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Antiviral innate immunity in phytopathogenic fungi

Research Project

Project/Area Number 25252011
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Plant protection science
Research InstitutionOkayama University

Principal Investigator

SUZUKI Nobuhiro  岡山大学, 資源植物科学研究所, 教授 (70206514)

Co-Investigator(Kenkyū-buntansha) 中屋敷 均  神戸大学, (連合)農学研究科(研究院), 教授 (50252804)
近藤 秀樹  岡山大学, その他部局等, 准教授 (40263628)
Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥45,760,000 (Direct Cost: ¥35,200,000、Indirect Cost: ¥10,560,000)
Fiscal Year 2016: ¥11,570,000 (Direct Cost: ¥8,900,000、Indirect Cost: ¥2,670,000)
Fiscal Year 2015: ¥11,960,000 (Direct Cost: ¥9,200,000、Indirect Cost: ¥2,760,000)
Fiscal Year 2014: ¥11,830,000 (Direct Cost: ¥9,100,000、Indirect Cost: ¥2,730,000)
Fiscal Year 2013: ¥10,400,000 (Direct Cost: ¥8,000,000、Indirect Cost: ¥2,400,000)
Keywords植物病原糸状菌 / RNAサイレンシング / RNAi / マイコウイルス / dsRNA / 自然免疫 / マイコイミュニティ / 抗ウイルス防御反応 / RNA サイレンシング / 菌類ウイルス / 宿主免疫 / クリ胴枯病菌 / イネいもち病菌 / 白紋羽病菌 / ヴァイロコントロール / RNAサイレンシング抑制蛋白質
Outline of Final Research Achievements

The objective of this project is to explore RNA silencing (RNAi) as the antiviral innate defense against fungal viruses in plant pathogenic filamentous fungi. Consequently, a great progress has been made, leading to breakthroughs: 1) Discovery of RNAi mediated antiviral defense that requires Dicer but not AGO in Cryphonectria parasitica, 2) Detection of inhibitory effects on RNA silencing activities against RNA and DNA viruses, and transgenes in Pyricularia oryzae, 3) Development of a screening protocol for host factors required for virus perception through transcription induction of key genes of RNAi upon virus infection in C. parasitica, 4) Identification of the SAGA complex as a transcriptional regulator of fungal RNA silencing. These findings will bring about a paradigm shift in RNAi. Fungi are now established as the third position next to animals and plants in antiviral defense research. Note that most of the obtained data were published in international, high-quality journals.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (36 results)

All 2017 2016 2015 2014 2013 Other

All Journal Article (15 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 15 results,  Open Access: 5 results,  Acknowledgement Compliant: 6 results) Presentation (17 results) (of which Int'l Joint Research: 5 results,  Invited: 9 results) Remarks (4 results)

  • [Journal Article] Harnessing host ROS-generating machinery for the robust genome replication of a plant RNA virus.2017

    • Author(s)
      Hyodo K, Hashimoto K, Kuchitsu K, Suzuki N, Okuno T
    • Journal Title

      Proceedings of the National Academy of Science, U.S.A.

      Volume: 114 Issue: 7 Pages: 1282-1290

    • DOI

      10.1073/pnas.1610212114

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Characterization of a new megabirnavirus conferring hypovirulence with the aid of a co-infecting partitivirus to the host fungus, Rosellinia necatrix.2016

    • Author(s)
      Sasaki, A., Nakamura, H., Suzuki, N., Kanematsu, S.
    • Journal Title

      Virus Research

      Volume: 219 Pages: 73-82

    • DOI

      10.1016/j.virusres.2015.12.009

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] The victorivirus Helminthosporium victoriae virus 190S is the primary cause of disease/hypovirulence in the natural and a heterologous host.2016

    • Author(s)
      Xie, J., Havens, W. M., Koloniuk, I., Lin, Y.-H., Suzuki, N., and Ghabrial, S. A.
    • Journal Title

      Virus Research

      Volume: 219 Pages: 100-107

    • DOI

      10.1016/j.virusres.2015.12.011

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Sequence and phylogenetic analyses of novel totivirus-like double-stranded RNAs from field-collected powdery mildew fungi2016

    • Author(s)
      Kondo, H., Hisano, S., Chiba, S., Maruyama K, Andika IB, Toyoda, K., Fujimori, F. and Suzuki, N.
    • Journal Title

      Virus Research

      Volume: 213 Pages: 353-364

    • DOI

      10.1016/j.virusres.2015.11.015

    • NAID

      120006732633

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] A novel betapartitivirus RnPV6 tolerate host RNA silencing but is interfered by its defective- RNAs.2016

    • Author(s)
      Chiba, S., Lin, Y.-H., Zhang, Kondo, H., Kanematsu, S., and Suzuki, N.
    • Journal Title

      Virus Research

      Volume: in press Pages: 62-72

    • DOI

      10.1016/j.virusres.2015.10.017

    • Related Report
      2016 Annual Research Report 2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Highly activated RNA silencing via strong induction of dicer by one virus can interfere with the replication of an unrelated virus.2015

    • Author(s)
      Chiba, S. and Suzuki, N.
    • Journal Title

      Proceedings of the National Academy of Science, U S A

      Volume: 112 Issue: 35 Pages: 4911-8211

    • DOI

      10.1073/pnas.1509151112

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Megabirnavirus structure reveals a putative 120-subunit capsid formed by asymmetrical dimers with distinctive large protrusions.2015

    • Author(s)
      Miyazaki N, Salaipeth L, Kanematsu S, Iwasaki K, Suzuki N
    • Journal Title

      Journal of General Virology

      Volume: 98 Issue: 8 Pages: 2435-2441

    • DOI

      10.1099/vir.0.000182

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Differential contributions of plant Dicer-like proteins to antiviral defences against potato virus X in leaves and roots2015

    • Author(s)
      Andika, I. B., Maruyama, K., Sun, L., Kondo, H., Tamada, T., and Suzuki N.
    • Journal Title

      Plant J.

      Volume: 81 Issue: 5 Pages: 781-793

    • DOI

      10.1111/tpj.12770

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The chestnut blight fungus for studies on virus/host and virus/virus interactions: from a natural to a model host.2015

    • Author(s)
      Eusebio-Cope, A., Sun, L., Tanaka, T., Chiba, C., Kasahara, S., and Suzuki, N.
    • Journal Title

      Virology

      Volume: 477 Pages: 164-175

    • DOI

      10.1016/j.virol.2014.09.024

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mycoreovirus genome rearrangements associated with RNA silencing deficiency.2015

    • Author(s)
      Eusebio-Cope, A., and Suzuki, N.
    • Journal Title

      Nucleic Acids Research

      Volume: 43 Issue: 7 Pages: 3802-3813

    • DOI

      10.1093/nar/gkv239

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Genome rearrangement of a mycovirus Rosellinia necatrix megabirnavirus 1 affecting its ability to attenuate virulence of the host fungus.2014

    • Author(s)
      Kanematsu S, Shimizu T, Salaipeth L, Yaegashi H, Sasaki A, Ito T, Suzuki N
    • Journal Title

      Virology

      Volume: 450-451 Pages: 308-315

    • DOI

      10.1016/j.virol.2013.12.002

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Biological properties and expression strategy of Rosellinia necatrix megabirnavirus 1 in an experimental host Cryphonectria parasitica.2014

    • Author(s)
      Salaipeth, L., Eusebio-Cope, A., Chiba, S., Kanematsu, S. and Suzuki N.
    • Journal Title

      Journal of General Virology

      Volume: 95 Issue: 3 Pages: 740-750

    • DOI

      10.1099/vir.0.058164-0

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A novel victorivirus from a phytopathogenic fungus, Rosellinia necatrix is infectious as particles and targeted by RNA silencing.2013

    • Author(s)
      Chiba, S., Lin, Y.-H., Kondo, H., Kanematsu, S and Suzuki N.
    • Journal Title

      Journal of Virology

      Volume: 87 Issue: 12 Pages: 6727-6738

    • DOI

      10.1128/jvi.00557-13

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Effects of defective-interfering RNA on symptom induction and replication of a novel partitivirus from a phytopathogenic fungus Rosellinia necatrix.2013

    • Author(s)
      Chiba, S., Lin, Y-H., *Kondo, H., Kanematsu, S., and Suzuki, N.
    • Journal Title

      Journal of Virology

      Volume: 87 Issue: 4 Pages: 2330-2341

    • DOI

      10.1128/jvi.02835-12

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A second quadrivirus strain from a phytopathogenic filamentous fungus, Rosellinia necatrix.2013

    • Author(s)
      Lin, Y.-H., Hisano, S., Yaegashi, H., Kanematsu, S and Suzuki N.
    • Journal Title

      Archives of Virology

      Volume: 158 Issue: 5 Pages: 1093-1098

    • DOI

      10.1007/s00705-012-1580-8

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] Fungal RNA silencing involved in antiviral defense and RNA recombination.2016

    • Author(s)
      Suzuki, N.
    • Organizer
      ASV 2016 Annual Meeting
    • Place of Presentation
      Virginia Polytechnic Institute, Blacksburg, VA, USA
    • Year and Date
      2016-06-18
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Antiviral defense in the phytopathogenic filamentous ascomycete, Cryphonectria parasitica.2016

    • Author(s)
      Suzuki, N.
    • Organizer
      Swiss Society for Microbiology Annual Assembly and Meeting
    • Place of Presentation
      Bern, Switzerland
    • Year and Date
      2016-06-13
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] NAサイレンシング活性化による異種菌類ウイルス間の干渉作用(I)2016

    • Author(s)
      千葉 壮太郎1,2・鈴木 信弘
    • Organizer
      H28年度日本植物病理学会大会
    • Place of Presentation
      岡山コンベンションセンター
    • Year and Date
      2016-03-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] ダイサー遺伝子の発現誘導で活性化されたRNAサイレンシングによる別種ウイルス間の干渉効果2015

    • Author(s)
      千葉壮太郎,鈴木信弘
    • Organizer
      日本分子生物学会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Highly activated RNA silencing via strong induction of dicer by one virus can interfere with the replication of an unrelated virus.2015

    • Author(s)
      Chiba, S., and Suzuki, N.
    • Organizer
      The 63rd Annual Meeting of the Japanese Society of Virology
    • Place of Presentation
      Fukuoka International Congress Center,
    • Year and Date
      2015-11-22
    • Related Report
      2015 Annual Research Report
  • [Presentation] A new virus life style challenging the virus rules and concepts.2015

    • Author(s)
      R. Zhang, S. Hisano, A. Tani, H. Kondo, S. Kanematsu, N. Suzuki
    • Organizer
      63rd Annual Meeting of the Japanese Society for Virology
    • Place of Presentation
      Fukuoka International Congress Center,
    • Year and Date
      2015-11-22
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] A new virus lifestyle challenging the virus rules and concepts.2015

    • Author(s)
      Suzuki, N
    • Organizer
      JICA Africa-ai-Japan Project/JSPS-AASP Sponsored Workshop on Plant Science and Resource Innovative Research Core with Pan African University.
    • Place of Presentation
      Jomo Kenyatta University of Agriculture and Technology, Juja, Kenya.
    • Year and Date
      2015-10-19
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] From virology to plant disease control2015

    • Author(s)
      Suzuki, N
    • Organizer
      JSPS Core-to-Core Program Sponsored Workshop on Crop Science and Innovation for Agriculture
    • Place of Presentation
      Makerere University, Uganda.
    • Year and Date
      2015-10-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] A new virus life style challenging the virus rules and concepts.2015

    • Author(s)
      Zhang, R., Hisano, S., Tani, A., Kondo, H., Kanematsu, S., and Suzuki, N.
    • Organizer
      13th Spanish Virology Congress
    • Place of Presentation
      Fábrica Nacional de Moneda y Timbre - Real Casa de la Moneda, Madrid, Spain.
    • Year and Date
      2015-06-07
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Virus interference in plants and fungal hosts.2014

    • Author(s)
      Suzuki N.
    • Organizer
      9th JKUAT Scientific and Technological Conference
    • Place of Presentation
      JKUAT, Juja, Kenya
    • Year and Date
      2014-11-13 – 2014-11-14
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] The first evidence for internal ribosomal entry sites in mycovirus genomes.2014

    • Author(s)
      Chiba, S. Jamal, A., Tanaka, T., Kondo, H. and Suzuki, N.
    • Organizer
      Third International Mycovirus Symposium,
    • Place of Presentation
      UVM, Burlington, USA.
    • Year and Date
      2014-08-02 – 2014-08-05
    • Related Report
      2014 Annual Research Report
  • [Presentation] Transfection of the megabirnavirus RnMBV1 into a model filamentous fungus, Cryphonectria parasitica: biological significance and expression strategies.2014

    • Author(s)
      Salaipeth, L., Chiba, S., Eusebio-Cope, A., Kanematsu, S., Suzuki, N.
    • Organizer
      16th International Congress of Virology
    • Place of Presentation
      Montreal, Canada.
    • Year and Date
      2014-07-27 – 2014-08-01
    • Related Report
      2014 Annual Research Report
  • [Presentation] The chestnut blight fungus for studies on virus/host and virus/virus interactions: from a natural to a model host.2014

    • Author(s)
      Suzuki N.
    • Organizer
      EMBO Conference Viruses of microbes III: Structure and function, from molecules to communities.
    • Place of Presentation
      ETH Zurich,
    • Year and Date
      2014-07-14 – 2014-07-18
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Effects of defective-interfering RNA on symptom induction by, and replication of, a novel partitivirus from a phytopathogenic fungus Rosellinia necatrix.2013

    • Author(s)
      Chiba, S., Lin, Y.-H., Kondo, H., Kanematsu, S and Suzuki N.
    • Organizer
      The 32nd Annual Meeting of American Society for Virology
    • Place of Presentation
      State College, Pennsylvania, USA.
    • Related Report
      2013 Annual Research Report
  • [Presentation] A novel victorivirus from a phytopathogenic fungus, Rosellinia necatrix is infectious as particles and targeted by RNA silencing.2013

    • Author(s)
      Suzuki N., Lin, Y.-H., Kondo, H., Kanematsu, S and Chiba, S.
    • Organizer
      The 32nd Annual Meeting of American Society for Virology
    • Place of Presentation
      State College, Pennsylvania, USA.
    • Related Report
      2013 Annual Research Report
  • [Presentation] Mycovirus replication and symptom induction in an RNAi-defective strain of an experimental fungal host.2013

    • Author(s)
      Chiba, S., Lin, Y.-H., Kondo, H., Kanematsu, S and Suzuki N.
    • Organizer
      The Annual Meeting of the Kansai Regional Branch of Japanese Phytopathological Society.
    • Place of Presentation
      Okayama, Japan
    • Related Report
      2013 Annual Research Report
  • [Presentation] Extension of the host range of and analysis of host interactions of a novel victorivirus.2013

    • Author(s)
      Chiba, S., Lin, Y.-H., Kondo, H., Kanematsu, S and Suzuki N.
    • Organizer
      61st Annual Meeting of the Japanese Society for Virology
    • Place of Presentation
      Kobe, JAPAN
    • Related Report
      2013 Annual Research Report
  • [Remarks] 植物微生物相互作用グループ研究業績

    • URL

      http://www.rib.okayama-u.ac.jp/pmi/publication.html

    • Related Report
      2015 Annual Research Report
  • [Remarks] 白紋羽病菌の潜在的ヴァイロコントロール因子のゲノム再編成。

    • URL

      http://www.rib.okayama-u.ac.jp/researchactivity/140409-1.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] 白紋羽病菌の潜在的ヴァイロコントロール因子がクリ胴枯病菌でも効果あり。

    • URL

      http://www.rib.okayama-u.ac.jp/researchactivity/140313-1.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] ウイルスのモデル糸状菌宿主としてのクリ胴枯病菌

    • URL

      http://www.rib.okayama-u.ac.jp/researchactivity/20150420.html

    • Related Report
      2014 Annual Research Report

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Published: 2013-05-15   Modified: 2019-07-29  

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