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Development of analysis theories on life dynamical systems with hierarchy and robustness

Research Project

Project/Area Number 25287105
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Biological physics/Chemical physics/Soft matter physics
Research InstitutionHokkaido University

Principal Investigator

Komatsuzaki Tamiki  北海道大学, 電子科学研究所, 教授 (30270549)

Co-Investigator(Kenkyū-buntansha) LI Chun-Biu  北海道大学, 電子科学研究所, 准教授 (90397795)
TERAMOTO Hiroshi  北海道大学, 電子科学研究所, 助教 (90463728)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥19,110,000 (Direct Cost: ¥14,700,000、Indirect Cost: ¥4,410,000)
Fiscal Year 2015: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2014: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2013: ¥6,890,000 (Direct Cost: ¥5,300,000、Indirect Cost: ¥1,590,000)
Keywords1分子計測 / 化学反応動力学 / カオス理論 / ネットワーク / 反応経路 / エネルギー地形 / 反応ネットワーク / 相空間構造 / 1分子時系列解析 / 反応ダイナミクス / 遷移状態 / 相空間幾何学 / 化学反応理論 / 状態遷移ネットワーク / カオス / データ駆動型モデリング / 時空間階層 / データ駆動型数理モデリング
Outline of Final Research Achievements

By applying chaos theory developed in the field of celestial mechanics into microscopic chemical reactions, we predicted theoretically that a discrete switching between the reaction/non-reaction coordinate emerges as the total energy increases, and provided an experimental means to prove this unknown phenomenon. From experimentally observed, single molecule time series whose signal-to-noise ratio is low, we developed data-driven mathematical science to reconstruct the underlying information such as network structures and energy landscapes with properly elucidating the measurement errors and errors arising from finiteness of the data, and confirmed their versatility experimentally.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (175 results)

All 2016 2015 2014 2013 Other

All Journal Article (20 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 20 results,  Open Access: 8 results,  Acknowledgement Compliant: 9 results) Presentation (142 results) (of which Int'l Joint Research: 21 results,  Invited: 54 results) Book (2 results) Remarks (8 results) Funded Workshop (3 results)

  • [Journal Article] Extracting subcellular fibrillar alignment with error estimation: Application to microtubules2016

    • Author(s)
      Satoru Tsugawa, Nathan Hervieux, Olivier Hamant, Arezki Boudaoud, Richard S. Smith, Chun-Biu Li and Tamiki Komatsuzaki
    • Journal Title

      Biophys. J

      Volume: 印刷中

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] ATP hydrolysis assists Phosphate release and promotes reaction ordering in F1-ATPase2015

    • Author(s)
      Li, C. B., Ueno, H., Watanabe, R., Noji, H., & Komatsuzaki, T.
    • Journal Title

      Nature Communications

      Volume: 6 Issue: 1 Pages: 10223-10223

    • DOI

      10.1038/ncomms10223

    • NAID

      120005702360

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Deciphering Time Scale Hierarchy in Reaction Networks2015

    • Author(s)
      Yutaka Nagahata, Satoshi Maeda, Hiroshi Teramoto, Takashi Horiyama, Tetsuya Taketsugu, Tamiki Komatsuzaki
    • Journal Title

      The Journal of Physical Chemistry B

      Volume: 120 Issue: 8 Pages: 1961-1971

    • DOI

      10.1021/acs.jpcb.5b09941

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Kinetic Analysis for the Multistep Profiles of Organic Reactions: Significance of the Conformational Entropy on the Rate Constants of the Claisen Rearrangement2015

    • Author(s)
      Yosuke Sumiya, Yutaka Nagahata, Tamiki Komatsuzaki, Tetsuya Taketsugu, Satoshi Maeda
    • Journal Title

      The Journal of Physical Chemistry

      Volume: 119 Issue: 48 Pages: 11641-11649

    • DOI

      10.1021/acs.jpca.5b09447

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mechanism and Experimental Observability of Global Switching Between Reactive and Nonreactive Coordinates at High Total Energies2015

    • Author(s)
      H. Teramoto, M. Toda, H. Kono, M.Takahashi, T. Komatsuzaki
    • Journal Title

      Physical Review Letters

      Volume: 115 Issue: 9 Pages: 093003-093003

    • DOI

      10.1103/physrevlett.115.093003

    • NAID

      120005853086

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Breakdown Mechanisms of Normally Hyperbolic Invariant Manifolds2015

    • Author(s)
      H. Teramoto, M. Toda, T. Komatsuzaki
    • Journal Title

      Nonlinearity

      Volume: 28 Issue: 8 Pages: 2677-2698

    • DOI

      10.1088/0951-7715/28/8/2677

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Error-based Extraction of States and Energy Landscapes from Experimental Single-Molecule Time-Series2015

    • Author(s)
      J. Nicholas Taylor, Chun-Biu Li, David R. Cooper, Christy F. Landes, Tamiki Komatsuzaki
    • Journal Title

      Scientific Reports

      Volume: 5 Issue: 1 Pages: 9174-9174

    • DOI

      10.1038/srep09174

    • NAID

      120005600754

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] トップダウンとボトムアップの橋渡し2014

    • Author(s)
      小松崎民樹
    • Journal Title

      生体の科学

      Volume: 65 Pages: 444-445

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Diversity in ATP concentrations in a single bacterial cell population revealed by quantitative single-cell imaging2014

    • Author(s)
      Hideyuki Yaginuma, Shinnosuke Kawai, Kazuhito V. Tabata, Keisuke Tomiyama, Akira Kakizuka, Tamiki Komatsuzaki, Hiroyuki Noji, and Hiromi Imamura
    • Journal Title

      Scientific Reports

      Volume: 4 Issue: 1 Pages: 6522-6522

    • DOI

      10.1038/srep06522

    • NAID

      120005575159

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Handling Noisy Data from Single Molecule Experiments2014

    • Author(s)
      Chun-Biu Li, Tamiki Komatsuzaki
    • Journal Title

      Seibutsu Butsuri

      Volume: 54 Issue: 5 Pages: 257-258

    • DOI

      10.2142/biophys.54.257

    • NAID

      130004794709

    • ISSN
      0582-4052, 1347-4219
    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A new method to improve validity range of Lie canonical perturbation theory: with a central focus on a concept of non‐blow‐up region2014

    • Author(s)
      Hiroshi Teramoto, Mikito Toda, Tamiki Komatsuzaki
    • Journal Title

      Theoretical Chemistry Account

      Volume: 133 Issue: 11

    • DOI

      10.1007/s00214-014-1571-9

    • NAID

      120005650128

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Local-heterogeneous responses and transient dynamics of cage breaking2014

    • Author(s)
      Preetom Nag, Hiroshi Teramoto, Chun-Biu Li, Joseph Z. Terdik, Norbert F. Scherer, Tamiki Komatsuzaki
    • Journal Title

      The Journal of Chemical Physics

      Volume: 141 Issue: 10

    • DOI

      10.1063/1.4894866

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Fast Step Transition and State Identification (STaSI) for Discrete Single-Molecule Data Analysis2014

    • Author(s)
      Bo Shuang, David Cooper, J. Nick Taylor, Lydia Kisley, Jixin Chen, Wenxiao Wang, Chun Biu Li, Tamiki Komatsuzaki, Christy F. Landes
    • Journal Title

      The Journal of Physical Chemistry Letters

      Volume: 5 Issue: 18 Pages: 3157-3161

    • DOI

      10.1021/jz501435p

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Numerical Construction of Estimators for Single-Molecule Fluorescence Measurements2013

    • Author(s)
      Shinnosuke Kawai, David Cooper, Christy F. Landes, Henning D. Mootz, Haw Yang, Tamiki Komatsuzaki
    • Journal Title

      The Journal of Physical Chemistry B

      Volume: 117 Issue: 27 Pages: 8061-8074

    • DOI

      10.1021/jp402328m

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Reactivity boundaries to separate the fate of a chemical reaction associated with an index-two saddle2013

    • Author(s)
      Y. Nagahata, H. Teramoto, C.-B. Li, S. Kawai, and T. Komatsuzaki
    • Journal Title

      Physical Review E

      Volume: 87 Issue: 6

    • DOI

      10.1103/physreve.87.062817

    • NAID

      120005510939

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Aggregated Markov Model Using Time Series of Single Molecule Dwell Times with Minimum Excessive Information2013

    • Author(s)
      Chun-Biu Li, Tamiki Komatsuzaki
    • Journal Title

      Physical Review Letters

      Volume: 111 Issue: 5 Pages: 058301-058301

    • DOI

      10.1103/physrevlett.111.058301

    • NAID

      120005333588

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Detecting invariant manifolds as stationary Lagrangian coherent structures in autonomous dynamical systems2013

    • Author(s)
      Hiroshi Teramoto, George Haller and Tamiki Komatsuzaki
    • Journal Title

      Chaos

      Volume: 23 Issue: 4

    • DOI

      10.1063/1.4824314

    • NAID

      120005385313

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reactivity boundaries for chemical reactions associated with higher index and multiple saddles2013

    • Author(s)
      Yutaka Nagahata, Hiroshi Teramoto, Chun-Biu Li, Shinnosuke Kawai, Tamiki Komatsuzaki
    • Journal Title

      Physical Review E

      Volume: 88 Issue: 4

    • DOI

      10.1103/physreve.88.042923

    • NAID

      120005367435

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Spatio-temporal Hierarchy in the Dynamics of a Minimalist Protein Model2013

    • Author(s)
      Yasuhiro Matsunaga, Akinori Baba, Chun Biu Li, John Straub, Mikito Toda, Tamiki Komatsuzaki, R. Berry
    • Journal Title

      The Journal of Chemical Physics

      Volume: 139 Issue: 21 Pages: 215101-215101

    • DOI

      10.1063/1.4834415

    • NAID

      120005385312

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Non-Markovian Properties and Multiscale Hidden Markovian Network Buried in Single Molecule Time Series2013

    • Author(s)
      Tahmina Sultana, Hiroaki Takagi, Miki Morimatsu, Hiroshi Teramoto, Chun-Biu Li, Yasushi Sako, Tamiki Komatsuzaki
    • Journal Title

      The Journal of Chemical Physics

      Volume: 139 Issue: 24 Pages: 245101-245101

    • DOI

      10.1063/1.4848719

    • NAID

      120005385318

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] Molecular Data Science Perspectives for Individuality Covering from Molecules to Cells2016

    • Author(s)
      小松崎 民樹
    • Organizer
      統合生命医科学研究センター疾患生物学セミナー
    • Place of Presentation
      理化学研究所横浜キャンパス(神奈川県横浜市)
    • Year and Date
      2016-03-18
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Classification of Electron Energy Level Crossings in terms of the Theory of Singularities and Analysis of Non-Adiabatic Transitions around the Crossings2016

    • Author(s)
      Hiroshi Teramoto, Mikito Toda, Tamiki Komatsuzaki
    • Organizer
      Computational Chemistry (CC) Symposium in ICCMSE
    • Place of Presentation
      Athens, Greece
    • Year and Date
      2016-03-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Classification of Hamiltonians in neighborhoods of electron energy level crossings in terms of the theory of singularities2016

    • Author(s)
      寺本央
    • Organizer
      理論分子科学・分子非線形科学のこれまでとこれから
    • Place of Presentation
      東京大学駒場リサーチキャンパス(東京都目黒区)
    • Year and Date
      2016-03-05
    • Related Report
      2015 Annual Research Report
  • [Presentation] Classification of Electron Energy Level Crossings in terms of the Theory of Singularities and Analysis of Non-Adiabatic Transitions around the Crossings2016

    • Author(s)
      寺本央, 戸田幹人, 小松崎民樹
    • Organizer
      偏微分方程式姫路研究会
    • Place of Presentation
      イーグレ姫路(兵庫県姫路市)
    • Year and Date
      2016-03-02
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Toward deciphering cell individuality in systems biology2015

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Symposium #137 Life at Small Copy Numbers (The 2015 International Chemical Congress of Pacific Basin Societies)
    • Place of Presentation
      Hawaii, USA
    • Year and Date
      2015-12-19
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Energy landscapes and conformation network learned from single molecule time series2015

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Symposium #121 Deciphering molecular complexity from protein functions to cellular network (The 2015 International Chemical Congress of Pacific Basin Societies)
    • Place of Presentation
      Hawaii, USA
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 特異点論によるバンド間交差の分類2015

    • Author(s)
      寺本 央, 戸田 幹人, 近藤 憲治, 小松崎 民樹
    • Organizer
      第1回「トポロジーが紡ぐ物質科学のフロンティア」領域研究会
    • Place of Presentation
      京都大学芝蘭会館(京都府京都市)
    • Year and Date
      2015-12-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] Dynamical Reaction Theory: Beyond the conventional perturbation theory2015

    • Author(s)
      Hiroshi Teramoto, Mikito Toda, Tamiki Komatsuzaki
    • Organizer
      Colloquium on kinetics and scattering theory for astrophysics(in a part of the extended workshop “Theory of Gas Phase Scattering and Reactivity for Astrophysics”)
    • Place of Presentation
      Potsdam, Germany
    • Year and Date
      2015-11-16
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Phase Space geometry and Chemical Reaction Dynamics: Past, Present, and Future2015

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Colloquium on kinetics and scattering theory for astrophysics(in a part of the extended workshop “Theory of Gas Phase Scattering and Reactivity for Astrophysics”)
    • Place of Presentation
      Potsdam, Germany
    • Year and Date
      2015-11-16
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Developing high precision algorithm to predict observation timescale hierarchy of an isomerization reaction network2015

    • Author(s)
      Yutaka Nagahata, Satoshi Maeda, Hiroshi Teramoto, Chun-Biu Li, Tetsuya Taketsugu, Tamiki Komatsuzaki
    • Organizer
      The 16th RIES-Hokudai International Symposium
    • Place of Presentation
      Chateraise Gateaux Kingdom Sapporo, Sapporo, Hokkaido
    • Year and Date
      2015-11-10
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Classification and Control of electron energy level crossings in terms of the theory of singularity2015

    • Author(s)
      Hiroshi Teramoto, Mikito Toda, Tamiki Komatsuzaki
    • Organizer
      The 16th RIES-Hokudai International Symposium
    • Place of Presentation
      Chateraise Gateaux Kingdom Sapporo, Sapporo, Hokkaido
    • Year and Date
      2015-11-10
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Kinetics of Multiple conductance levels of Mechanosensitive Ion Channel2015

    • Author(s)
      Genming Wang, Chun-Biu Li, Hitoshi Tatsumi, Tamiki Komatsuzaki
    • Organizer
      The 16th RIES-Hokudai International Symposium
    • Place of Presentation
      Chateraise Gateaux Kingdom Sapporo, Sapporo, Hokkaido
    • Year and Date
      2015-11-10
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] The Onset of Non-equilibrium Effects at High Temperature in the Reaction Kinetics of F1-ATPase2015

    • Author(s)
      Yuji Tamiya, Chun-Biu Li, Rikiya Watanabe, Hiroyuki Noji, Tamiki Komatsuzaki
    • Organizer
      The 16th RIES-Hokudai International Symposium
    • Place of Presentation
      Chateraise Gateaux Kingdom Sapporo, Sapporo, Hokkaido
    • Year and Date
      2015-11-10
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] マルコフ連鎖の時間階層的クラスタリング2015

    • Author(s)
      永幡 裕, 前田 理, 寺本 央, Chun-Biu Li, 武次 徹也, 小松崎 民樹
    • Organizer
      ERATO湊離散構造処理系プロジェクト 「2015年度 秋のワークショップ」
    • Place of Presentation
      丸駒温泉(北海道千歳市)
    • Year and Date
      2015-11-08
    • Related Report
      2015 Annual Research Report
  • [Presentation] 特異点論を用いた非断熱交差の安定性と分岐の解析2015

    • Author(s)
      寺本央
    • Organizer
      統計数理研究所 数学協働プログラム ワークショップ (社会創造数学研究センターとの共同開催)、大自由度分子系における化学反応機序の理解と制御
    • Place of Presentation
      北海道大学理学部3号館(北海道札幌市)
    • Year and Date
      2015-10-31
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Single Molecule Biophysics: How can One Dig the Underlying Network from Noisy and Short Time Series?2015

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      International Conference on “Challenges in Data Science: a Complex Systems Perspective
    • Place of Presentation
      Torino, Italy
    • Year and Date
      2015-10-14
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Identifying Different Reaction Processes in terms of Graph Laplacian2015

    • Author(s)
      Hiroshi Teramoto, Alireza Hadjighasem, Daniel Karrasch, George Haller, Tamiki Komatsuzaki
    • Organizer
      ランダム力学系理論とその応用
    • Place of Presentation
      京都大学数理解析研究所(京都府京都市)
    • Year and Date
      2015-09-30
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 1分子時系列データから解読するエネルギー地形とネットワーク2015

    • Author(s)
      小松崎 民樹
    • Organizer
      データ駆動科学の新展開」ミニ研究会
    • Place of Presentation
      北海道大学 百年記念会館(北海道札幌市)
    • Year and Date
      2015-09-24
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 非平衡効果が引き起こすF1分子モーターの非アレニウス型温度依存性2015

    • Author(s)
      田宮 裕治, Chun-Biu Li, 渡邉 力也, 野地 博行, 小松崎 民樹
    • Organizer
      第9回分子科学討論会
    • Place of Presentation
      東京工業大学大岡山キャンパス(東京都目黒区)
    • Year and Date
      2015-09-16
    • Related Report
      2015 Annual Research Report
  • [Presentation] 複雑分子系の異性化反応ネットワークに埋め込まれた時間階層構造の解読2015

    • Author(s)
      永幡 裕, 前田 理, 寺本 央, Chun-Biu Li, 堀山 貴史, 武次 徹也, 小松崎 民樹
    • Organizer
      第9回分子科学討論会
    • Place of Presentation
      東京工業大学 大岡山キャンパス(東京都目黒区)
    • Year and Date
      2015-09-16
    • Related Report
      2015 Annual Research Report
  • [Presentation] 特異点論を用いた非断熱交差の安定性と分岐の解析2015

    • Author(s)
      寺本 央, 戸田 幹人, 小松崎 民樹
    • Organizer
      第70回日本物理学会
    • Place of Presentation
      関西大学千里山キャンパス(大阪府吹田市)
    • Year and Date
      2015-09-16
    • Related Report
      2015 Annual Research Report
  • [Presentation] 複合化学反応系の分子シミュレーション-第一原理シミュレーションから分子技術へ-2015

    • Author(s)
      永幡 裕, 前田 理, 寺本 央, Chun-Biu Li, 武次 徹也, 小松崎 民樹
    • Organizer
      化学反応経路探索のニューフロンティア
    • Place of Presentation
      大井町駅前品川区立総合区民会館きゅりあん(東京都大井町)
    • Year and Date
      2015-09-15
    • Related Report
      2015 Annual Research Report
  • [Presentation] 複雑反応ネットワークに埋め込まれた時間階層構造の解読2015

    • Author(s)
      Yutaka Nagahata, Satoshi Maeda, Hiroshi Teramoto, Chun-Biu Li, Takashi Horiyama, Tetsuya Taketsugu, Tamiki Komatsuzaki
    • Organizer
      第53回日本生物物理学会
    • Place of Presentation
      金沢大学角間キャンパス自然科学本館(石川県金沢市)
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] 植物の中の局所微小管と細胞成長の関係について2015

    • Author(s)
      Satoru Tsugawa, Chun-Biu Li, Tamiki Komatsuzaki
    • Organizer
      第53回日本生物物理学会
    • Place of Presentation
      金沢大学角間キャンパス自然科学本館(石川県金沢市)
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] 非平衡効果が引き起こすF1分子モーターの非アレニウス型温度依存性2015

    • Author(s)
      Yuji Tamiya, Chun-Biu Li, Rikiya Watanabe, Hiroyuki Noji, Tamiki Komatsuzaki
    • Organizer
      第53回日本生物物理学会
    • Place of Presentation
      金沢大学角間キャンパス自然科学本館(石川県金沢市)
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] Single Molecule Time Series Analysis of F1-ATPase to Unravel the Role of Bound-ATP Hydrolysis2015

    • Author(s)
      Chun-Biu Li, Tamiki Komatsuzaki
    • Organizer
      第53回日本生物物理学会
    • Place of Presentation
      金沢大学角間キャンパス自然科学本館(石川県金沢市)
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] Classification and control of electron energy level crossings2015

    • Author(s)
      Hiroshi Teramoto, Mikito Toda, Tamiki Komatsuzaki
    • Organizer
      北大理論化学ワークショッ プ
    • Place of Presentation
      北海道大学理学部7号館(北海道札幌市)
    • Year and Date
      2015-09-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] The Key and Unlock Mechanisms in F1-ATPase Unveiled by Single Molecule Time Series Analysis2015

    • Author(s)
      Chun-Biu Li
    • Organizer
      The 4th Workshop on Molecular & Chemical Kinetics
    • Place of Presentation
      Berlin, Germany
    • Year and Date
      2015-09-07
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Transition States from Gas Phase, Condensed Phase to Complex Networks2015

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Telluride summer workshop “Geometry of Chemical Reaction Dynamics”
    • Place of Presentation
      Telluride, CO., USA
    • Year and Date
      2015-07-27
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] A Global Dynamical Switching of a Reaction Coordinate and its Experimental Observability2015

    • Author(s)
      Hiroshi Teramoto, Mikito Toda, Masahiko Takahashi, Hirohiko Kohno, Tamiki Komatsuzaki
    • Organizer
      Telluride summer workshop “Geometry of Chemical Reaction Dynamics”
    • Place of Presentation
      Telluride, CO., USA
    • Year and Date
      2015-07-27
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 複雑な異性化反応ネットワークに埋め込まれた時間階層構造の解読法の開発2015

    • Author(s)
      永幡 裕, 前田 理, 寺本 央, Chun-Biu Li, 堀山 貴史, 武次 徹也, 小松崎 民樹
    • Organizer
      日本化学会北海道支部 2015年 夏季研究発表会
    • Place of Presentation
      北海道教育大学函館校(北海道函館市)
    • Year and Date
      2015-07-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] Sumi-Marcus 型ポテンシャルモデルを用いた F1分子モーターの反応速度定数の解析2015

    • Author(s)
      田宮 裕治, Chun-Biu Li, 渡邉 力也, 野地 博行, 小松崎 民樹
    • Organizer
      日本化学会北海道支部 2015年 夏季研究発表会
    • Place of Presentation
      北海道教育大学函館校(北海道函館市)
    • Year and Date
      2015-07-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] 一細胞計測で見えてきたバクテリア細胞内ATP濃度の多様性2015

    • Author(s)
      柳沼 秀幸, 河合 信之輔, 田端 和仁, 冨山 佳祐, 垣塚 彰, 小松崎 民樹, 岡田 康志, 野地 博行, 今村 博臣
    • Organizer
      第67回日本細胞生物学会大会
    • Place of Presentation
      タワーホール船堀(東京都江東区)
    • Year and Date
      2015-06-30
    • Related Report
      2015 Annual Research Report
  • [Presentation] グラフラプラシアンによる異なる反応プロセスの同定2015

    • Author(s)
      寺本 央, Alireza Hadjighasem, Daniel Karrasch, George Haller, 小松崎 民樹
    • Organizer
      RIMS 研究集会『力学系とその諸分野への応用』
    • Place of Presentation
      京都大学数理解析研究所(京都府京都市)
    • Year and Date
      2015-06-29
    • Related Report
      2015 Annual Research Report
  • [Presentation] How can we define a transition state over a network?2015

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      R. Stephen Berry Tribune Symposium
    • Place of Presentation
      Telluride, CO., USA
    • Year and Date
      2015-06-23
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] A kinetic disconnectivity graph to decode timescale hierarchy buried in reaction networks2015

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Chemistry & Dynamics in Complex Environments
    • Place of Presentation
      Telluride, CO., USA
    • Year and Date
      2015-06-23
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Energy Landscapes learned from Single-Molecule Time-Series: Dimensionality and Disconnectivity Graph2015

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      The Complexity of Dynamics Kinetics from Single Molecules to Cells
    • Place of Presentation
      Telluride, CO., USA
    • Year and Date
      2015-06-14
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] The Roles of ATP Hydrolysis Revealed by Single Molecule Time Series Analysis of Rotary Fluctuations in F1-ATPase2015

    • Author(s)
      Chun-Biu Li
    • Organizer
      The Complexity of Dynamics Kinetics from Single Molecules to Cells
    • Place of Presentation
      Telluride, CO., USA
    • Year and Date
      2015-06-14
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] マルコフ連鎖の時間階層的クラスタリング2015

    • Author(s)
      永幡 裕, 前田 理, 寺本 央, Chun-Biu Li, 武次 徹也, 小松崎 民樹
    • Organizer
      ERATO湊離散構造処理系プロジェクト 「2015年度 初夏のワークショップ」
    • Place of Presentation
      北海道大学情報科学研究科 ERATO 会議室(北海道札幌市)
    • Year and Date
      2015-06-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] A Global Dynamical Switching of a Reaction Coordinate and its Experimental Observability2015

    • Author(s)
      Hiroshi Teramoto, Mikito Toda, Masahiko Takahashi, Hirohiko Kono, Tamiki Komatsuzaki
    • Organizer
      31st Symposium on Chemical Kinetics and Dynamics
    • Place of Presentation
      Frontier Research in Applied Sciences Building, Hokkaido University, Sapporo Hokkaido
    • Year and Date
      2015-06-03
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Deciphering timescale hierarchy encoded in complex reaction networks2015

    • Author(s)
      Yutaka Nagahata, Satoshi Maeda, Hiroshi Teramoto, Chun-Biu Li, Takashi Horiyama, Tetsuya Taketsugu, Tamiki Komatsuzaki
    • Organizer
      31st Symposium on Chemical Kinetics and Dynamics
    • Place of Presentation
      Frontier Research in Applied Sciences Building, Hokkaido University, Sapporo Hokkaido
    • Year and Date
      2015-06-03
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Dynamical Switching of Reactive and Nonreactive Modes at High Energies2015

    • Author(s)
      Tamiki Komatsuzaki, Mikito Toda, Hiroshi Teramoto
    • Organizer
      2015 SIAM Conference on Dynamical Systems
    • Place of Presentation
      Snowbird, Utah, USA
    • Year and Date
      2015-05-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Identifying different reaction processes in terms of graph laplacian2015

    • Author(s)
      Hiroshi Teramoto, Tamiki Komatsuzaki
    • Organizer
      IlLuminyating 2015
    • Place of Presentation
      Madrid, Spain
    • Year and Date
      2015-05-07
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Energy landscapes derived from single molecule spectroscopy and complex networks2015

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Architecture, dynamics, and functionality of molecular biosystems
    • Place of Presentation
      The Institute for Molecular Science(愛知県岡崎市)
    • Year and Date
      2015-03-31
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Understandings of Chemical Reaction Dynamics in terms of Dynamical System Theory2015

    • Author(s)
      Hiroshi Teramoto, Mikito Toda and Tamiki Komatsuzaki
    • Organizer
      Computational Chemistry (CC) Symposium in ICCMSE
    • Place of Presentation
      Athens, Greece
    • Year and Date
      2015-03-20
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Fast Step Transition and State Identification (STaSI) for Discrete Single-Molecule Data Analysis2015

    • Author(s)
      B. Shuang, D. Cooper, J. N. Taylor, L. Kisley, J. Chen, W. Wang, C.-B. Li, T. Komatsuzaki, and C. F. Landes
    • Organizer
      2015 Oil & Gas High Performance Computing Workshop
    • Place of Presentation
      Houston, USA
    • Year and Date
      2015-03-05
    • Related Report
      2014 Annual Research Report
  • [Presentation] Hierarchical structure of no-return transition states2015

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Spectroscopy and Dynamics of Molecules and Clusters 2015
    • Place of Presentation
      Nainital, India
    • Year and Date
      2015-02-21
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Fast Step Transition and State Identification (STaSI) for Discrete Single-Molecule Data Analysis2015

    • Author(s)
      Bo Shuang, David Cooper, J. Nick Taylor, Lydia Kisley, Jixin Chen, Wenxiao Wang, Chun Biu Li, Tamiki Komatsuzaki, Chrisy Landes
    • Organizer
      The 2015 Quantitative BioImaging Conference
    • Place of Presentation
      Paris, France
    • Year and Date
      2015-01-07
    • Related Report
      2014 Annual Research Report
  • [Presentation] Error-based Extraction of Effective Free Energy Landscapes from Experimental Single-Molecule Time-Series2015

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      The 8th biennial workshop on Single Molecule Biophysics (SMB)
    • Place of Presentation
      Aspen, USA
    • Year and Date
      2015-01-04
    • Related Report
      2014 Annual Research Report
  • [Presentation] An extraction method of local microtubule alignments in Arabidopsis sepal2014

    • Author(s)
      Satoru Tsugawa, Chun-Biu Li, Tamiki Komatsuzaki
    • Organizer
      The 15th Ries-Hokudai International Symposium 響[hibiki]
    • Place of Presentation
      CHATERAISE Gateaux Kingdom SAPPORO(北海道札幌市)
    • Year and Date
      2014-12-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] Error-based Extraction of Effective Free Energy Landscapes from Experimental Single-Molecule Time-Series2014

    • Author(s)
      J.N. Taylor, Chun Biu Li, David R. Cooper, Christy F. Landes, and Tamiki Komatsuzaki
    • Organizer
      The 15th Ries-Hokudai International Symposium 響[hibiki]
    • Place of Presentation
      CHATERAISE Gateaux Kingdom SAPPORO(北海道札幌市)
    • Year and Date
      2014-12-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] Temperature Dependence of Molecular Motor2014

    • Author(s)
      Yuji Tamiya, Chun-Biu Li, Rikiya Watanabe, Hiroyuki Noji, Tamiki Komatsuzaki
    • Organizer
      The 15th Ries-Hokudai International Symposium 響[hibiki]
    • Place of Presentation
      CHATERAISE Gateaux Kingdom SAPPORO(北海道札幌市)
    • Year and Date
      2014-12-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] An extraction of embedded timescale hierarchies buried in complex reaction network2014

    • Author(s)
      Yutaka Nagahata, Satoshi Maeda, Hiroshi Teramoto, Chun-Biu Li, Takashi Horiyama, Tetsuya Taketsugu, Tamiki Komatsuzaki
    • Organizer
      The 15th Ries-Hokudai International Symposium 響[hibiki]
    • Place of Presentation
      CHATERAISE Gateaux Kingdom SAPPORO(北海道札幌市)
    • Year and Date
      2014-12-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] Local-heterogeneous responses and transient dynamics in colloidal fluids2014

    • Author(s)
      Preetom Nag, Hiroshi Teramoto, Chun Biu Li, Joseph Z. Terdik, Norbert F. Scherer, and Tamiki Komatsuzaki
    • Organizer
      The 15th Ries-Hokudai International Symposium 響[hibiki]
    • Place of Presentation
      CHATERAISE Gateaux Kingdom SAPPORO(北海道札幌市)
    • Year and Date
      2014-12-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] A kinetic disconnectivity graph to decode timescale hierarchy buried in reaction networks2014

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      XIXth International Workshop on Quantum Systems in Chemistry, Physics and Biology
    • Place of Presentation
      New Taipei City, Taiwan
    • Year and Date
      2014-11-16
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Toward extraction of global coordination despite local variability in plant development2014

    • Author(s)
      Satoru Tsugawa, Chun-Biu Li, Tamiki Komatsuzaki
    • Organizer
      New Challenges in Complex Systems Science
    • Place of Presentation
      Nishiwaseda Campus, Waseda University(東京都新宿区)
    • Year and Date
      2014-10-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] Data Driven Approach to Dynamics of Protein Motor2014

    • Author(s)
      Yuji Tamiya, Chun-Biu Li, Rikiya Watanabe, Hiroyuki Noji, Tamiki Komatsuzaki
    • Organizer
      New Challenges in Complex Systems Science
    • Place of Presentation
      Nishiwaseda Campus, Waseda University(東京都新宿区)
    • Year and Date
      2014-10-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] Challenges in Understanding Complex Systems at the Single Molecule Level2014

    • Author(s)
      Chun-Biu Li and Tamiki Komatsuzaki
    • Organizer
      New Challenges in Complex Systems Science
    • Place of Presentation
      Nishiwaseda Campus, Waseda University(東京都新宿区)
    • Year and Date
      2014-10-25
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Chemical Reaction Dynamics and Chaos2014

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      New Challenges in Complex Systems Science
    • Place of Presentation
      Nishiwaseda Campus, Waseda University(東京都新宿区)
    • Year and Date
      2014-10-24
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 複雑分子系の構造異性化反応ネットワークに埋め込まれた時間階層構造の抽出2014

    • Author(s)
      永幡 裕
    • Organizer
      研究会「理論と実験」2014
    • Place of Presentation
      広島大学理学部(広島県東広島市)
    • Year and Date
      2014-10-10
    • Related Report
      2014 Annual Research Report
  • [Presentation] 熱揺らぎに埋もれた力学的な反応経路2014

    • Author(s)
      小松崎 民樹
    • Organizer
      研究会「理論と実験」2014
    • Place of Presentation
      広島大学理学部(広島県東広島市)
    • Year and Date
      2014-10-09
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] A Dynamical Switching of Reactive Mode ⇔ Nonreactive Mode at High Energies for a Hydrogen Atom in Crossed Electric and Magnetic Fields2014

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      11th Asian International Seminar on Atomic and Molecular Physics
    • Place of Presentation
      Katahira Campus, Tohoku University(宮城県仙台市)
    • Year and Date
      2014-10-08
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 分子個性と少数性2014

    • Author(s)
      小松崎 民樹
    • Organizer
      第52回日本生物物理学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道札幌市)
    • Year and Date
      2014-09-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] Dynamical heterogeneity and dynamics of cage breaking and formation in colloidal fluids2014

    • Author(s)
      Nag Preetom, Teramoto Hiroshi, Li Chun-Biu, Komatsuzaki Tamiki
    • Organizer
      第52回日本生物物理学会年会
    • Place of Presentation
      札幌コンベンションセンター(北海道札幌市)
    • Year and Date
      2014-09-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] 複雑分子系の異性化反応ネットワークに埋め込まれた時間階層構造の抽出2014

    • Author(s)
      永幡 裕、前田 理、寺本 央、Chun-Biu Li、堀山 貴史、武次 徹也、小松崎 民樹
    • Organizer
      第8回分子科学討論会
    • Place of Presentation
      広島大学東広島キャンパス(広島県東広島市)
    • Year and Date
      2014-09-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] Extracting coherent molecular vibrational modes by nonlinear time series analysis2014

    • Author(s)
      Hiroshi Teramoto, Mikito Toda and Tamiki Komatsuzaki
    • Organizer
      Workshop on Theory and Applications of Random/Non-autonomous Dynamical Systems
    • Place of Presentation
      London, UK
    • Year and Date
      2014-09-11
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 少数性の生物学において顕在化する分子個性2014

    • Author(s)
      小松崎 民樹
    • Organizer
      日本物理学会2014年秋季大会
    • Place of Presentation
      中部大学春日井キャンパス(愛知県春日井市)
    • Year and Date
      2014-09-09
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 正準変換摂動理論の有効領域の拡張法とそれによる振動子間の非線系共鳴によるエネルギー移動の解明2014

    • Author(s)
      寺本央、戸田幹人、小松崎民樹
    • Organizer
      日本物理学会2014年秋季大会
    • Place of Presentation
      中部大学春日井キャンパス(愛知県春日井市)
    • Year and Date
      2014-09-09
    • Related Report
      2014 Annual Research Report
  • [Presentation] Energy landscapes learned from time series and networks2014

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Energy Landscapes : From Single Molecules to Soft Matter
    • Place of Presentation
      Durham, UK
    • Year and Date
      2014-08-20
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 複雑分子系における構造異性化反応ネットワークの理解に向けて2014

    • Author(s)
      永幡 裕
    • Organizer
      第54回 分子科学若手の会 夏の学校
    • Place of Presentation
      いこいの村能登半島(石川県羽咋郡志賀町)
    • Year and Date
      2014-08-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] 数学の力で読み解く一分子時系列~F1分子モーターを題材として~2014

    • Author(s)
      田宮 裕治、Chun-Biu Li、渡邉力也、野地博行、小松崎民樹
    • Organizer
      第54回 生物物理若手の会 夏の学校
    • Place of Presentation
      ホテルたつき(愛知県蒲郡市)
    • Year and Date
      2014-08-09
    • Related Report
      2014 Annual Research Report
  • [Presentation] Reaction Coordinate Switching Mechanism, on the Possibility of Its Experimental Verification and Its Quantum Manifestation2014

    • Author(s)
      Hiroshi Teramoto, Mikito Toda and Tamiki Komatsuzaki
    • Organizer
      The 10th AIMS Conference on Dynamical Systems, Differential Equations and Applications
    • Place of Presentation
      Madrid, Spain
    • Year and Date
      2014-07-08
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Chance and Necessity in Reactions Under Chaos and Stochastic Fluctuation2014

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      The 10th AIMS Conference on Dynamical Systems, Differential Equations and Applications
    • Place of Presentation
      Madrid, Spain
    • Year and Date
      2014-07-07
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Error-based Extraction of Effective Free Energy Landscapes from Experimental Single-Molecule Time-Series2014

    • Author(s)
      J. Nick Taylor, Chun-Biu Li, and Tamiki Komatsuzaki
    • Organizer
      Macromolecular dynamics: structure, function and diseases
    • Place of Presentation
      Beijing, China
    • Year and Date
      2014-07-03
    • Related Report
      2014 Annual Research Report
  • [Presentation] Extracting Cooperative modes between a biological molecule and water molecules2014

    • Author(s)
      Hiroshi Teramoto, Mikito Toda, Tamiki Komatsuzaki
    • Organizer
      International Workshop "Over the Barriers of Transition Paths: Dynamical Processes in Proteins and Complex Molecular Systems"
    • Place of Presentation
      Tokyo Institute of Technology(神奈川県横浜市)
    • Year and Date
      2014-06-28
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Energy Landscapes Constructed From Single-molecule Time Series And Reaction Networks2014

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Macromolecular dynamics: structure, function and diseases
    • Place of Presentation
      Beijing, China
    • Year and Date
      2014-06-27
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Theories Should Meet Experiments: What Can We Extract From Time Series Data?2014

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Beijing Computational Science Research Center (CSRC) Seminar
    • Place of Presentation
      Beijing, China
    • Year and Date
      2014-06-23
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Error-based Extraction of Effective Free Energy Landscapes from Experimental Single-Molecule Time-Series2014

    • Author(s)
      J. Nick Taylor, Chun-Biu Li, and Tamiki Komatsuzaki
    • Organizer
      ICBP 8th IUPAP international conference on biological physics
    • Place of Presentation
      Beijing, China
    • Year and Date
      2014-06-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] リー正準変換摂動理論のnon blow-up 領域と有効領域の解析2014

    • Author(s)
      寺本央、戸田幹人、小松崎民樹
    • Organizer
      RIMS 研究集会 力学系:理論と応用の相互作用
    • Place of Presentation
      京都大学数理解析研究所(京都府京都市)
    • Year and Date
      2014-06-11
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 複雑分子系における構造異性化反応ネットワークの理解に向けて2014

    • Author(s)
      永幡 裕、前田 理、寺本 央、Chun-Biu Li、堀山 貴史、武次 徹也、小松崎 民樹
    • Organizer
      第17回理論化学討論会
    • Place of Presentation
      名古屋大学(東山キャンパス)ES総合館(愛知県名古屋市)
    • Year and Date
      2014-05-23
    • Related Report
      2014 Annual Research Report
  • [Presentation] 生体分子と水の過渡的な集団運動の抽出2014

    • Author(s)
      寺本央、戸田幹人、小松崎民樹
    • Organizer
      第17回理論化学討論会
    • Place of Presentation
      名古屋大学(東山キャンパス)ES総合館(愛知県名古屋市)
    • Year and Date
      2014-05-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] Energy Landscapes Constructed From Single-Molecule Time Series and Reaction Networks2014

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      The 2014 Les Houches - TSRC Protein Dynamics Workshop
    • Place of Presentation
      Les Houches, France
    • Year and Date
      2014-05-21
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] ノイジーなFRETデータから多重経路を考慮に入れた自由エネルギー地形を抽出する2014

    • Author(s)
      小松崎 民樹
    • Organizer
      理研シンポジウム:細胞システムの動態と論理Ⅵ
    • Place of Presentation
      理化学研究所和光本所(埼玉県和光市)
    • Year and Date
      2014-04-04
    • Related Report
      2014 Annual Research Report
  • [Presentation] タンパク質の時系列から得られたMarkov連鎖の解析に向けて:グラフの分割とクラスタリングで定義する複雑な化学反応における状態とその時間階層構造2014

    • Author(s)
      永幡 裕, 寺本 央, Chun-Biu Li, 小松崎 民樹
    • Organizer
      理研シンポジウム:細胞システムの動態と論理Ⅵ
    • Place of Presentation
      理化学研究所和光本所(埼玉県和光市)
    • Year and Date
      2014-04-04
    • Related Report
      2014 Annual Research Report
  • [Presentation] 軌道レベルのスペクトルによる軌道の複雑さの特徴付け2014

    • Author(s)
      寺本央
    • Organizer
      2013年度冬の力学系研究集会
    • Place of Presentation
      広島大学東千田キャンパス302講義室(広島市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Transportation barriers in dynamical systems2014

    • Author(s)
      Hiroshi Teramoto
    • Organizer
      Workshop on Lagrangian Coherent Structures and Dynamical Systems
    • Place of Presentation
      北海道大学理学部3号館(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Extracting cage breaking motion and dynamical heterogeneity in colloidal fluids in terms of Lagrangian Coherent Structures (LCSs)2014

    • Author(s)
      Preetom Nag
    • Organizer
      Workshop on Lagrangian Coherent Structures and Dynamical Systems
    • Place of Presentation
      北海道大学理学部3号館(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] タンパク質の時系列から得られたMarkov連鎖の解析に向けて:グラフの分割とクラスタリングで定義する複雑な化学反応における状態とその時間階層構造2014

    • Author(s)
      永幡 裕, 堀山 貴史, 前田 理, 寺本 央, Chun-Biu Li, 小松崎 民樹
    • Organizer
      2013 年度日本生物物理学会北海道支部例会
    • Place of Presentation
      北海道大学 シオノギ創薬イノベーションセンター(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] パターン形成における本質的な高次相関情報量の抽出2014

    • Author(s)
      宮川尚紀,寺本央,河合信之輔,李振風,小松崎民樹
    • Organizer
      日本物理学会 第69回年次大会
    • Place of Presentation
      東海大学湘南キャンパス(平塚市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] タンパク質一分子計測から得られたマルコフ連鎖がもつ時間階層構造の理解に向けて2014

    • Author(s)
      永幡裕,寺本央,Chun-Biu Li,小松崎民樹
    • Organizer
      日本物理学会 第69回年次大会
    • Place of Presentation
      東海大学湘南キャンパス(平塚市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 生体分子と水の過渡的な協同運動の抽出2014

    • Author(s)
      寺本央、戸田幹人、小松崎民樹
    • Organizer
      日本物理学会 第69回年次大会
    • Place of Presentation
      東海大学湘南キャンパス(平塚市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Detecting and analyzing methods of normally hyperbolic invariant manifolds2013

    • Author(s)
      Hiroshi Teramoto
    • Organizer
      Illuminating 2013: Dynamical Perspectives on Molecular Processes
    • Place of Presentation
      Loughborough University(Loughborough, UK)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] A microscopic ruler tells us the underlying networks in single molecule measurements2013

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Nanoscale Science Seminars 2013:A Microscopic ruler tells us the underlying networks in single molecule measurements
    • Place of Presentation
      Max Planck Institute(Stuttgart, Germany)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] データ駆動型モデリングと一分子動態解析における虚実2013

    • Author(s)
      小松崎 民樹
    • Organizer
      日本顕微鏡学会第69回学術講演会
    • Place of Presentation
      ホテル阪急エキスポパーク(吹田市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Unbiased estimation of physical properties in noisy experimental data2013

    • Author(s)
      Shinnosuke Kawai, David Cooper, Christy Landes, Henning D. Mootz, Haw Yang, Tamiki Komatsuzaki
    • Organizer
      IMS Workshop on "Hierarchical Molecular Dynamics: From Ultrafast Spectroscopy to Single Molecule Measurements"
    • Place of Presentation
      NINS Okazaki Conference Center(Okazaki, Japan)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Data-driven Approach to Unveil Single Molecule Kinetics from Dwell-Time Time Series2013

    • Author(s)
      Chun-Biu Li
    • Organizer
      IMS Workshop on "Hierarchical Molecular Dynamics: From Ultrafast Spectroscopy to Single Molecule Measurements"
    • Place of Presentation
      NINS Okazaki Conference Center(Okazaki, Japan)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Detecting and analyzing methods of normally hyperbolic invariant manifolds2013

    • Author(s)
      Hiroshi Teramoto
    • Organizer
      XXXIII Dynamics Days Europe-Madrid 2013
    • Place of Presentation
      Madrid, Spain
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Breakdown of Normally Hyperbolic Invariant Manifolds, its Consequences and Quantum Manifestation2013

    • Author(s)
      Hiroshi Teramoto
    • Organizer
      Geometry of Chemical Reaction Dynamics in Gas and Condensed Phases
    • Place of Presentation
      Telluride, CO.(USA)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Reactivity Boundaries to Separate the Fate of a Chemical Reaction Associated with Multiple Saddles2013

    • Author(s)
      Yutaka Nagahata, Hiroshi Teramoto, Chun-Biu Li, Shinnosuke Kawai, Tamiki Komatsuzaki
    • Organizer
      Geometry of Chemical Reaction Dynamics in Gas and Condensed Phases
    • Place of Presentation
      Telluride, CO.(USA)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Phase Space Geometrical Aspects in Condensed Phase Reactions2013

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Geometry of Chemical Reaction Dynamics in Gas and Condensed Phases
    • Place of Presentation
      Telluride, CO.(USA)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Revisiting Energy Landscape & Extracting it from FRET measurement2013

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      The Complexity of Dynamics and Kinetics in Many Dimensions
    • Place of Presentation
      Telluride, CO.(USA)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Does Dynamic Disorder Exist in the Enzymatic Reactions on the Single Molecule Level?2013

    • Author(s)
      Chun-Biu Li
    • Organizer
      The Complexity of Dynamics and Kinetics in Many Dimensions
    • Place of Presentation
      Telluride, CO.(USA)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Identifying states in Markov chain steady state network extracted from time series by finding minimum transition probability2013

    • Author(s)
      Yutaka Nagahata, Hiroshi Teramoto, Chun-Biu Li, Tamiki Komatsuzaki
    • Organizer
      The Complexity of Dynamics and Kinetics in Many Dimensions
    • Place of Presentation
      Telluride, CO.(USA)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Coherent Dynamics in Colloidal Fluids in terms of Lagrangian Coherent Structure2013

    • Author(s)
      Hiroshi Teramoto
    • Organizer
      The Complexity of Dynamics and Kinetics in Many Dimensions
    • Place of Presentation
      Telluride, CO.(USA)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Revisiting Energy Landscape, Timescale, Coarse-Graining2013

    • Author(s)
      Tamiki Komatsuzaki
    • Organizer
      Chemistry and Dynamics in Complex Environments
    • Place of Presentation
      Telluride, CO.(USA)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 2つの反応方向を持つサドルにおける化学反応:行先・起源を分ける反応性境界の抽出2013

    • Author(s)
      永幡 裕, 寺本 央, Chun-Biu Li, 河合 信之輔, 小松崎 民樹
    • Organizer
      日本化学会北海道支部2013年夏季研究発表会
    • Place of Presentation
      北見工業大学(北見市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 実験データからノイズを取り除き背後の物理量を評価する方法2013

    • Author(s)
      河合信之輔・David Cooper・Christy Landes・Henning D. Mootz・Haw Yang・小松崎 民樹
    • Organizer
      日本化学会北海道支部2013年夏季研究発表会
    • Place of Presentation
      北見工業大学(北見市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Toward System Molecular Biology & Data Science2013

    • Author(s)
      小松崎 民樹
    • Organizer
      A Symposium on Single Molecule Biophysics and Cyt c Biochemistry
    • Place of Presentation
      定山渓ビューホテル(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Spectral Analysis of Dynamics from a given Time Series2013

    • Author(s)
      寺本 央、Gerge Haller、戸田 幹人、小松崎 民樹
    • Organizer
      A Symposium on Single Molecule Biophysics and Cyt c Biochemistry
    • Place of Presentation
      定山渓ビューホテル(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Co-operative motion in colloidal fluids in terms of Lagrangian Coherent Structures(LCS)2013

    • Author(s)
      Nag Preetom,寺本 央, Li Chun-Biu, 小松崎 民樹
    • Organizer
      A Symposium on Single Molecule Biophysics and Cyt c Biochemistry
    • Place of Presentation
      定山渓ビューホテル(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Information of multi-order correlation in pattern formation2013

    • Author(s)
      宮川 尚紀,寺本 央, Li Chun-Biu, 小松崎 民樹
    • Organizer
      A Symposium on Single Molecule Biophysics and Cyt c Biochemistry
    • Place of Presentation
      定山渓ビューホテル(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Identifying the most distinct disjoint sets to extract hierarchical structure in Markov chain steady state network extracted from time series by finding “minimum” transition probability2013

    • Author(s)
      永幡 裕, 寺本 央, 堀山 貴史, Chun-Biu Li, 小松崎 民樹
    • Organizer
      A Symposium on Single Molecule Biophysics and Cyt c Biochemistry
    • Place of Presentation
      定山渓ビューホテル(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] When Computational Mechanics Meets Single Molecule Time Series2013

    • Author(s)
      Chun-Biu Li
    • Organizer
      2013 International Symposium on Nonlinear Theory and its Applications
    • Place of Presentation
      Santa Fe Community Convention Center(Santa Fe, USA)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] The Hidden Markov Modeling with Exact Information Content of Dwell-Time Time Series2013

    • Author(s)
      Chun-Biu Li
    • Organizer
      Complexity Sciences Center
    • Place of Presentation
      Physics Department, Univ. of California(Davis, USA)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 反応の運命を分ける反応性境界: 定義の一般化とH5+プロトン移動反応における反応性境界の抽出2013

    • Author(s)
      永幡 裕, 寺本 央, Chun-Biu Li, 河合 信之輔, 小松崎 民樹
    • Organizer
      第7回分子科学討論会2013京都
    • Place of Presentation
      京都テルサ(京都市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 時間スケールに依存して変化する実効自由度とエネルギー地形2013

    • Author(s)
      河合 信之輔,寺本 央,小松崎 民樹
    • Organizer
      第7回分子科学討論会2013京都
    • Place of Presentation
      京都テルサ(京都市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 反応座標切替機構の量子的兆候2013

    • Author(s)
      寺本央、戸田幹人、小松崎民樹
    • Organizer
      第7回分子科学討論会2013京都
    • Place of Presentation
      京都テルサ(京都市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 定常マルコフ連鎖から階層構造を抽出する際に生じる組み合わせ爆発2013

    • Author(s)
      永幡 裕, 寺本 央, 堀山 貴史, Chun-Biu Li, 小松崎 民樹
    • Organizer
      湊離散構造処理系プロジェクト ERATO セミナー
    • Place of Presentation
      北海道大学工学部(札幌市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 個々の軌道の振舞いとその集団分布の振舞いの関係~一軌道レベルでのスペクトル解析法とそれによる溶質分子と水の協同運動の抽出~2013

    • Author(s)
      寺本央、戸田幹人、小松崎民樹
    • Organizer
      第36回溶液化学シンポジウム プレシンポジウム
    • Place of Presentation
      北海道大学学術交流会館(札幌市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 天文学から生まれたカオスと化学動力学の出会い2013

    • Author(s)
      小松崎 民樹
    • Organizer
      Symposium on Cross-Talk between Chemistry and Planetary Sciences
    • Place of Presentation
      北海道大学電子科学研究所1階会議室(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Dynamic Disorder 再考:解析の虚実2013

    • Author(s)
      小松崎 民樹
    • Organizer
      研究会「理論と実験」2013
    • Place of Presentation
      広島大学理学部(東広島市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Let Systems Tell for themselves: Energy Landscape and Complex Network2013

    • Author(s)
      James N. Taylor, Shinnosuke Kawai, Chun Biu Li, Tamiki Komatsuzaki
    • Organizer
      Technologies for Medical Diagnosis and Therapy Symposium
    • Place of Presentation
      Academia Sinica(Taipei, Taiwan)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Toward the Decoding of Single Nucleotides Tunneling Current by Change Point Analysis2013

    • Author(s)
      Chun-Biu Li, Tamiki Komatsuzaki
    • Organizer
      Technologies for Medical Diagnosis and Therapy Symposium
    • Place of Presentation
      Academia Sinica(Taipei, Taiwan)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Inferring Kinetics Objectively from Single Molecule Time Series with Full Information Content2013

    • Author(s)
      Chun-Biu Li
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館(京都市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] A Multiscale Kinetic Scheme Extracted from EGFR-Grb2 Single Molecule Reaction2013

    • Author(s)
      Sultana Tahmina, Takagi Hiroaki, Morimatsu Miki, Teramoto Hiroshi, Li Chun-Biu, Sako Yasushi, Komatsuzaki Tamiki
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館(京都市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 一分子時系列から抽出されたマルコフ連鎖 定常ネットワーク における遷移確率が“最小”となる分子の“状態”の同定2013

    • Author(s)
      永幡 裕, 寺本 央, Li Chun-Biu, 小松崎 民樹
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館(京都市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] 分子イメージングから要素間の高次相互作用の定量化に向けて2013

    • Author(s)
      小松崎 民樹
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館(京都市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Coherent dynamics in colloidal fluids in terms of Lagrangian coherent structures (LCS)2013

    • Author(s)
      Nag Preetom, Teramoto Hiroshi, Li Chun-Biu, Komatsuzaki Tamiki
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館(京都市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Quantifying the absolute ATP concentration inside single bacteria cells2013

    • Author(s)
      Hideyuki Yaginuma, Shinnosuke Kawai, Keisuke Tomiyama, Kazuhito V. Tabata, Tamiki Komatsuzaki, Hiromi Imamura, Hiroyuki Noji
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館(京都市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] An Information-Theoretical approach to Local Equilibrium State Analysis for Single-Molecule Time-Series2013

    • Author(s)
      J. Nick Taylor, Li Chun-Biu, Kawai Shinnosuke, Komatsuzaki Tamiki
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館(京都市
    • Related Report
      2013 Annual Research Report
  • [Presentation] 力学系をみる二つの視点:軌道と分布の描像、の関係2013

    • Author(s)
      寺本央、戸田幹人、小松崎民樹
    • Organizer
      関東力学系セミナー
    • Place of Presentation
      一橋大学(国立市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 分子個性(Dynamic disorder):一分子生物学から産まれた新しい概念?2013

    • Author(s)
      小松崎 民樹
    • Organizer
      第2回バイオ単分子研究会
    • Place of Presentation
      つなぎ温泉 紫苑(盛岡市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] タンパク質一分子の計測から得られた定常マルコフ連鎖がもつ時間階層構造の理解に向けて2013

    • Author(s)
      永幡 裕, 寺本 央, Li Chun-Biu, 小松崎 民樹
    • Organizer
      ERATO湊離散構造処理系プロジェクト 「2013年度 秋のワークショップ」
    • Place of Presentation
      第一滝本館(登別市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Essential Coordinates to Describe the Dynamics of Many-atom Systems2013

    • Author(s)
      Shinnosuke Kawai, Hiroshi Teramoto, Tamiki Komatsuzaki
    • Organizer
      5th JCS International Symposium on Theoretical Chemistry
    • Place of Presentation
      Todai-ji Culture Center(Nara, Japan)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Extracting the Protein-folding Dynamics from Single Molecule Time Series2013

    • Author(s)
      Kunihiko Ibe, Hiroshi Teramoto, Chun-Biu Li, Tamiki Komatsuzaki
    • Organizer
      The 14th RIES-HOKUDAI International Symposium 網[mou]
    • Place of Presentation
      シャトレーゼガトーキングダムサッポロ(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Information of multi-order correlation in pattern formation2013

    • Author(s)
      Naoki Miyagawa, Hiroshi Teramoto, Chun-Biu Li, and Tamiki Komatsuzaki
    • Organizer
      The 14th RIES-HOKUDAI International Symposium 網[mou]
    • Place of Presentation
      シャトレーゼガトーキングダムサッポロ(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Coherent dynamics in colloidal fluids in terms of Lagrangian Coherent Structures (LCSs)2013

    • Author(s)
      Preetom Nag, Hiroshi Teramoto, Chun Biu Li, Tamiki Komatsuzaki
    • Organizer
      The 14th RIES-HOKUDAI International Symposium 網[mou]
    • Place of Presentation
      シャトレーゼガトーキングダムサッポロ(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Toward understanding hierarchical structure of complex reaction networks extracted from single molecule time series2013

    • Author(s)
      Yutaka Nagahata, Hiroshi Teramoto, Takashi Horiyama, Chun-Biu Li, Tamiki Komatsuzaki
    • Organizer
      The 14th RIES-HOKUDAI International Symposium 網[mou]
    • Place of Presentation
      シャトレーゼガトーキングダムサッポロ(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Scrutiny of Heterogeneity in Memory by Extracting Reaction Network Buried in Single Molecule Time Series of EGFR and Grb22013

    • Author(s)
      Tahmina Sultana, Hiroaki Takagi, Miki Morimatsu, Hiroshi Teramoto, Chun-Biu Li, Yasushi Sako, and Tamiki Komatsuzaki
    • Organizer
      The 14th RIES-HOKUDAI International Symposium 網[mou]
    • Place of Presentation
      シャトレーゼガトーキングダムサッポロ(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] An Information-Theoretical Approach to Local Equilibrium State Analysis for Single-Molecule Time-Series2013

    • Author(s)
      J. N. Taylor, C.B. Li, S. Kawai, and T. Komatsuzaki
    • Organizer
      The 14th RIES-HOKUDAI International Symposium 網[mou]
    • Place of Presentation
      シャトレーゼガトーキングダムサッポロ(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Relation between dynamics of individual trajectories and that of their ensemble distributions -Spectral Analysis of Individual Trajectories-2013

    • Author(s)
      Hiroshi Teramoto, Mikito Toda, Tamiki Komatsuzaki
    • Organizer
      The 14th RIES-HOKUDAI International Symposium 網[mou]
    • Place of Presentation
      シャトレーゼガトーキングダムサッポロ(札幌市)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Time Series, Networks and Dynamics: A Perspective from the Information Theory2013

    • Author(s)
      Chun-Biu Li
    • Organizer
      The 14th RIES-HOKUDAI International Symposium 網[mou]
    • Place of Presentation
      シャトレーゼガトーキングダムサッポロ(札幌市)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Book] パリティ11月号「ラグランジュ協同構造―流体の流れに隠れた骨格」2013

    • Author(s)
      Thomas Peacock, George Haller : 小松崎民樹 訳
    • Total Pages
      80
    • Publisher
      丸善出版株式会社
    • Related Report
      2013 Annual Research Report
  • [Book] Reaction Rate Constant Computations; Theories and Applications, CHAPTER7 "Dynamics of Chemical Reaction around a Saddle Point - What divides reacting and non-reacting trajectories?"2013

    • Author(s)
      Shinnosuke Kawai and Tamiki Komatsuzaki
    • Total Pages
      572
    • Publisher
      RSC Publishing
    • Related Report
      2013 Annual Research Report
  • [Remarks] Single Molecule Chemo-mechanics ...

    • URL

      http://www.oia.hokudai.ac.jp/blog/31871/

    • Related Report
      2015 Annual Research Report
  • [Remarks] 回転分子モーターF1-ATPase の化学-力学エネルギー変換におけるATP加水分解反応の役割解明!

    • URL

      http://www.es.hokudai.ac.jp/result/2015-12-18-mlns/

    • Related Report
      2015 Annual Research Report
  • [Remarks] 化学反応の行き先を変換する“切り替えスイッチ”の存在を解明

    • URL

      http://www.es.hokudai.ac.jp/result/2015-10-02-mlns/

    • Related Report
      2015 Annual Research Report
  • [Remarks] 北海道大学電子科学研究所分子生命数理研究分野HP

    • URL

      http://mlns.es.hokudai.ac.jp/

    • Related Report
      2014 Annual Research Report
  • [Remarks] プレス発表 ノイズを含むデータから分子の状態とそれらのネットワーク。。。

    • URL

      http://www.hokudai.ac.jp/pr/150318_es_pr.pdf

    • Related Report
      2014 Annual Research Report
  • [Remarks] ノイズを含むデータから分子の状態とそれらのネットワーク。。。

    • URL

      http://www.es.hokudai.ac.jp/result/2015-03-18-mlns/

    • Related Report
      2014 Annual Research Report
  • [Remarks] Novel method developed to extract ...

    • URL

      http://www.oia.hokudai.ac.jp/blog/2015/03/23/novel-method-developed-to-extract-molecular-states-and-their-network-from-noisy-single-molecule-time-series-data/

    • Related Report
      2014 Annual Research Report
  • [Remarks] 北海道大学電子科学研究所、分子生命数理研究分野ホームページ

    • URL

      http://mlns.es.hokudai.ac.jp/

    • Related Report
      2013 Annual Research Report
  • [Funded Workshop] Symposium #121 Deciphering molecular complexity from protein functions to cellular network (The 2015 International Chemical Congress of Pacific Basin Societies)2015

    • Place of Presentation
      Convention Center, Hawaii, USA
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
  • [Funded Workshop] Telluride Workshop on Geometry of Chemical Reaction Dynamics in Gas and Condensed Phases2015

    • Place of Presentation
      Telluride, CO, USA
    • Year and Date
      2015-07-27
    • Related Report
      2015 Annual Research Report
  • [Funded Workshop] Telluride Workshop on The Complexity of Dynamics and Kinetics from Single Molecules to Cells2015

    • Place of Presentation
      Telluride, CO, USA
    • Year and Date
      2015-06-14
    • Related Report
      2015 Annual Research Report

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Published: 2013-05-21   Modified: 2019-07-29  

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