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Establishment of screening method on intracellular functional peptides by cell array technology

Research Project

Project/Area Number 25289292
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Biofunction/Bioprocess
Research InstitutionNagoya University

Principal Investigator

HONDA HIROYUKI  名古屋大学, 予防早期医療創成センター, 教授 (70209328)

Co-Investigator(Kenkyū-buntansha) 加藤 竜司  名古屋大学, 創薬科学研究科, 准教授 (50377884)
大河内 美奈  名古屋大学, 工学(系)研究科(研究院), 准教授 (70313301)
Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥17,420,000 (Direct Cost: ¥13,400,000、Indirect Cost: ¥4,020,000)
Fiscal Year 2015: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Fiscal Year 2014: ¥6,760,000 (Direct Cost: ¥5,200,000、Indirect Cost: ¥1,560,000)
Fiscal Year 2013: ¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Keywordsペプチド / ライブラリー / 細胞アレイ / 探索 / 分析
Outline of Final Research Achievements

Cell death inducing peptide was explored from CPP(cell penetrating peptide) conjugated peptide library and effective cell death of MCF-7 was observed for newly designed octamer peptide, LNLIWKLF, in which fifth amino acid, serine, of the original peptide was substituting to tryptophan and it’s activity was approximately 4 times higher compared with that of the original peptide. When serine residue was replaced to hydrophobic amino acid, F, V, and Y, cell death activity was also further increased. In the case of cell-cycle targeting peptide, newly designed peptide with higher activity was also successfully designed. In addition, minimized peptide library for screening was studied based on 4 amino acid groups categorized from 20 amino acids. Using 2 sets of 256 tetramer peptides, IL-2 binding peptide was assigned and high binding role was identified by principal component analysis. It was found that acquired role could be utilized for screening of octamer functional peptides.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (14 results)

All 2017 2016 2015 2014 2013

All Journal Article (6 results) (of which Peer Reviewed: 6 results,  Open Access: 6 results,  Acknowledgement Compliant: 2 results) Presentation (8 results)

  • [Journal Article] Exploring high-affinity binding properties of octamer peptides by principal component analysis of tetramer peptides2017

    • Author(s)
      Akiko Kume, Shun Kawai, Ryuji Kato, Shinmei Iwata, Kazunori Shimizu, and Hiroyuki Honda
    • Journal Title

      Journal of Bioscience and Bioengineering

      Volume: 123 Issue: 2 Pages: 230-238

    • DOI

      10.1016/j.jbiosc.2016.08.005

    • NAID

      40021112619

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Development of a tactical screening method to investigate the characteristics of functional peptides2016

    • Author(s)
      Akiko Kume, Mina Okochi, Kazunori Shimizu, Yasuko Yoshida, and Hiroyuki Honda
    • Journal Title

      Biotechnology and Bioprocess Engineering

      Volume: 21 Issue: 1 Pages: 119-127

    • DOI

      10.1007/s12257-015-0523-0

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Proposal of peptide array system suitable for screening intracellular functional peptides2015

    • Author(s)
      Ryo Matsumoto, Mina Okochi, Kazunori Shimizu, Kei Kanie, Ryuji Kato, Hiroyuki Honda
    • Journal Title

      Scientific Reports

      Volume: 5 Issue: 1 Pages: 12884-12884

    • DOI

      10.1038/srep12884

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A molecular peptide beacon for IgG detection.2015

    • Author(s)
      Mina Okochi, Tomoya Sugita, Masayoshi Tanaka, Hiroyuki Honda
    • Journal Title

      RSC Adv.

      Volume: 5 Issue: 112 Pages: 91988-91992

    • DOI

      10.1039/c5ra15174k

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Design of Quenching Peptide Probes Incorporating Tryptophan for Rapid IgG Detection2014

    • Author(s)
      Tomoya Sugita, Mina Okochi, and Hiroyuki Honda
    • Journal Title

      Chemistry Letters

      Volume: 43(4) Issue: 4 Pages: 550-552

    • DOI

      10.1246/cl.131136

    • NAID

      130004868079

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Effect of Vascular Formed Endothelial Cell Network on the Invasive Capacity of Melanoma Using the In Vitro 3D Co-Culture Patterning Mode2014

    • Author(s)
      Shuhei Yamamoto, Michael Masakuni Hotta, Mina Okochi, Hiroyuki Honda
    • Journal Title

      PLOS ONE

      Volume: 9(7) Issue: 7 Pages: e103502-e103502

    • DOI

      10.1371/journal.pone.0103502

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] 切断リンカーを利用した細胞内機能性ペプチド探索系の確立2016

    • Author(s)
      小﨑一功、清水一憲、松本 凌、田邊智哉、本多裕之
    • Organizer
      第68回日本生物工学会大会
    • Place of Presentation
      富山国際会議場-ANAクラウンプラザ富山(富山市)
    • Year and Date
      2016-09-28
    • Related Report
      2016 Annual Research Report
  • [Presentation] 短鎖ペプチドの物理化学特徴に基づく長鎖機能性ペプチドの探索とデザイン2016

    • Author(s)
      岩田晋明、久米暁子、河合 駿、加藤竜司、清水一憲、本多裕之
    • Organizer
      第68回日本生物工学会大会
    • Place of Presentation
      富山国際会議場-ANAクラウンプラザ富山(富山市)
    • Year and Date
      2016-09-28
    • Related Report
      2016 Annual Research Report
  • [Presentation] 新規細胞内機能性ペプチド探索系の開発 ―CPP-ペプチド複合体の細胞内導入効率に対するペプチド配列の影響―2015

    • Author(s)
      松本 凌、清水一憲、大河内美奈、本多裕之
    • Organizer
      第31回日本DDS学術集会
    • Place of Presentation
      京王プラザホテル(東京)
    • Year and Date
      2015-07-02
    • Related Report
      2015 Annual Research Report
  • [Presentation] ペプチド探索のためのCPP結合ペプチドライブラリーの作成2014

    • Author(s)
      松本凌、大河内美奈、本多裕之
    • Organizer
      第66回日本生物工学会大会
    • Place of Presentation
      札幌コンベンションセンター(札幌)
    • Year and Date
      2014-09-09 – 2014-09-11
    • Related Report
      2014 Annual Research Report
  • [Presentation] 細胞内機能性ペプチド探索のためのCPP結合ペプチドライブラリーの作成2014

    • Author(s)
      松本凌、大河内美奈、本多裕之
    • Organizer
      生物工学若手研究者の集い(若手会)夏のセミナー
    • Place of Presentation
      神戸市立神戸セミナーハウス(神戸)
    • Year and Date
      2014-07-12 – 2014-07-13
    • Related Report
      2014 Annual Research Report
  • [Presentation] 磁磁気細胞パターニング法を用いた血管内皮細胞近傍でのがん細胞の浸潤能及び遺伝子発現解析2014

    • Author(s)
      山本修平,大河内美奈,本多裕之
    • Organizer
      化学工学会第79年会
    • Place of Presentation
      岐阜大学
    • Related Report
      2013 Annual Research Report
  • [Presentation] 磁気細胞パターニング法を用いたがん細胞の薬剤応答評価法の構2013

    • Author(s)
      山本修平,大河内美奈,本多裕之
    • Organizer
      化学工学会 第45回秋季大会
    • Place of Presentation
      岡山大学
    • Related Report
      2013 Annual Research Report
  • [Presentation] 磁気細胞パターニング法を用いた抗がん剤に対するがん細胞の応答評価2013

    • Author(s)
      山本修平,大河内美奈,本多裕之
    • Organizer
      第51回日本生体医工学会
    • Place of Presentation
      東京大学生産技術研究所
    • Related Report
      2013 Annual Research Report

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Published: 2013-05-21   Modified: 2019-07-29  

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