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Extraction of Latent Structure from Imaging Data Using Markov Random Field Models

Research Project

Project/Area Number 25280090
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Soft computing
Research InstitutionThe University of Tokyo

Principal Investigator

Okada Masato  東京大学, 新領域創成科学研究科, 教授 (90233345)

Co-Investigator(Kenkyū-buntansha) 永田 賢二  東京大学, 新領域創成科学研究科, 助教 (10556062)
桑谷 立  国立研究開発法人海洋研究開発機構, 地球内部物質循環研究分野, 研究員 (60646785)
赤井 一郎  熊本大学, パルスパワー科学研究所, 教授 (20212392)
Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥16,120,000 (Direct Cost: ¥12,400,000、Indirect Cost: ¥3,720,000)
Fiscal Year 2016: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Fiscal Year 2015: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Fiscal Year 2014: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Fiscal Year 2013: ¥6,370,000 (Direct Cost: ¥4,900,000、Indirect Cost: ¥1,470,000)
Keywords画像処理 / ベイズ推論 / イメージング / 潜在構造 / ビッグデータ / 潜在構想
Outline of Final Research Achievements

The purpose of this research was to propose an algorithm to extract latent structure from imaging data. As an initial objective, we proposed an algorithm that automatically estimates filter width using hyper-parameter of MRF model, clarified correspondence between MRF model and reaction diffusion equation, and proposed algorithm to estimate hyper-parameter distribution. Furthermore, we developed the method to analytically evaluate distribution estimation, and evaluated the influence of downsampling of the image data.
We applied extraction of latent structure to analysis using MRF model of data in Earth and geological sciences. We also applied extraction of latent structure from the STM / STS data of the physical science, using LASSO which is a method based on sparse modeling.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (31 results)

All 2017 2016 2015 2014 2013

All Journal Article (10 results) (of which Peer Reviewed: 10 results,  Open Access: 5 results,  Acknowledgement Compliant: 5 results) Presentation (21 results) (of which Int'l Joint Research: 3 results)

  • [Journal Article] Theory of distribution estimation of hyperparameters in Markov random field models2016

    • Author(s)
      Sakamoto Hirotaka, Nakanishi-Ohno Yoshinori and Masato Okada
    • Journal Title

      Journal of Physical Society of Japan

      Volume: 85(6) Issue: 6 Pages: 1-4

    • DOI

      10.7566/jpsj.85.063801

    • NAID

      40020851820

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Bayesian Analysis of an Excitonic Absorption Spectrum in a Cu2O Thin Film Sandwiched by Paired MgO Plates2016

    • Author(s)
      K. Iwamitsu, S. Aihara, M. Okada, I. Akai
    • Journal Title

      J. Phys. Soc. Japan

      Volume: 85 Issue: 9 Pages: 1-4

    • DOI

      10.7566/jpsj.85.094716

    • NAID

      210000134099

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Geodetic inversion for spatial distribution of slip under smoothness, discontinuity, and sparsity constraints2016

    • Author(s)
      Ryoko Nakata, Tatsu Kuwatani, Masato Okada, Takane Hori
    • Journal Title

      Earth, Planets and Space

      Volume: 68 Issue: 1

    • DOI

      10.1186/s40623-016-0396-2

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Phase shifts in alpha-frequency rhythm detected in electroencephalograms influence reaction time2015

    • Author(s)
      Yasushi Naruse, Ken Takiyama, Masato Okada, Hiroaki Umehara, Yutaka Sakaguchi
    • Journal Title

      Neural Networks

      Volume: 62 Pages: 47-51

    • DOI

      10.1016/j.neunet.2014.07.012

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Markov-random-field modeling for linear seismic tomography2014

    • Author(s)
      Tatsu Kuwatani, Kenji Nagata, Masato Okada, Mitsuhiro Toriumi
    • Journal Title

      Physical Review E

      Volume: 90 Issue: 4

    • DOI

      10.1103/physreve.90.042137

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Distribution estimation of hyperparameters in Markov random field models2014

    • Author(s)
      Yoshinori Nakanishi-Ohno, Kenji Nagata, Hayaru Shouno, Masato Okada
    • Journal Title

      Journal of Physics A : Mathematical and Theoretical

      Volume: Vol.81 Issue: 4 Pages: 45001-45001

    • DOI

      10.1088/1751-8113/47/4/045001

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Markov random field modeling for mapping geofluid distributions from seismic velocity structures2014

    • Author(s)
      Tatsu Kuwatani, Kenji Nagata, Masato Okada, Mitsuhiro Toriumi
    • Journal Title

      Earth, Planets and Space

      Volume: 66 Issue: 1 Pages: 1-9

    • DOI

      10.1186/1880-5981-66-5

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Sparse Estimation of Spike-Triggered Average2014

    • Author(s)
      Shimpei Yotsukura, Toshiaki Omori, Kenji Nagata and Masato Okada
    • Journal Title

      IPSJ Online Transactions

      Volume: 7 Issue: 0 Pages: 52-58

    • DOI

      10.2197/ipsjtrans.7.52

    • NAID

      130003394613

    • ISSN
      1882-6660
    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Sparse coding of harmonic vocalization in monkey auditory cortex2013

    • Author(s)
      Hiroki Terashima, Haruo Hosoya, Toshiki Tani, Noritaka Ichinohe, Masato Okada
    • Journal Title

      Neurocomputing

      Volume: 103 Pages: 14-21

    • DOI

      10.1016/j.neucom.2012.07.009

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Statistical method for detecting phase shifts in alpha rhythm from human electroencephalogram data2013

    • Author(s)
      Naruse, Y., Takiyama, K., Okada, M. and Umehara,H.
    • Journal Title

      Physical Review E

      Volume: 87 Issue: 4 Pages: 42708-42708

    • DOI

      10.1103/physreve.87.042708

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] ベイズ推定によるCu2O薄膜における励起子発光のスペクトル分解2017

    • Author(s)
      切通愛莉紗, 堤優太, 郡司昂弥, 相原慎吾, 岩満一功, 徳田悟, 岡田真人, 赤井一郎
    • Organizer
      日本物理学会第72回年次大会
    • Place of Presentation
      大阪大学豊中キャンパス
    • Year and Date
      2017-03-19
    • Related Report
      2016 Annual Research Report
  • [Presentation] 境界条件を持たないマルコフ確率場モデルのハイパーパラメータ分布推定2017

    • Author(s)
      片上瞬,坂本浩隆,村田伸,岡田真人
    • Organizer
      日本物理学会第72回年次大会
    • Place of Presentation
      大阪大学豊中キャンパス
    • Year and Date
      2017-03-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] ベイズ推定によるCu2O薄膜における励起子発光のスペクトル分解2016

    • Author(s)
      切通愛莉紗,堤 優太,郡司昂弥,相原慎吾,岩満一功, 徳田 悟,岡田真人, 赤井一郎
    • Organizer
      第27回光物性研究会
    • Place of Presentation
      神戸大学 百年記念会館 六甲台第2キャンパス
    • Year and Date
      2016-12-02
    • Related Report
      2016 Annual Research Report
  • [Presentation] 周期的境界条件を持たないガウスマルコフ確率場モデル2016

    • Author(s)
      片上瞬,坂本浩隆,村田伸,岡田真人
    • Organizer
      IBIS2016
    • Place of Presentation
      京都大学吉田キャンパス
    • Year and Date
      2016-11-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] マルコフ確率場モデルを用いたベイズ画像解析に対する平均操作の影響2016

    • Author(s)
      坂本浩隆,中西(大野)義典,岡田真人
    • Organizer
      日本人工知能学会第30回全国大会
    • Place of Presentation
      北九州国際会議
    • Year and Date
      2016-06-09
    • Related Report
      2016 Annual Research Report
  • [Presentation] Geodetic data inversion for spatial distribution of slip under smoothness, discontinuity, and sparsity constraints2015

    • Author(s)
      Nakata, R., Kuwatani, T., Okada, M., Hori, T.
    • Organizer
      International Meeting on “High-Dimensional Data Driven Science (HD3-2015)
    • Place of Presentation
      Merparque Kyoto, Kyoto, Japan
    • Year and Date
      2015-12-16
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Bayesian hyper-parameter estimation on Markov random field influenced by using image data of low quality2015

    • Author(s)
      Sakamoto, H., Nakanishi-Ohno, Y. and Okada, M.
    • Organizer
      International Meeting on “High-Dimensional Data Driven Science” (HD3-2015)
    • Place of Presentation
      Merparque Kyoto, Kyoto, Japan
    • Year and Date
      2015-12-16
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 疎性モデリングを用いたすべり分布のインバージョン2015

    • Author(s)
      中田令子,桑谷立,岡田真人,堀高峰
    • Organizer
      日本地震学会秋季大会
    • Place of Presentation
      神戸国際会議場(神戸)
    • Year and Date
      2015-10-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] 画像データに関する観測回数と観測精度のトレードオフ2015

    • Author(s)
      坂本浩隆,中西(大野)義典,岡田真人
    • Organizer
      第25回日本神経回路学会全国大会
    • Place of Presentation
      電気通信大学(東京都)
    • Year and Date
      2015-09-04
    • Related Report
      2015 Annual Research Report
  • [Presentation] Improvement in reproducibility of spatial distribution of afterslip in geodetic data inversion2015

    • Author(s)
      Nakata, R., Kuwatani, T., Okada, M., Hori, T.
    • Organizer
      AOGS2015
    • Place of Presentation
      Suntec Singapore Convention & Exhibition Centre, Suntec City, Singapore
    • Year and Date
      2015-08-05
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 疎性モデリングを用いた余効すべりのインバージョン2015

    • Author(s)
      中田令子,桑谷立,岡田真人,堀高峰
    • Organizer
      日本地球惑星科学連合大会
    • Place of Presentation
      幕張メッセ(千葉)
    • Year and Date
      2015-05-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] 分布推定を用いたマルコフ確率場モデルにおける観測の最適化2015

    • Author(s)
      坂本浩隆,中西(大野)義典,岡田真人
    • Organizer
      日本物理学会第70回年次大会
    • Place of Presentation
      早稲田大学,東京都,日本
    • Year and Date
      2015-03-24
    • Related Report
      2014 Annual Research Report
  • [Presentation] マルコフ確率場モデルのハイパーパラメータ推定に対するダウンサンプリングの影響2015

    • Author(s)
      坂本浩隆,中西(大野)義典,岡田真人
    • Organizer
      電子情報通信学会ニューロコンピューティング研究会
    • Place of Presentation
      玉川大学,東京都,日本
    • Year and Date
      2015-03-16 – 2015-03-17
    • Related Report
      2014 Annual Research Report
  • [Presentation] A trial for Improvement in reproducibility of spatial distribution of afterslip in geodetic data inversion2014

    • Author(s)
      T. Hori, R. Nakata, T. Kuwatani, M. Okada
    • Organizer
      American Geopysical Union Fall meeting 2014
    • Place of Presentation
      アメリカ・サンフランシスコ
    • Year and Date
      2014-12-15 – 2014-12-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] Data Processing Technology for extracting earch processes2014

    • Author(s)
      T. Kuwatani, K. Nagata, M. Okada, T. Komai, N. Tsuchiya
    • Organizer
      13th International Symposium on Mineral Exploration
    • Place of Presentation
      ベトナム・ハノイ
    • Year and Date
      2014-09-22 – 2014-09-23
    • Related Report
      2014 Annual Research Report
  • [Presentation] スパース性に基づく受容野構造の推定2014

    • Author(s)
      四倉晋平, 大森敏明, 五十嵐康彦, 岡田真人
    • Organizer
      日本物理学会第69回年次大会
    • Place of Presentation
      東海大学,神奈川県,日本
    • Related Report
      2013 Annual Research Report
  • [Presentation] 2次元マルコフ確率場のハイパーパラメータ分布推定2014

    • Author(s)
      中西(大野)義典,永田賢二,庄野逸,岡田真人
    • Organizer
      日本物理学会第69回年次大会
    • Place of Presentation
      東海大学,神奈川県,日本
    • Related Report
      2013 Annual Research Report
  • [Presentation] スパイクトリガー平均のスパース推定2013

    • Author(s)
      四倉晋平, 大森敏明, 永田賢二, 岡田真人
    • Organizer
      第57回システム制御情報学会 研究発表講演会
    • Place of Presentation
      兵庫県民会館,兵庫県,日本
    • Related Report
      2013 Annual Research Report
  • [Presentation] Sparse Estimation of Spike-Triggered Average2013

    • Author(s)
      Shimpei Yotsukura, Toshiaki Omori, Kenji Nagata and Masato Okada
    • Organizer
      情報処理学会 第93回数理モデル化と問題解決(MPS)研究会
    • Place of Presentation
      北海道大学,北海道,日本
    • Related Report
      2013 Annual Research Report
  • [Presentation] スパイクトリガー平均のスパース推定について2013

    • Author(s)
      四倉晋平, 大森敏明, 永田賢二, 岡田真人
    • Organizer
      第27回人工知能学会全国大会
    • Place of Presentation
      富山市民プラザ,富山県,日本
    • Related Report
      2013 Annual Research Report
  • [Presentation] 岩石学へのデータ駆動型アプローチ2013

    • Author(s)
      桑谷立,永田賢二,岡田真人,鳥海光弘
    • Organizer
      日本地質学会
    • Place of Presentation
      東北大学,宮城県,日本
    • Related Report
      2013 Annual Research Report

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Published: 2013-05-21   Modified: 2019-07-29  

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