV-1 4E10 antibody2015

    • Author(s)
      Rujas, E., Gulzar, N., Morante, K., Tsumoto, K., Scott, J.K., Nieva, J.L. and Caaveiro, J.M.M.
    • Journal Title

      Journal of Virology

      Volume: 89 Issue: 23 Pages: 11975-11991

    • DOI

      10.1128/jvi.01793-15

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Structural basis for inhibition of the Tob-CNOT7 interaction by a fragment screening approach.2015

    • Author(s)
      Bai Y, Tashiro S, Nagatoishi S, Suzuki T, Yan D, Liu R, Tsumoto K, Bartlam M, Yamamoto T.
    • Journal Title

      Protein Cell.

      Volume: 6 Issue: 12 Pages: 924-928

    • DOI

      10.1007/s13238-015-0225-6

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Rapid Heme Transfer Reactions between NEAr Transporter Domains of Staphylococcus aureus: A Theoretical Study Using QM/MM and MD Simulations.2015

    • Author(s)
      Moriwaki Y, Terada T, Tsumoto K, Shimizu K.
    • Journal Title

      PLoS One

      Volume: 10(12) Issue: 12 Pages: e0145125-e0145125

    • DOI

      10.1371/journal.pone.0145125

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] pH responsiveness of fibrous assemblies of repeat-sequence amphipathic α-helix polypeptides.2015

    • Author(s)
      Takei T, Tsumoto K, Okonogi A, Kimura A, Kojima S, Yazaki K, Takei T, Ueda T, Miura K.
    • Journal Title

      Protein Sci.

      Volume: 24(5) Issue: 5 Pages: 883-894

    • DOI

      10.1002/pro.2665

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Differential Effects of IFN-β on the Survival and Growth of Human Vascular Smooth Muscle and Endothelial Cells.2015

    • Author(s)
      Sano E, Tashiro S, Tsumoto K, Ueda T.
    • Journal Title

      Biores Open Access.

      Volume: 4(1) Issue: 1 Pages: 1-15

    • DOI

      10.1089/biores.2014.0052

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Structural basis for self-assembly of a cytolytic pore lined by protein and lipid2015

    • Author(s)
      Koji Tanaka, Jose M.M. Caaveiro, Koldo Morante, Juan Manuel Gonzalez-Manas and Kouhei Tsumoto
    • Journal Title

      Nature Communications

      Volume: 6 Issue: 1 Pages: 6337-6337

    • DOI

      10.1038/ncomms7337

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Thermodynamic and Structural Characterization of the Specific Binding of Zn(II) to Human Protein DJ-12014

    • Author(s)
      Shinya Tashiro, Jose M. M. Caaveiro, Chun-Xiang Wu, Quyen Q. Hoang, Kouhei Tsumoto
    • Journal Title

      Biochemistry

      Volume: 53(14) Issue: 14 Pages: 2218-2220

    • DOI

      10.1021/bi500294h

    • Related Report
      2014 Annual Research Report 2013 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] The staphylococcal elastin-binding protein regulates zinc-dependent growth/biofilm formation.2014

    • Author(s)
      M. Nakakido, C. Aikawa, I. Nakagawa, K. Tsumoto.
    • Journal Title

      The Journal of Biochemistry

      Volume: 156 Issue: 3 Pages: 155-162

    • DOI

      10.1093/jb/mvu027

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Peptide-dependent conformational fluctuation determines the stability of the human leukocyte antigen class Ⅰ complex2014

    • Author(s)
      Saeko Yanaka, Takamasa Ueno, Yi Shi, Jianxun Gi, George F. Gao, Kouhei Tsumoto, and Kenji Sugase
    • Journal Title

      J Biol Chem.

      Volume: 268 Issue: 35 Pages: 24680-90

    • DOI

      10.1074/jbc.m114.566174

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Grafting Synthetic Transmembrane Units to the Engineered Low-Toxicity alpha-Hemolysin to Restore Its Hemolytic Activity2014

    • Author(s)
      Mihoko Ui, Kousuke Harima, Toshiaki Takei, Kouhei Tsumoto, Kazuhito V. Tabata, Hiroyuki Noji, Sumire Endo, Kimio Akiyama, Takahiro Muraoka, and Kazushi Kinbara
    • Journal Title

      Molecular Biosystems

      Volume: 10 Issue: 12 Pages: 3199-3206

    • DOI

      10.1039/c4mb00405a

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Reversible Ion Transportation Switch by a Ligand-Gated Synthetic Supramolecular Ion Channel2014

    • Author(s)
      Takahiro Muraoka, Takahiro Endo, Kazuhito V. Tabata, Hiroyuki Noji, Satoru Nagatoishi, Kouhei Tsumoto, Rui Li and Kazushi Kinbara
    • Journal Title

      Journal of the American Chemical Society

      Volume: 136 Issue: 44 Pages: 15584-15595

    • DOI

      10.1021/ja5070312

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Role of Positions e and g in the Fibrous Assembly Formation of an Amphipathic alpha-Helix-Forming Polypeptide2014

    • Author(s)
      Takei, T.
    • Journal Title

      Biopolymers

      Volume: in press Issue: 3 Pages: 260-72

    • DOI

      10.1002/bip.22479

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystal structure of the capsular polysaccharide synthesizing protein CapE of Staphylococcus aureus2013

    • Author(s)
      Takamitsu Miyafusa, Jose M. M. Caaveiro, Yoshikazu Tanaka, Martin E. Tanner, Kouhei Tsumoto
    • Journal Title

      Bioscience Reports

      Volume: 33 Issue: 3 Pages: 463-474

    • DOI

      10.1042/bsr20130017

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Selective binding of antimicrobial porphyrins to the hame-receptor IsdH-NEAT3 of Staphylococcus aureus.2013

    • Author(s)
      Nhuan Vu
    • Journal Title

      Protein Science

      Volume: 22 Issue: 7 Pages: 942-953

    • DOI

      10.1002/pro.2276

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Effects of Chain Length of an Amphipathic Polypeptide Carrying the Repeated Amino Acid Sequence (LETLAKA)(n) on α-Helix and Fibrous Assembly Formation.2013

    • Author(s)
      Takei T., et al
    • Journal Title

      Biochemistry

      Volume: 52 Issue: 16 Pages: 2810-2820

    • DOI

      10.1021/bi400001c

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Bidirectional binding property of high glycine-tyrosine keratin-associated protein contributes to the mechanical strength and shape of hair2013

    • Author(s)
      Ryo Matsunaga, Ryota Abe, Daisuke Ishii, Shun-ichi Watanabe, Masato Kiyoshi, Bernd Nöcker, Masaru Tsuchiya, Kouhei Tsumoto
    • Journal Title

      Journal of Structural Biology

      Volume: 183 Issue: 3 Pages: 484-494

    • DOI

      10.1016/j.jsb.2013.06.005

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Hyperthin nanochains composed of self-polymerizing protein shackles2013

    • Author(s)
      Ryo Matsunaga, Saeko Yanaka, Satoru Nagatoishi, Kouhei Tsumoto
    • Journal Title

      Nature Communications

      Volume: 4 Issue: 1 Pages: 2211-2211

    • DOI

      10.1038/ncomms3211

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Heme binding mechanism of structurally similar iron-regulated surface determinant near transporter domains of Staphylococcus aureus exhibiting different affinities for heme.2013

    • Author(s)
      Yoshitaka Moriwaki
    • Journal Title

      Biochemistry

      Volume: 52 Issue: 49 Pages: 8866-8877

    • DOI

      10.1021/bi4008325

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] Basis of cell-membrane damage by a protein nanopore2016

    • Author(s)
      Jose M.M. Caaveiro、Koji Tanaka、Koldo Morante、Kouhei Tsumoto
    • Organizer
      Todai-Tsinghua Joint Workshop for Frontiers in Bioengineering and Biomedical Engineering
    • Place of Presentation
      東京大学(東京都文京区)
    • Year and Date
      2016-03-10
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Lipid-protein partnering during pore-formation of fragaceatoxinC2016

    • Author(s)
      Koldo Morante、Jose M.M. Caaveiro、Koji Tanaka、Kouhei Tsumoto
    • Organizer
      The Biophysical Society 60th Annual Meeting
    • Place of Presentation
      Los Angeles(U.S.A.)
    • Year and Date
      2016-02-28
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Structural and mechanistic basis of capsular polysaccharide-synthesizing enzymes CapE/CapF, and the route to discovery novel inhibitors with antibacterial properties2015

    • Author(s)
      Jose M.M. Caaveiro、Takamistsu Miyafusa、Takeru Chigira、Koichiro Nakano、Satoru Nagatoishi、Kouhei Tsumoto
    • Organizer
      The International Chemical Congress of Pacific Basin Societies 2015 (PacificChem)
    • Place of Presentation
      Honolulu, Hawaii(U.S.A.)
    • Year and Date
      2015-12-18
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Mechanism of self-assembly of a transmembrane pore triggered by specific biomembranes2015

    • Author(s)
      Koji Tanaka、Jose Caaveiro、Koldo Morante、Kouhei Tsumoto
    • Organizer
      The International Chemical Congress of Pacific Basin Societies 2015 (PacificChem)
    • Place of Presentation
      Honolulu, Hawaii(U.S.A.)
    • Year and Date
      2015-12-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Cell adhesion of human P-cadherin regulated by a Self-Chaperone mechanism2015

    • Author(s)
      Shota Kudo、Jose M.M. Caaveiro、Kouhei Tsumoto
    • Organizer
      9th Retreat Meeting of the IMSUT
    • Place of Presentation
      東京大学検見川セミナーハウス(千葉県千葉市花見川区)
    • Year and Date
      2015-10-29
    • Related Report
      2015 Annual Research Report
  • [Presentation] Biophysical cross-validation in fragment screening of fluorinated chemical library toward FBDD using SPR, ITC and 19F NMR2015

    • Author(s)
      Satoru Nagatoishi、Sou Yamaguchi、Keita Kajita、Etsuko Katoh、Hiroyuki Akiyama、Satoru Kanai、Toshio Furuya、Kouhei Tsumoto
    • Organizer
      The 43rd Symposium on Structural Activity Relationship 2015 The 10th Japan-China Joint Symposium on Drug Discovery and Development
    • Place of Presentation
      新潟日報メディアシップ日報ホール(新潟県新潟市)
    • Year and Date
      2015-09-28
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 低分子スクリーニングにおける熱量解析の活用2015

    • Author(s)
      長門石 曉
    • Organizer
      よこはまNMR研究会 第53 回ワークショップ
    • Place of Presentation
      理化学研究所横浜事業所(神奈川県横浜市鶴見区)
    • Year and Date
      2015-09-16
    • Related Report
      2015 Annual Research Report
  • [Presentation] 膜孔形成毒素の自己組織化に生体膜の組成とダイナミクスが与える影響の分子基盤2015

    • Author(s)
      津本 浩平 (代理:田中 耕路)、カアベイロ ホセ
    • Organizer
      第53回日本生物物理学会年会
    • Place of Presentation
      金沢大学角間キャンパス(石川県金沢市)
    • Year and Date
      2015-09-14
    • Related Report
      2015 Annual Research Report
  • [Presentation] The protein-protein interactions in highly concentrated antibody solution investigated by Raman spectroscopy.2015

    • Author(s)
      太田 周志、長門石 曉、野口 慎太郎、津本 浩平
    • Organizer
      第53回日本生物物理学会年会
    • Place of Presentation
      金沢大学角間キャンパス(石川県金沢市)
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] 抗リゾチームシングルドメイン抗体の抗原認識における熱力学的特性2015

    • Author(s)
      秋葉 宏樹、田村 浩子、木吉 真人、カアベイロ ホセ、津本 浩平
    • Organizer
      第9回バイオ関連化学シンポジウム
    • Place of Presentation
      熊本大学(熊本県熊本市)
    • Year and Date
      2015-09-10
    • Related Report
      2015 Annual Research Report
  • [Presentation] 金属イオンデリバリーのための抗金属錯体一本鎖抗体の開発とその性質解析2015

    • Author(s)
      秋葉 宏樹、吉田 良介、カアベイロ ホセ、津本 浩平
    • Organizer
      第31回日本DDS学会学術集会
    • Place of Presentation
      京王プラザホテル(東京都新宿区)
    • Year and Date
      2015-07-02
    • Related Report
      2015 Annual Research Report
  • [Presentation] 抗DOTA金属錯体抗体の一本鎖化とその分子認識メカニズムの解明2015

    • Author(s)
      秋葉 宏樹、吉田 良介、カアベイロ ホセ、津本 浩平
    • Organizer
      日本分子イメージング学会第10回学術集会
    • Place of Presentation
      タワーホール船堀(東京都江戸川区)
    • Year and Date
      2015-05-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] Staphylococcus aureus莢膜合成酵素CapFと低分子化合物の物理化学的な相互作用解析2014

    • Author(s)
      長門石曉、中納 広一郎、宮房 孝光、Caaveiro Jose、津本 浩平
    • Organizer
      第42回構造活性相関シンポジウム
    • Place of Presentation
      くまもと森都心プラザ(熊本県熊本市)
    • Year and Date
      2014-11-13 – 2014-11-14
    • Related Report
      2014 Annual Research Report
  • [Presentation] 毒素FraCが形成する蛋白質と脂質からなる膜孔構造2014

    • Author(s)
      田中耕路、Jose M.M. Caaveiro、Koldo Morante、Juan Manuel Gonzalez-Manas、津本浩平
    • Organizer
      日本結晶学会平成26年度年会
    • Place of Presentation
      東京大学(東京都文京区)
    • Year and Date
      2014-11-01 – 2014-11-03
    • Related Report
      2014 Annual Research Report
  • [Presentation] 物理化学的手法を用いたパーキンソン病関連蛋白質DJ-1と亜鉛間の結合解析2014

    • Author(s)
      田代晋也、 カアベイロ ホセ、Wu Chun-Xiang、Hoang Quyen、津本 浩平
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2014-11-01 – 2014-11-03
    • Related Report
      2014 Annual Research Report
  • [Presentation] 膜孔形成蛋白質FraCの構造変化機構の解析:可溶性構造から膜貫通構造までの変遷2014

    • Author(s)
      Koji Tanaka、Jose Caaveiro, Kouhei Tsumoto
    • Organizer
      第52回日本生物物理学会年会(BSJ2014)
    • Place of Presentation
      札幌コンベンションセンター(北海道札幌市)
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] 多機能性タンパク質PHB2のフォールディング状態に対する疎水環境の影響2014

    • Author(s)
      Takeru Chigira、Satoru Nagatoishi, Toyomasa Katagiri, Kouhei Tsumoto
    • Organizer
      第52回日本生物物理学会年会(BSJ2014)
    • Place of Presentation
      札幌コンベンションセンター(北海道札幌市)
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] 黄色ブドウ球菌由来の莢膜合成酵素CapFに結合する低分子化合物の解析2014

    • Author(s)
      長門石曉、中納 広一郎、宮房 孝光、Caaveiro Jose、津本 浩平
    • Organizer
      第8回バイオ関連化学シンポジウム
    • Place of Presentation
      岡山大学(岡山県岡山市)
    • Year and Date
      2014-09-11 – 2014-09-13
    • Related Report
      2014 Annual Research Report
  • [Presentation] 還元環境に応答して重合する蛋白質Protein shackleの開発2014

    • Author(s)
      松長遼、長門石曉、津本浩平
    • Organizer
      第8回バイオ関連化学シンポジウム
    • Place of Presentation
      岡山大学(岡山県岡山市)
    • Year and Date
      2014-09-11 – 2014-09-13
    • Related Report
      2014 Annual Research Report
  • [Presentation] 骨石灰化機構に関するプロテオグリカンOsteomodulinの物性解析2014

    • Author(s)
      田島卓実、長門石曉、Caaveiro Jose、工藤翔太、中木戸誠、大沼信一、津本浩平
    • Organizer
      第8回バイオ関連化学シンポジウム
    • Place of Presentation
      岡山大学(岡山県岡山市)
    • Year and Date
      2014-09-11 – 2014-09-13
    • Related Report
      2014 Annual Research Report
  • [Presentation] 化膿レンサ球菌由来Shr、Shpによるヘム輸送機構の物理化学的解析2014

    • Author(s)
      星野将人、Caaveiro Jose、長門石曉、中川一路、津本 浩平
    • Organizer
      第8回バイオ関連化学シンポジウム
    • Place of Presentation
      岡山大学(岡山県岡山市)
    • Year and Date
      2014-09-11 – 2014-09-13
    • Related Report
      2014 Annual Research Report
  • [Presentation] Structural Snapshots of the α-helical Pore-forming Toxin FraC Reveal The Molecular Basis Of Its Activation In Membranes.2014

    • Author(s)
      Koji Tanaka, Jose Caaveiro, Kouhei Tsumoto
    • Organizer
      The 28th annual symposium of The Protein Society
    • Place of Presentation
      Manchester Grand Hyatt(アメリカ合衆国/カリフォルニア州)
    • Year and Date
      2014-07-27 – 2014-07-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] Molecular basis of heme capture by Isd system of Staphylococcus aureus2014

    • Author(s)
      Jose Caaveiro, N. Vu, K. Morante, Y.Moriwaki, R. Abe, K. Tsumoto
    • Organizer
      The 28th annual symposium of The Protein Society
    • Place of Presentation
      Manchester Grand Hyatt(アメリカ合衆国/カリフォルニア州)
    • Year and Date
      2014-07-27 – 2014-07-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] Thermodynamic and structural characterization of the binding of Zn(II) and other molecules to human protein DJ-12014

    • Author(s)
      田代晋也、Caaveiro Jose、Chun-Xiang Wu、Quyen Hoang、津本浩平
    • Organizer
      The 28th annual symposium of The Protein Society
    • Place of Presentation
      Manchester Grand Hyatt(アメリカ合衆国/カリフォルニア州)
    • Year and Date
      2014-07-27 – 2014-07-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] パーキンソン病関連蛋白質DJ-1 の金属結合特異性に関する物理化学的解析2014

    • Author(s)
      田代晋也、Caaveiro Jose、Chun-Xiang Wu、Quyen Hoang、津本浩平
    • Organizer
      第12回次世代を担う若手のためのフィジカル・ファーマフォーラム
    • Place of Presentation
      箱根高原ホテル(神奈川県足柄下郡)
    • Year and Date
      2014-07-14 – 2014-07-15
    • Related Report
      2014 Annual Research Report
  • [Presentation] 特異的分子認識により重合する蛋白質の設計とその応用2014

    • Author(s)
      松長遼、長門石曉、津本浩平
    • Organizer
      第14回日本蛋白質科学会
    • Place of Presentation
      ワークピア横浜(神奈川県横浜市)
    • Year and Date
      2014-06-25 – 2014-06-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] 乳癌関連蛋白質BIG3とPHB2の物性解析2014

    • Author(s)
      千吉良岳、長門石曉、片桐豊雅、津本浩平
    • Organizer
      第14回日本蛋白質科学会
    • Place of Presentation
      ワークピア横浜(神奈川県横浜市)
    • Year and Date
      2014-06-25 – 2014-06-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] 機能制御を目指した疾患関連蛋白質Mint3の物性解析2014

    • Author(s)
      中山佳昭、田代晋也、長門石曉、坂本毅治、清木元治、津本浩平
    • Organizer
      第14回日本蛋白質科学会
    • Place of Presentation
      ワークピア横浜(神奈川県横浜市)
    • Year and Date
      2014-06-25 – 2014-06-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] Thermodynamic tools in the early stages of Drug Discovery2014

    • Author(s)
      Jose Caaveiro, A. Kobe, S. Tashiro, D. Kajihara, M. Kikkawa T. Mitani, K. Tsumoto
    • Organizer
      4th Asia-Pacific Protein Association
    • Place of Presentation
      ICC Jeju(韓国/済州島)
    • Year and Date
      2014-05-17 – 2014-05-20
    • Related Report
      2014 Annual Research Report
  • [Presentation] 生命分子相互作用解析:ITC とSPR2014

    • Author(s)
      長門石曉、津本浩平
    • Organizer
      日本薬学会第134年会
    • Place of Presentation
      くまもと県民交流会館パレアホール(熊本県熊本市)
    • Year and Date
      2014-03-27 – 2014-03-30
    • Related Report
      2013 Annual Research Report
  • [Presentation] 溶液中の動態から示される 難溶性蛋白質KAP8.1の構造と機能2014

    • Author(s)
      ガンバット ジャホラン、松長遼、秋葉宏樹、下村裕、新井修、 岩成宏子、浜窪隆雄、津本浩平
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋大学東山キャンパス( 愛知県名古屋市)
    • Year and Date
      2014-03-27 – 2014-03-30
    • Related Report
      2013 Annual Research Report
  • [Presentation] プロテオグリカンOsteomodulinの物理化学的解析2014

    • Author(s)
      田島卓実、中木戸誠、長門石曉、大沼信一、津本浩平
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋大学東山キャンパス( 愛知県名古屋市)
    • Year and Date
      2014-03-27 – 2014-03-30
    • Related Report
      2013 Annual Research Report
  • [Presentation] 多機能性タンパク質PHB2の物性解析2014

    • Author(s)
      千吉良岳、長門石曉、片桐豊雅、津本浩平
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋大学東山キャンパス( 愛知県名古屋市)
    • Year and Date
      2014-03-27 – 2014-03-30
    • Related Report
      2013 Annual Research Report
  • [Presentation] STRUCTURAL ANALYSIS OF THE PORE-FORMING TOXIN FRAC WITH MULTIPLE LIPIDS BOUND.2014

    • Author(s)
      Koji Tanaka, Jose M. M. Caaveiro, Koldo Morante, Juan Manuel Gonzalez-Manas, Kouhie Tsumoto
    • Organizer
      Biophysical Society 58th Annual Meeting
    • Place of Presentation
      Moscone Center (アメリカ合衆国/カリフォルニア州)
    • Year and Date
      2014-02-15
    • Related Report
      2013 Annual Research Report
  • [Presentation] 構造情報に基づくDJ-1二量体形成へのC末端モチーフの寄与の解明2013

    • Author(s)
      田代晋也、Jose M. M. Caaveiro、森脇由隆、Shulin Ju、Quyen Hoang、津本浩平
    • Organizer
      第36回分子生物学会
    • Place of Presentation
      神戸ポートアイランド(兵庫県神戸市)
    • Year and Date
      2013-12-03 – 2013-12-06
    • Related Report
      2013 Annual Research Report
  • [Presentation] 病原性細菌のHeme輸送システムを阻害する低分子化合物の探索2013

    • Author(s)
      長門石曉、下村拓矢、安部良太、星野将人、Jose Caaveiro、津本浩平
    • Organizer
      第4回スクリーニング学研究会
    • Place of Presentation
      東京大学伊藤謝恩ホール(東京都文京区)
    • Year and Date
      2013-11-29
    • Related Report
      2013 Annual Research Report
  • [Presentation] フラグメントライブラリーによる莢膜合成酵素CapFの阻害剤探索2013

    • Author(s)
      中納広一郎、宮房孝光、長門石曉、Jose Caaveiro、津本浩平
    • Organizer
      第4回スクリーニング学研究会
    • Place of Presentation
      東京大学伊藤謝恩ホール(東京都文京区)
    • Year and Date
      2013-11-29
    • Related Report
      2013 Annual Research Report
  • [Presentation] Protein shackle: A polymerizing scaffold for functional protein2013

    • Author(s)
      Ryo Matsunaga, Satoru Nagatoishi, Kouhei Tsumoto
    • Organizer
      5th Annual PEGS Europe
    • Place of Presentation
      Sheraton Lisboa Hotel & Spa (ポルトガル/リスボン)
    • Year and Date
      2013-11-04 – 2013-11-08
    • Related Report
      2013 Annual Research Report
  • [Presentation] Biophysical Approach of Fragment Screening to inhibit the heme transfer system of Pathogenic bacteria2013

    • Author(s)
      Satoru Nagatoishi, Takuya Shimomura, Ryota Abe, Masato Hoshino, Jose Caaveiro, Kouhei Tsumoto
    • Organizer
      CBI学会2013年大会
    • Place of Presentation
      タワーホール船堀(東京都江戸川区)
    • Year and Date
      2013-10-28 – 2013-10-31
    • Related Report
      2013 Annual Research Report
  • [Presentation] Inhibitor Screening of Capsular Polysaccharide Synthesizing Enzyme CapF from Staphylococcus aureus2013

    • Author(s)
      Koichiro Nakano, Takamitsu Miyafusa, Satoru Nagatoishi, Jose Caaveiro, Kouhei Tsumoto
    • Organizer
      CBI学会2013年大会
    • Place of Presentation
      タワーホール船堀(東京都江戸川区)
    • Year and Date
      2013-10-28 – 2013-10-31
    • Related Report
      2013 Annual Research Report
  • [Presentation] 分子間相互作用をミクロに捕らえる表面プラズモン共鳴法と熱測定の活用2013

    • Author(s)
      長門石曉、津本浩平
    • Organizer
      第17回コロイド・界面フォーラム
    • Place of Presentation
      KKR江の島ニュー向洋(神奈川県藤沢市)
    • Year and Date
      2013-07-18
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Actinoporin, FraCは二つの異なる基質-脂質と糖鎖を一つのポケットで認識する2013

    • Author(s)
      田中耕路、Jose M. M. Caaveiro, 津本浩平
    • Organizer
      第60回トキシンシンポジウム
    • Place of Presentation
      楓香荘(兵庫県宍粟市)
    • Year and Date
      2013-07-17 – 2013-07-19
    • Related Report
      2013 Annual Research Report
  • [Presentation] 黄色ブドウ球菌由来莢膜合成酵素CapF の補酵素取り込み機構に関する熱量解析2013

    • Author(s)
      中納広一郎、宮房孝光、Jose Manuel Martinez Caaveiro、長門石曉、津本浩平
    • Organizer
      第13回日本蛋白質科学会年会
    • Place of Presentation
      とりぎん文化会館(鳥取県鳥取市)
    • Year and Date
      2013-06-12 – 2013-06-14
    • Related Report
      2013 Annual Research Report
  • [Book] 実験医学 研究成果を薬につなげるアカデミア創薬の戦略と実例:化合物の“質”を評価する新しいスクリーニング系2014

    • Author(s)
      長門石曉、津本浩平
    • Total Pages
      220
    • Publisher
      羊土社
    • Related Report
      2014 Annual Research Report
  • [Book] 技術レポート2023:物理化学的スクリーニング技術による創薬戦略と展望2013

    • Author(s)
      長門石曉、津本浩平
    • Total Pages
      324
    • Publisher
      日本能率協会総合研究所
    • Related Report
      2013 Annual Research Report

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Published: 2013-05-15   Modified: 2017-05-10  

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