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Creation of a new light-dependent gene expression system

Research Project

Project/Area Number 25282229
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Biomolecular chemistry
Research InstitutionTokyo Institute of Technology

Principal Investigator

Masuda Shinji  東京工業大学, バイオ研究基盤支援総合センター, 准教授 (30373369)

Co-Investigator(Kenkyū-buntansha) Tanaka Mikiko  東京工業大学, 生命理工学研究科, 准教授 (40376950)
Asano Tsunaki  首都大学, 東京理工学研究科, 助教 (40347266)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥18,590,000 (Direct Cost: ¥14,300,000、Indirect Cost: ¥4,290,000)
Fiscal Year 2015: ¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2014: ¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Fiscal Year 2013: ¥7,410,000 (Direct Cost: ¥5,700,000、Indirect Cost: ¥1,710,000)
Keywords遺伝子発現制御 / 光受容体 / オプトジェネティクス / BLUF / 遺伝子発現 / 光遺伝学 / 転写制御
Outline of Final Research Achievements

In this study, we aimed to construct a novel light-dependent gene expression system. We utilized the light-dependent protein-protein interaction between the blue-light photoreceptor PixD and its interacting protein PixE. We found that PixD interacts with the PixE N-terminal region. The N-terminal region of PixE was fused with the transcription factor AGAMOUS of the model plant Arabidopsis. Previous studies showed that AGAMOUS is necessary for normal flower formation. Thus, blue-light-dependent modulation of AGAMOUS activity could be monitored easily by phenotypic analysis. Biochemical analysis showed that PixD interacts with the chimeric transcription factor, indicating that PixD may control the chimeric transcription factor activity also in vivo. To check this hypothesis, we produce transgenic Arabidopsis expressing constitutively PixD and/or the chimeric transcription factor.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (24 results)

All 2016 2015 2014 2013 Other

All Journal Article (10 results) (of which Peer Reviewed: 10 results,  Open Access: 4 results,  Acknowledgement Compliant: 2 results) Presentation (14 results) (of which Int'l Joint Research: 3 results,  Invited: 5 results)

  • [Journal Article] PICCORO: A technique for manipulating the activity of transcription factors with blue light.2016

    • Author(s)
      Masuda, S., and Tanaka, M.
    • Journal Title

      Methods Cell Biol.

      Volume: 135

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Cross-linking analysis reveals the putative dimer structure of the cyanobacterial BLUF photoreceptor PixD2015

    • Author(s)
      Ren, S., Sugimoto, Y., Kobayashi, T. and Masuda, S.
    • Journal Title

      FEBS Lett.

      Volume: 589 Issue: 15 Pages: 1879-1882

    • DOI

      10.1016/j.febslet.2015.05.019

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Evidence that altered cis element spacing affects PpsR mediated redox control of photosynthesis gene expression in Rubrivivax gelatinosus2015

    • Author(s)
      Shimizu, T., Cheng, Z., Matsuura, K., Masuda, S. and Bauer C. E.
    • Journal Title

      PLos one

      Volume: 10 Issue: 6 Pages: e0128446-e0128446

    • DOI

      10.1371/journal.pone.0128446

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Elucidation of genetic backgrounds necessary for chlorophyll a biosynthesis toward artificial creation of oxygenic photosynthesis.2015

    • Author(s)
      Tsukatani, Y., and Masuda, S.
    • Journal Title

      Orig. Life Evol. Biosph.

      Volume: 45 Issue: 3 Pages: 367-369

    • DOI

      10.1007/s11084-015-9446-1

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Visualizing Molecular Functions and Cross-Species Activity of Sex-Peptide in Drosophila.2015

    • Author(s)
      Manabu Tsuda, Peyre JB, Tsunaki Asano, Toshiro Aigaki
    • Journal Title

      Genetics

      Volume: 200 Issue: 4 Pages: 1161-1169

    • DOI

      10.1534/genetics.115.177550

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Re-examination of a α-chymotrypsin-solubilized laccase in the pupal cuticle of the silkworm, Bombyx mori: insights into the regulation system for laccase activation during the ecdysis process2014

    • Author(s)
      T. Asano, M. Taoka, Y. Yamauchi, R. C. Everroad, Y. Seto, T. Isobe, M. Kamo, N. Chosa
    • Journal Title

      Insect Biochemistry and Molecular Biology

      Volume: 55 Pages: 61-69

    • DOI

      10.1016/j.ibmb.2014.10.004

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Efficient and cost effective production of active-form human PKB using silkworm larvae.2014

    • Author(s)
      R. Maesaki, R. Satoh, M. Taoka, T. Kanaba, T. Asano, C. Fujita, T. Fujiwara, Y. Ito, T. isobe, T. Hakoshima, K. Maenaka, and M. Mishima
    • Journal Title

      Scientific Reports

      Volume: 4 Issue: 1 Pages: 6016-6016

    • DOI

      10.1038/srep06016

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Blue light-mediated manipulation of transcription factor activity in vivo.2013

    • Author(s)
      Shinji Masuda, Yuki Nakatani, Shukun Ren, Mikiko Tanaka
    • Journal Title

      ACS Chemical Biology

      Volume: 8 Issue: 12 Pages: 2649-2653

    • DOI

      10.1021/cb400174d

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] レーザー技術を応用した発生学研究の新展開2013

    • Author(s)
      田中幹子
    • Journal Title

      Proceedings of the 79th Laser Materials Processing Conference

      Volume: 1

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 昆虫外骨格内に存在するメラニン合成酵素2013

    • Author(s)
      朝野維起
    • Journal Title

      比較生理生化学

      Volume: 30

    • NAID

      10031202766

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] Cyanobacterial BLUF protein PixD-dependent light signal transduction mechanism2016

    • Author(s)
      Sugimoto, Y., Masuda, S.
    • Organizer
      第57回日本植物生理学会
    • Place of Presentation
      岩手大学
    • Year and Date
      2016-03-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] Significance of dynamic interaction between the BLUF photoreceptor PixD and its downstream factor PixE for controlling phototaxis in cyanobacteria2015

    • Author(s)
      Masuda, S.
    • Organizer
      The International Chemical Congress of Pacific Basin Societies 2015
    • Place of Presentation
      Honolulu, Hawaii
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Contribution of laccase2 system to differentiation from Crustacea to Insecta2015

    • Author(s)
      Asano, T.
    • Organizer
      SIG (special interest group) arthropod cuticle meeting of Royal Entomological Society
    • Place of Presentation
      ドレスデン
    • Year and Date
      2015-09-08
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Genome Structure of the Marine Purple photosynthetic Bacterium Rhodovulum sulfidophilum2015

    • Author(s)
      Masuda, S.:, Tsukatani, Y., Mori, H., Kurokawa, K.
    • Organizer
      The International Symposium on Photosynthetic Prokaryotes
    • Place of Presentation
      Tubingen, Germany
    • Year and Date
      2015-08-02
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] “PICCORO”-a novel technique for manipulating the activity of transcription factors with blue light2015

    • Author(s)
      Shinji Masuda, Yuki Nakatani, Shukun Ren, Mikiko Tanaka
    • Organizer
      6th Strategic Conference of Zebrafish Investigators
    • Place of Presentation
      Pacific Grove,USA
    • Year and Date
      2015-01-17 – 2015-01-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] BLUF: the highly conserved blue-light photoreceptor controlling a wide variety of physiological activities in microorganisms2014

    • Author(s)
      Shinji Masuda
    • Organizer
      環境微生物系学会合同大会2014
    • Place of Presentation
      アクトシティー浜松(静岡県・浜松市)
    • Year and Date
      2014-10-24
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] BLUFタンパク質の光化学とオプトジェネティクス2014

    • Author(s)
      増田真二
    • Organizer
      第52回日本生物物理学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道・札幌市)
    • Year and Date
      2014-09-26
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] BLUFタンパク質PapBのFTIR法による構造解析2014

    • Author(s)
      Hiroaki Akutsu, Shinji Masuda
    • Organizer
      第52回日本生物物理学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道・札幌市)
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] Blue light-mediated manipulation of transcription factor activity in zebrafish embryos2014

    • Author(s)
      Shinji Masuda, Yuki Nakatani, Shukun Ren, Mikiko Tanaka
    • Organizer
      47th Annual Meeting of the Japanese Society of Developmental Biologists
    • Place of Presentation
      愛知県産業労働センター(愛知・名古屋市)
    • Year and Date
      2014-05-27 – 2014-05-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] 紅色光合成細菌Rubrivivax gelatinosusにおける光合成遺伝子の制御に関わる転写因子 PpsRの性質2013

    • Author(s)
      清水隆之、Zhuo Cheng, 松浦克美、増田真二、Carl Bauer
    • Organizer
      第4回 日本光合成学会年会
    • Place of Presentation
      名古屋大学
    • Related Report
      2013 Annual Research Report
  • [Presentation] レーザー技術を応用した発生学研究の新展開2013

    • Author(s)
      田中幹子
    • Organizer
      第79回レーザー加工学講演会
    • Place of Presentation
      関西大学
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 昆虫外骨格形成に必須な遺伝子laccase2 の機能解析2013

    • Author(s)
      相澤研介, 相垣敏郎, 朝野維起
    • Organizer
      日本動物学会 84回大会
    • Place of Presentation
      岡山大学
    • Related Report
      2013 Annual Research Report
  • [Presentation] 昆虫脱皮時のラッカーゼ活性調節2013

    • Author(s)
      朝野維起
    • Organizer
      日本動物学会 第84回大会
    • Place of Presentation
      岡山大学
    • Related Report
      2013 Annual Research Report
  • [Presentation] レドックス応答性転写因子PpsRの光合成遺伝子発現制御におけるcis配列の重要性

    • Author(s)
      清水隆之、Zhuo Cheng, 松浦克美、増田真二、Carl Bauer
    • Organizer
      第55回 日本植物生理学会年会
    • Place of Presentation
      富山大学
    • Related Report
      2013 Annual Research Report

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Published: 2013-05-21   Modified: 2019-07-29  

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