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Molecular and functional properties of Opn5

Research Project

Project/Area Number 25251036
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Animal physiology/Animal behavior
Research InstitutionKyoto University

Principal Investigator

Shichida Yoshinori  京都大学, 理学(系)研究科(研究院), 教授 (60127090)

Co-Investigator(Kenkyū-buntansha) IMAMOTO Yasushi  京都大学, 大学院理学研究科, 准教授 (80263200)
YAMASHITA Takahiro  京都大学, 大学院理学研究科, 助教 (50378535)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥47,320,000 (Direct Cost: ¥36,400,000、Indirect Cost: ¥10,920,000)
Fiscal Year 2015: ¥11,700,000 (Direct Cost: ¥9,000,000、Indirect Cost: ¥2,700,000)
Fiscal Year 2014: ¥11,700,000 (Direct Cost: ¥9,000,000、Indirect Cost: ¥2,700,000)
Fiscal Year 2013: ¥23,920,000 (Direct Cost: ¥18,400,000、Indirect Cost: ¥5,520,000)
Keywords光受容体 / オプシン / 機能多様性 / 分子メカニズム / モデル動物 / 光受容
Outline of Final Research Achievements

Animal photoreceptor proteins, opsins, have been widely diversified to acquire various new physiological functions in the course of molecular evolution. In this study, we have investigated the molecular properties of opsins in Opn5 group, one of the opsin groups that was most recently discovered in mammals, and found that they were diversified into not only UV- and visible-light absorbing receptors but also a reverse photoreceptor that loses G protein activation activity by light. We have also investigated localizations of Opn5 in eyes and brain and explored their functions by generating knock-out medaka fishes. The results indicated that some of the Opn5 subgroups would be responsible for uncharacterized physiological functions. Furthermore, we have investigated the molecular properties of opsins diversified in the vertebrate visual opsin group to obtain insights into molecular mechanisms underlying diversification in Opn5 group.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (28 results)

All 2016 2015 2014 2013 Other

All Int'l Joint Research (1 results) Journal Article (10 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 10 results,  Open Access: 3 results,  Acknowledgement Compliant: 4 results) Presentation (13 results) (of which Int'l Joint Research: 2 results,  Invited: 9 results) Book (3 results) Remarks (1 results)

  • [Int'l Joint Research] University of Tronto(Canada)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Origin of the low thermal isomerization rate of rhodopsin chromophore2015

    • Author(s)
      Yanagawa, M.; Kojima, K.; Yamashita, T.; Iwamoto, Y.; Matsuyama, T.; Nakanishi, K.; Yamano, Y.; Wada, A.; Sako, Y.; Shichida, Y.
    • Journal Title

      Sci. Rep.

      Volume: 5 Issue: 1 Pages: 11081-11081

    • DOI

      10.1038/srep11081

    • NAID

      120005690204

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Helical rearrangement of photoactivated rhodopsin in monomeric and dimeric forms probed by high-angle X-ray scattering.2015

    • Author(s)
      Imamoto Y, Kojima K, Oka T, Maeda R, Shichida Y
    • Journal Title

      Photochem. Photobiol. Sci.

      Volume: 14(11) Issue: 11 Pages: 1965-1973

    • DOI

      10.1039/c5pp00175g

    • NAID

      120005741088

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Diversification of non-visual photopigment parapinopsin in spectral sensitivity for diverse pineal functions2015

    • Author(s)
      M. Koyanagi, S. Wada, E. Kawano-Yamashita, Y. Hara, S. Kuraku, S. Kosaka, K. Kawakami, S. Tamotsu, H. Tsukamoto, Y. Shichida, A. Terakita
    • Journal Title

      BMC Biology

      Volume: 13 Issue: 1 Pages: 73-73

    • DOI

      10.1186/s12915-015-0174-9

    • NAID

      120005758203

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Diversity of active states in TMT opsins2015

    • Author(s)
      K. Sakai
    • Journal Title

      PLoS One

      Volume: 10 Issue: 10 Pages: 1-12

    • DOI

      10.1371/journal.pone.0141238

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Intramolecular interactions that induce helical rearrangement upon rhodopsin activation: Light-induced structural changes in metarhodopsin IIa probed by cysteine S-H stretching vibrations2014

    • Author(s)
      Y. Yamazaki, T. Nagata, A. Terakita, H. Kandori, Y. Shichida, Y. Imamoto*
    • Journal Title

      J. Biol. Chem

      Volume: 289 Issue: 20 Pages: 13792-13800

    • DOI

      10.1074/jbc.m113.527606

    • NAID

      120005741087

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Contribution of glutamic acid in the conserved E/DRY triad to the functional properties of rhodopsin.2014

    • Author(s)
      Sato, K., Yamashita, T., and Shichida, Y.
    • Journal Title

      Biochemistry

      Volume: 53 Issue: 27 Pages: 4420-4425

    • DOI

      10.1021/bi5003772

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Ligand-induced population shift leads to the activation of rhodopsin, a G-protein coupled receptor2014

    • Author(s)
      Maeda, R., Hiroshima, M., Yamashita, T., Wada, A., Nishimura, S., Sako, Y., Shichida, Y., and Imamoto, Y
    • Journal Title

      Biophys. J

      Volume: 106 (4) Issue: 4 Pages: 915-924

    • DOI

      10.1016/j.bpj.2014.01.020

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Rod visual pigment optimizes active state to achieve efficient G protein activation as compared to cone visual pigments2014

    • Author(s)
      Kojima, K., Imamoto, Y., Maeda, R., Yamashita, T., and Shichida, Y
    • Journal Title

      J. Biol. Chem

      Volume: 289 (8) Issue: 8 Pages: 5061-5073

    • DOI

      10.1074/jbc.m113.508507

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Different phosphorylation rates among vertebrate cone visual pigments with different spectral sensitivities2013

    • Author(s)
      Tsutsui, K., Tachibanaki, S., Shimauchi-Matsukawa, Y., Shichida, Y., and Kawamura, S.
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 440 Issue: 4 Pages: 630-634

    • DOI

      10.1016/j.bbrc.2013.09.118

    • NAID

      120005353493

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Chloride-dependent spectral tuning mechanism of L-group cone visual pigments2013

    • Author(s)
      Takahiro Yamashita
    • Journal Title

      Biochemistry

      Volume: 52 Issue: 7 Pages: 1192-1197

    • DOI

      10.1021/bi3016058

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] Thermal isomerization of chromophore in rod and cone visual pigments2015

    • Author(s)
      Y. Shichida
    • Organizer
      Pacifichem 2015
    • Place of Presentation
      Honolulu, USA
    • Year and Date
      2015-12-19
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular evolution of the low thermal isomerization rate of rhodopsin chromophore2015

    • Author(s)
      Y. Shichida
    • Organizer
      7th AOCP
    • Place of Presentation
      Taipei, Taiwan
    • Year and Date
      2015-11-18
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 哺乳類光受容タンパク質Opn5の分子特性と発現部位の解析2015

    • Author(s)
      山下高廣、小野勝彦、大内淑代、湯本茜、後藤仁志、友成さゆり、酒井佳寿美、藤田洋史、今元泰、野地澄晴、中村克樹、七田芳則
    • Organizer
      日本動物学会大86回大会
    • Place of Presentation
      新潟
    • Year and Date
      2015-09-17
    • Related Report
      2015 Annual Research Report
  • [Presentation] 光受容体Opn5L1を発現する細胞の性質2015

    • Author(s)
      春木慶洸、佐藤恵太、山下高廣、大内淑代、後藤仁志、小野勝彦、友成さゆり、酒井佳寿美、安齋賢、木下政人、七田芳則
    • Organizer
      日本動物学会大86回大会
    • Place of Presentation
      新潟
    • Year and Date
      2015-09-17
    • Related Report
      2015 Annual Research Report
  • [Presentation] 魚類における光受容タンパク質Opn5mの組織局在2015

    • Author(s)
      佐藤恵太、山下高廣、春木慶洸、木下政人、大内淑代、七田芳則
    • Organizer
      日本動物学会大86回大会
    • Place of Presentation
      新潟
    • Year and Date
      2015-09-17
    • Related Report
      2015 Annual Research Report
  • [Presentation] Opn5L1は光サイクル性の反応で制御されるGタンパク質共役型受容体である2015

    • Author(s)
      佐藤恵太、山下高廣、大内淑代、友成さゆり、酒井佳寿美、今元泰、和田昭盛、七田芳則
    • Organizer
      日本生物物理学会第53回年会
    • Place of Presentation
      金沢
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 脊椎動物の非視覚オプシンOpn5の分子特性の多様性2014

    • Author(s)
      山下高廣
    • Organizer
      日本生物物理学会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 非補修類脊椎動物が持つ光受容タンパク質Opn5L1の光不活性化2014

    • Author(s)
      佐藤恵太、山下高廣、大内淑代、友成さゆり、湯本茜、柳林彩理、酒井佳寿美、野地澄晴、七田芳則
    • Organizer
      日本動物学会
    • Place of Presentation
      東北大学
    • Year and Date
      2014-09-10 – 2014-09-13
    • Related Report
      2014 Annual Research Report
  • [Presentation] Molecular properties and functional diversity of rod and cone visual pigments2013

    • Author(s)
      Y. Shichida
    • Organizer
      8th Asian Biophysics Association
    • Place of Presentation
      Jeju, Korea
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Functional diversity of opsins2013

    • Author(s)
      Y. Shichida
    • Organizer
      FASEB meeting
    • Place of Presentation
      Steamboat, Colofado, USA
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Molecular evolution and functional diversity of opsins2013

    • Author(s)
      Y. Shichida
    • Organizer
      15th Congress of the European Society for Photobiology
    • Place of Presentation
      Liege, Belgium
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Functional diversity of opsins2013

    • Author(s)
      Y. Shichida
    • Organizer
      The 6th Asia & Oceania Conference on Photobiology
    • Place of Presentation
      Sydney, Australia
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] ロドプシン研究の新しい流れ2013

    • Author(s)
      七田芳則
    • Organizer
      日本生物物理学会第51回年会
    • Place of Presentation
      京都
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Book] 光と生命の辞典2016

    • Author(s)
      七田芳則
    • Total Pages
      422
    • Publisher
      朝倉書店
    • Related Report
      2015 Annual Research Report
  • [Book] Vertebrate Photoreceptors2014

    • Author(s)
      Sato, K. and Shichida, Y.
    • Total Pages
      349
    • Publisher
      Springer
    • Related Report
      2014 Annual Research Report
  • [Book] Evolution and Senses2013

    • Author(s)
      Y. Shichida, T. Yamashita
    • Total Pages
      46
    • Publisher
      Springer, Heidelberg
    • Related Report
      2013 Annual Research Report
  • [Remarks] 七田研ホームページ

    • URL

      http://photo1.biophys.kyoto-u.ac.jp/shichida/home_jp.html

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report

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Published: 2013-05-15   Modified: 2019-07-29  

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