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Impact of the Solar constant to deep-sea microbial community

Research Project

Project/Area Number 25287149
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Geochemistry/Cosmochemistry
Research InstitutionJapan Agency for Marine-Earth Science and Technology

Principal Investigator

TAKANO Yoshinori  国立研究開発法人海洋研究開発機構, 生物地球化学研究分野, 主任研究員 (80399815)

Co-Investigator(Renkei-kenkyūsha) KANEKO Masanori  国立研究開発法人産業技術総合研究所, 地圏資源環境研究部門, 主任研究員 (80633239)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥16,510,000 (Direct Cost: ¥12,700,000、Indirect Cost: ¥3,810,000)
Fiscal Year 2015: ¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2014: ¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2013: ¥6,760,000 (Direct Cost: ¥5,200,000、Indirect Cost: ¥1,560,000)
Keywords有機分子レベル解析・分子内レベル解析 / 海底下の地下生命圏 / 性状未知アーキアの生理生態 / ピルビン酸ファミリーアミノ酸族 / 液体クロマトグラフィー/質量分析法 / ガスクロマトグラフィー/質量分析法 / ガスクロマトグラフィー/同位体質量分析法 / ガスクロマトグラフィー/質量分析法 / ガスクロマトグラフィー/同位体質量分析法 / 有機分子 / 性状未知アーキア / 生理生態 / アミノ酸の窒素同位体比 / 従属栄養 / アミノ酸 / 代謝経路 / サルベージプロセス
Outline of Final Research Achievements

We conducted the method development using liquid chromatography and gas chromatography/ combustion/ isotope ratio mass spectrometry, occasionally coupled as LC x GC/C/IRMS to determine key molecules and their carbon/nitrogen isotopic compositions (e.g., lipids, amino acids, chlorophyll and other molecules). After the confirmation of high recovery during chromatographic separation without isotopic fractionation, we validated the accuracy and precision of the nitrogen isotopic composition of amino acids. To trace the metabolic pathways together with Enzyme Commission code, we customized the analytical scheme of the molecular sequencer including DNA and RNA pre-treatments.

Report

(4 results)
  • 2016 Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (36 results)

All 2016 2015 2014 2013 Other

All Int'l Joint Research (1 results) Journal Article (15 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 15 results,  Open Access: 7 results,  Acknowledgement Compliant: 8 results) Presentation (15 results) (of which Int'l Joint Research: 4 results,  Invited: 3 results) Book (1 results) Remarks (4 results)

  • [Int'l Joint Research] ドイツ連邦地質調査所/ブレーメン大学/マックスプランク研究所(ドイツ)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Estimation of methanogenesis by quantification of coenzyme F430 in marine sediments2016

    • Author(s)
      Kaneko, M., Takano, Y., Ogawa, N.O., Sato, Y., Yoshida, Y., Ohkouchi, N.
    • Journal Title

      GEOCHEMICAL JOURNAL

      Volume: 50 Issue: 6 Pages: 453-460

    • DOI

      10.2343/geochemj.2.0410

    • NAID

      130005435143

    • ISSN
      0016-7002, 1880-5973
    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] A diatom inferred record of lake hydrological variability during the last 900 years in Lutzow-Holm Bay, East Antarctica.2016

    • Author(s)
      Rudd, R.C., Tyler, J.J., Tibby, J., Yokoyama, Y., Tavernier, I., Verleyen, E., Fukui, M. and Takano, Y.
    • Journal Title

      Journal of Quaternary Science

      Volume: -

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Exploring deep microbial life in coal-bearing sediments down to ~2.5km below the seafloor2015

    • Author(s)
      INAGAKI FUMIO, Kai-Uwe Hinrichs,KUBO YUSUKE,Marshall W. Bowles,Verena B. Heuer,Wei-Li Hong,HOSHINO TATSUHIKO,IJIRI AKIRA,IMACHI HIROYUKI,ITO MOTOO,KANEKO MASANORI,Mark A. Lever,Lin Yu-Shin,Barbara A. Methe,Morita Sumito,MORONO YUKI,et al.
    • Journal Title

      SCIENCE/AAAS/

      Volume: 349 Issue: 6246 Pages: 420-424

    • DOI

      10.1126/science.aaa6882

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Diet quality influences isotopic discrimination among amino acids in an aquatic vertebrate2015

    • Author(s)
      Chikaraishi Y., Steffan S.A., Takano Y., Ohkouchi N.
    • Journal Title

      Ecology and Evolution

      Volume: 印刷中 Issue: 10 Pages: 2048-2059

    • DOI

      10.1002/ece3.1491

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Biogeochemistry and limnology in Antarctic subglacial weathering: molecular evidence of the linkage between subglacial silica input and primary producers in a perennially ice-covered lake2015

    • Author(s)
      Takano, Y., Kojima, H., Takeda, E., Yokoyama, Y., Fukui, M.
    • Journal Title

      Progress in Earth and Planetary Science

      Volume: 2 Issue: 1 Pages: 8-8

    • DOI

      10.1186/s40645-015-0036-7

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Isolation of underivatized amino acids by ion-pair high performance liquid chromatography for precise measurement of nitrogen isotopic composition of amino acids: development of comprehensive LC x GC/C/IRMS method.2015

    • Author(s)
      Takano, Y., Chikaraishi, Y. and Ohkouchi, N.
    • Journal Title

      International Journal of Mass Spectrometry

      Volume: 379 Pages: 16-25

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] イオンペアクロマトグラフィー/電子スプレーイオン化質量分析法 (LC/ESI-MS)によるアミノ酸のマススペクトル解析 [技術論文].2015

    • Author(s)
      高野 淑識, 力石 嘉人, 大河内 直彦
    • Journal Title

      Researches in Organic Geochemistry

      Volume: 31 Pages: 33-49

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Isolation of underivatized amino acids by ion-pair high performance liquid chromatography for precise measurement of nitrogen isotopic composition of amino acids: development of comprehensive LC x GC/C/IRMS method2015

    • Author(s)
      Takano, Y., Chikaraishi, Y., Ohkouchi, N.
    • Journal Title

      International Journal of Mass Spectrometry

      Volume: 379 Pages: 16-25

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] マントルゼノリスの炭素と窒素の起源について(依頼総説)2015

    • Author(s)
      高野 淑識・大河内 直彦
    • Journal Title

      地学雑誌

      Volume: -

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Quantitative analysis of coenzyme F430 in environmental samples: a new diagnostic tool for methanogenesis and anaerobic methane oxidation2014

    • Author(s)
      Kaneko, M., Takano, Y., Chikaraishi, Y., Ogawa, N.O., Asakawa, S., Watanabe, K., Shima, S., Krueger, M., Matsushita, M., Kimura, H., Ohkouchi, N.
    • Journal Title

      Analytical Chemistry

      Volume: 86 Issue: 7 Pages: 3633-3638

    • DOI

      10.1021/ac500305j

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Organic nitrogen: sources, fates, and chemistry. Treatise on Geochemistry, 10: Organic Geochemistry2014

    • Author(s)
      Ohkouchi, N. and Takano, Y.
    • Journal Title

      Treatise on Geochemistry

      Volume: 12 Pages: 251-289

    • DOI

      10.1016/b978-0-08-095975-7.01015-9

    • ISBN
      9780080983004
    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Detection of coenzyme F430 in deep-sea sediments: A key molecule for biological methanogenesis.2013

    • Author(s)
      Takano, Y., Kaneko, M., Kahnt, J., Imachi, H., Shima, S. and Ohkouchi, N.
    • Journal Title

      Organic Geochemistry

      Volume: 58 Pages: 137-140

    • DOI

      10.1016/j.orggeochem.2013.01.012

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] An interlaboratory study of TEX86 and BIT analysis of sediments, extracts and standard mixtures2013

    • Author(s)
      Schouten, S., Hopmans, E.C., Rosell-Mele, A., Pearson, A. et al. (including Takano, Y. and Ohkouchi, N.)
    • Journal Title

      Geochemistry, Geophysics, Geosystems

      Volume: 14 Issue: 12 Pages: 5263-5285

    • DOI

      10.1002/2013gc004904

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Diversity of sulfur-cycle prokaryotes in freshwater lake sediments investigated using aprA as functional marker gene2013

    • Author(s)
      Watanabe, T., Kojima, H., Takano, Y., and Fukui, M.
    • Journal Title

      Systematics and Applied Microbiology

      Volume: 36 Issue: 6 Pages: 436-443

    • DOI

      10.1016/j.syapm.2013.04.009

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Distribution and isotopic signatures of archaeal lipid biomarkers associated with gas hydrate occurrences on the northern Cascadia Margin.2013

    • Author(s)
      Kaneko, M., Naraoka, H., Takano, Y. and Ohkouchi, N.
    • Journal Title

      Chemical Geology

      Volume: 343 Pages: 76-84

    • DOI

      10.1016/j.chemgeo.2013.02.003

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] Amino acids in deep-sea archaeal methanotrophy: new insight for lipid and methane biogeochemistry2015

    • Author(s)
      Yoshinori Takano, Yoshito Chikaraishi , Hiroyuki Imachi, Masanori Kaneko, Nanako O. Ogawa, Martin Kruger, and Naohiko Ohkouchi
    • Organizer
      International Meeting on Organic Geochemistry
    • Place of Presentation
      プラハ国際会議場(チェコ)
    • Year and Date
      2015-09-22
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] How do microbes mediate the nitrogen cycle in the marine subseafloor?2015

    • Author(s)
      N. Ohkouchi, Y. Yamaguchi, Y. Chikaraishi, Y. Takano, N.O. Ogawa, H. Suga, and Y. Yokoyama
    • Organizer
      International Meeting on Organic Geochemistry
    • Place of Presentation
      プラハ国際会議場(チェコ)
    • Year and Date
      2015-09-02
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Carbon isotopic composition of Coenzyme F430 from anaerobic methane oxidizing archaea2015

    • Author(s)
      MASANORI KANEKO*1, YOSHINORI TAKANO2, NANAKO O. OGAWA2, NAOHIKO OHKOUCHI2
    • Organizer
      Goldschmidt2015
    • Place of Presentation
      プラハ国際会議場(チェコ)
    • Year and Date
      2015-08-18
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 海底下メタンの行方と地球生命科学2015

    • Author(s)
      高野 淑識・力石 嘉人・大河内 直彦
    • Organizer
      JpGU2015
    • Place of Presentation
      幕張メッセ(千葉県千葉市)
    • Year and Date
      2015-05-25
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] アミノ酸の窒素同位体比からみた植物の従属栄養2014

    • Author(s)
      力石嘉人・高野淑識・大河内直彦
    • Organizer
      2014年有機地球化学シンポジウム
    • Place of Presentation
      ニューウエルシティ湯河原(熱海市)
    • Year and Date
      2014-11-05
    • Related Report
      2014 Annual Research Report
  • [Presentation] LC-MS 分析時の夾雑物の影響-F430 の定量・同位体分析のために2014

    • Author(s)
      金子 雅紀・高野 淑識・小川 奈々子・大河内 直彦
    • Organizer
      2014年有機地球化学シンポジウム
    • Place of Presentation
      ニューウエルシティ湯河原(熱海市)
    • Year and Date
      2014-11-05
    • Related Report
      2014 Annual Research Report
  • [Presentation] 南海トラフ地域におけるメタン生成補酵素F430 の分布2014

    • Author(s)
      佐藤友規・金子雅紀・高野淑識・大河内直彦・山田桂大・吉田尚弘
    • Organizer
      2014年有機地球化学シンポジウム
    • Place of Presentation
      ニューウエルシティ湯河原(熱海市)
    • Year and Date
      2014-11-05
    • Related Report
      2014 Annual Research Report
  • [Presentation] C4植物の有機態窒素利用:アミノ酸の同位体比解析から得られた証拠2014

    • Author(s)
      力石嘉人,高野淑識,大河内直彦
    • Organizer
      2014年 日本地球化学会
    • Place of Presentation
      富山大学(富山市)
    • Year and Date
      2014-09-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] 南極スカルブスネス露岩地域に分布する湖沼の堆積物のバイオマーカーに記録された古環境・古生態系変動2014

    • Author(s)
      竹田真佑美,沢田 健,高野 淑識
    • Organizer
      2014年 日本地球化学会
    • Place of Presentation
      富山大学(富山市)
    • Year and Date
      2014-09-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] 有機分子から見えてくる性状未知アーキアの生理生態とメタンのダイナミクス2014

    • Author(s)
      高野 淑識
    • Organizer
      2014年水環境学会シンポジウム
    • Place of Presentation
      滋賀県立大(彦根市)
    • Year and Date
      2014-09-09
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] アミノ酸の安定同位体比を正確かつ感度良く測定するための分析法2014

    • Author(s)
      力石 嘉人, 高野 淑識, 大河内 直彦
    • Organizer
      2014年 日本地球惑星科学連合大会
    • Place of Presentation
      パシフィコ横浜(横浜市)
    • Year and Date
      2014-05-01
    • Related Report
      2014 Annual Research Report
  • [Presentation] 海底下メタン生成研究への新しいアプローチ法2014

    • Author(s)
      金子 雅紀, 高野 淑識, 大河内 直彦
    • Organizer
      2014年 日本地球惑星科学連合大会
    • Place of Presentation
      パシフィコ横浜(横浜市)
    • Year and Date
      2014-05-01
    • Related Report
      2014 Annual Research Report
  • [Presentation] 有機物から最大限の情報を引き出すために2014

    • Author(s)
      大河内 直彦, 力石 嘉人, 高野 淑識, 小川 奈々子
    • Organizer
      2014年 日本地球惑星科学連合大会
    • Place of Presentation
      パシフィコ横浜(横浜市)
    • Year and Date
      2014-05-01
    • Related Report
      2014 Annual Research Report
  • [Presentation] イオンペアクロマトグラフィー/電子スプレーイオン化質量分析法およびコロナCAD検出法の有機地球化学への応用(口頭発表)2013

    • Author(s)
      高野 淑識, 力石 嘉人, 大河内 直彦
    • Organizer
      日本有機地球化学会
    • Place of Presentation
      岡山県・倉敷市(芸文館)
    • Related Report
      2013 Annual Research Report
  • [Presentation] Possible energetic linkage between primary production and deep-sea benthic archaea: insight from biogeochemical lipidomics(招待講演)2013

    • Author(s)
      Takano, Y. and Ohkouchi, N.
    • Organizer
      EGU2013
    • Place of Presentation
      オーストリア国・ウイーン(Wien Kaisermuhlen/VIC)
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Book] バイオサイエンスシリーズ「アストロバイオロジー」(山岸 明彦 編)2013

    • Author(s)
      高野 淑識・関根 康人(分担執筆)
    • Publisher
      化学同人
    • Related Report
      2013 Annual Research Report
  • [Remarks] 国立研究開発法人 海洋研究開発機構 生物地球化学研究分野

    • URL

      http://www.jamstec.go.jp/biogeochem/

    • Related Report
      2015 Annual Research Report
  • [Remarks] 高野 淑識(主任研究員)

    • URL

      http://www.jamstec.go.jp/res/ress/takano/

    • Related Report
      2015 Annual Research Report
  • [Remarks] 海洋研究開発機構 生物地球化学研究分野

    • URL

      http://www.jamstec.go.jp/biogeochem/

    • Related Report
      2014 Annual Research Report
  • [Remarks] 海洋研究開発機構 生物地球化学研究分野

    • URL

      http://www.jamstec.go.jp/biogeos/j/elhrp/biogeochem/

    • Related Report
      2013 Annual Research Report

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Published: 2013-05-21   Modified: 2019-07-29  

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