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The molecular basis of circadian clock in plants: The origin, evolution, diversity

Research Project

Project/Area Number 25291075
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Genetics/Chromosome dynamics
Research InstitutionNagoya University

Principal Investigator

Ishiura Masahiro  名古屋大学, 遺伝子実験施設, 名誉教授 (20132730)

Co-Investigator(Kenkyū-buntansha) 松尾 拓哉  名古屋大学, 遺伝子実験施設, 講師 (00452201)
Co-Investigator(Renkei-kenkyūsha) Onai Kiyoshi  京都大学, 農学研究科, 特任准教授 (00402454)
Mino Hiroyuki  名古屋大学, 理学研究科, 准教授 (70300902)
Namba Keiichi  大阪大学, 生命機能研究科, 教授 (30346142)
Ikegami Takahisa  横浜市立大学, 生命医学研究科, 教授 (20283939)
Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥17,680,000 (Direct Cost: ¥13,600,000、Indirect Cost: ¥4,080,000)
Fiscal Year 2015: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2014: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Fiscal Year 2013: ¥6,630,000 (Direct Cost: ¥5,100,000、Indirect Cost: ¥1,530,000)
Keywords生物時計 / 植物 / 進化 / 藍色細菌 / 緑藻 / 高等植物 / 陸上植物
Outline of Final Research Achievements

From cyanobacteria to human, most organisms on the earth have the circadian clock. However, clock genes, essential genes for the clock, are not conserved during evolution of organisms. In this study, we analyzed the three circadian clocks from cyanobacteria, green algae, higher plants, and revealed common and different features of these clocks. This outcome contributes to understanding the evolution of circadian clocks.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (28 results)

All 2017 2016 2015 2014 2013

All Journal Article (9 results) (of which Peer Reviewed: 9 results,  Open Access: 3 results,  Acknowledgement Compliant: 3 results) Presentation (19 results) (of which Int'l Joint Research: 1 results,  Invited: 2 results)

  • [Journal Article] CSL encodes a leucine-rich-repeat protein implicated in red/violet light signaling to the circadian clock in Chlamydomonas.2017

    • Author(s)
      Kinoshita A, Niwa Y, Onai K, Yamano T, Fukuzawa H, Ishiura M, Matsuo T.
    • Journal Title

      PLoS Genet.

      Volume: 23 Issue: 3 Pages: e1006645-e1006645

    • DOI

      10.1371/journal.pgen.1006645

    • NAID

      120005998025

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Circadian oscillations of KaiA-KaiC and KaiB-KaiC complex formations in an in vitro reconstituted KaiABC clock oscillator.2016

    • Author(s)
      Murakami R, Mutoh R, Ishii K, Ishiura M.
    • Journal Title

      Genes Cells.

      Volume: 21 Issue: 8 Pages: 890-900

    • DOI

      10.1111/gtc.12392

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Importance of the monomer-dimer-tetramer interconversion of the clock protein KaiB in the generation of circadian oscillations in cyanobacteria2015

    • Author(s)
      Iida T, Mutoh, R, Onai, K, Morishita, M, Furukawa, Y, Namba, K, Ishiura, M
    • Journal Title

      Genes Cells

      Volume: 20 Issue: 3 Pages: 173-90

    • DOI

      10.1111/gtc.12211

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Site-directed spin labeling-ESR mapping of the residues of cyanobacterial clock protein KaiA that are affected by KaiA-KaiC interaction.2014

    • Author(s)
      Ishii K, Terauchi S, Murakami R, Valencia Swain J, Mutoh R, Mino H, Maid K, Arata T, Ishiura M
    • Journal Title

      Genes Cells

      Volume: 19 Issue: 4 Pages: 297-324

    • DOI

      10.1111/gtc.12130

    • Related Report
      2014 Annual Research Report 2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] High-throughput phenotyping of Chlamydomonas swimming mutants based on nanoscale video analysis2014

    • Author(s)
      Fujita S, Matsuo T, Ishiura M, and Kikkawa M
    • Journal Title

      Biophys J

      Volume: 107 Issue: 2 Pages: 336-45

    • DOI

      10.1016/j.bpj.2014.05.033

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Comparative analysis of kdp and ktr mutants reveals distinct roles of the potassium transporters in the model cyanobacterium Synechocystis sp. PCC 68032014

    • Author(s)
      Nanatani, K., Shijuku, T., Takano, Y., Zulkifli, L., Yamazaki, Y., Tominaga, A., Souma, S., Onai, K., Morishita, M., Ishiura, M., Hagemann, M., Suzuki, I., Maruyama, H., Arai, F., Uozumi, N.
    • Journal Title

      J. Bacteriology

      Volume: - Issue: 4 Pages: 676-87

    • DOI

      10.1128/jb.02276-14

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] The ATP-mediated regulation of KaiB-KaiC interaction in the cyanobacterial circadian clock.2013

    • Author(s)
      Mutoh R, Nishimura A, Yasui S, Onai K, Ishiura M
    • Journal Title

      PLOS ONE

      Volume: 8 Issue: 11 Pages: e80200-e80200

    • DOI

      10.1371/journal.pone.0080200

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A phase-resetting mechanism of the circadian clock in Chlamydomonas reinhardtii2013

    • Author(s)
      Niwa Y, Matsuo T, Onai K, Kato D, Tachikawa M, Ishiura M
    • Journal Title

      Proc. Natl. Acad. Sci. USA

      Volume: 110 Issue: 33 Pages: 13666-13671

    • DOI

      10.1073/pnas.1220004110

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Characterization of the role of a mechanosensitive channel in osmotic down shock adaptation in Synechocystis sp. PCC 68032013

    • Author(s)
      Nanatani K, Shijuku T, Akai M, Yukutake Y, Yasui M, Onai K, Morishita M, Ishiura M, Uozumi N
    • Journal Title

      Channels

      Volume: 7 Issue: 4 Pages: 238-242

    • DOI

      10.4161/chan.25350

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] Existence of a red/violet light signaling pathway involved in resetting of circadian clock in Chlamydomonas.2016

    • Author(s)
      Ayumi Kinoshita, Takuya Matsuo, Kiyoshi Onai, Takashi Yamano, Hideya Fukuzawa, Masahiro Ishiura
    • Organizer
      17TH INTERNATIONAL MEETING CELL & MOLECULAR BIOLOGY OF CHLAMYDOMONAS
    • Place of Presentation
      Kyoto International Conference Center
    • Year and Date
      2016-06-26
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 緑藻クラミドモナスのROC75は概日時計の昼位相の制御に重要な因子である。2015

    • Author(s)
      松尾拓哉、飯田高広、武藤梨沙、加藤大策、木下亜有美、石浦正寛
    • Organizer
      第22回日本時間生物学会学術大会
    • Place of Presentation
      東京大学本郷キャンパス
    • Year and Date
      2015-11-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] 緑藻クラミドモナスの時計タンパク質ROC15の光誘導性分解に関わる遺伝子の同定2015

    • Author(s)
      木下亜有美、松尾拓哉、丹羽由実、山野隆志、福澤秀哉、石浦正寛
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      東北大学川内北キャンパス
    • Year and Date
      2015-09-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] 緑藻クラミドモナスの時計タンパク質ROC15の光誘導性分解に関わる遺伝子の同定2015

    • Author(s)
      木下亜有美、松尾拓哉、丹羽由実、山野隆志、福澤秀哉、石浦正寛
    • Organizer
      第12回クラミドモナス研究会
    • Place of Presentation
      中央大学後楽園キャンパス
    • Year and Date
      2015-09-03
    • Related Report
      2015 Annual Research Report
  • [Presentation] 緑藻クラミドモナスの時計タンパク質ROC15の光誘導性分解に関わる遺伝子の同定2015

    • Author(s)
      木下亜有美、松尾拓哉、丹羽由実、山野隆志、福澤秀哉、石浦正寛
    • Organizer
      第56回日本植物生理学会年会
    • Place of Presentation
      東京農業大学世田谷キャンパス
    • Year and Date
      2015-03-16 – 2015-03-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] クラミドモナスの時計蛋白質ROC15の光誘導性分解に関わる遺伝子の同定2014

    • Author(s)
      木下亜有美、松尾拓哉、丹羽由実、山野隆志、福澤秀哉、石浦正寛
    • Organizer
      微細藻類研究会2014
    • Place of Presentation
      岡崎コンファレンスセンター
    • Year and Date
      2014-12-22 – 2014-12-23
    • Related Report
      2014 Annual Research Report
  • [Presentation] クラミドモナスの時計タンパク質ROC15の光誘導性分解に関わる遺伝子の解析2014

    • Author(s)
      木下亜有美、松尾拓哉、丹羽由実、山野隆志、福澤秀哉、石浦正寛
    • Organizer
      第21回日本時間生物学会学術大会
    • Place of Presentation
      九州大学医学部百年講堂
    • Year and Date
      2014-11-08 – 2014-11-09
    • Related Report
      2014 Annual Research Report
  • [Presentation] 単細胞緑藻クラミドモナスの時計タンパク質ROC75の解析2014

    • Author(s)
      松尾拓哉、加藤大策、武藤梨沙、石浦正寛
    • Organizer
      第11回クラミドモナス研究会「Go! Microalgae」
    • Place of Presentation
      高知市文化プラザかるぽーと
    • Year and Date
      2014-10-03 – 2014-10-04
    • Related Report
      2014 Annual Research Report
  • [Presentation] クラミドモナスの概日時計の時刻調節機構2014

    • Author(s)
      丹羽由実、松尾拓哉、小内清、加藤大策、立川誠、石浦正寛
    • Organizer
      第11回クラミドモナス研究会「Go! Microalgae」
    • Place of Presentation
      高知市文化プラザかるぽーと
    • Year and Date
      2014-10-03 – 2014-10-04
    • Related Report
      2014 Annual Research Report
  • [Presentation] クラミドモナスの時計タンパク質ROC15の光誘導性分解に関わる遺伝子の解析2014

    • Author(s)
      木下亜有美, 松尾拓哉, 丹羽由実, 山野隆志, 福澤秀哉, 石浦正寛
    • Organizer
      第11回クラミドモナス研究会「Go! Microalgae」
    • Place of Presentation
      高知市文化プラザかるぽーと
    • Year and Date
      2014-10-03 – 2014-10-04
    • Related Report
      2014 Annual Research Report
  • [Presentation] 単細胞緑藻クラミドモナスの概日時計におけるROC15タンパク質の役割2014

    • Author(s)
      丹羽由実、木下亜有美、松尾拓哉、小内清、加藤大策、立川誠、石浦正寛
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山大学五福キャンパス
    • Related Report
      2013 Annual Research Report
  • [Presentation] 単細胞緑藻クラミドモナスにおける生物時計の位相リセッティング機構2013

    • Author(s)
      丹羽由実、松尾拓哉、小内清、立川誠、加藤大策、石浦正寛
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸国際会議場
    • Related Report
      2013 Annual Research Report
  • [Presentation] 単細胞緑藻クラミドモナスの時計タンパク質ROC75の解析2013

    • Author(s)
      松尾拓哉、加藤大策、武藤梨沙、石浦正寛
    • Organizer
      第10回クラミドモナス研究会
    • Place of Presentation
      自然科学研究機構基礎生物学研究所
    • Related Report
      2013 Annual Research Report
  • [Presentation] クラミドモナス時計タンパク質ROC15の光誘導性の分解に関わる遺伝子の同定2013

    • Author(s)
      木下亜有美、松尾拓哉、丹羽由実、石浦正寛
    • Organizer
      第10回クラミドモナス研究会
    • Place of Presentation
      自然科学研究機構基礎生物学研究所
    • Related Report
      2013 Annual Research Report
  • [Presentation] Phase-resetting mechanism of circadian clock in Chlamydomonas reinhardtii2013

    • Author(s)
      丹羽由実、松尾拓哉、小内清、加藤大策、立川誠、石浦正寛
    • Organizer
      第10回クラミドモナス研究会
    • Place of Presentation
      自然科学研究機構基礎生物学研究所
    • Related Report
      2013 Annual Research Report
  • [Presentation] クラミドモナスからクラミドモナスへ2013

    • Author(s)
      石浦正寛
    • Organizer
      第10回クラミドモナス研究会
    • Place of Presentation
      自然科学研究機構基礎生物学研究所
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 単細胞緑藻クラミドモナスの時計タンパク質ROC75の解析2013

    • Author(s)
      松尾拓哉、加藤大策、武藤梨沙、石浦正寛
    • Organizer
      第20回日本時間生物学会年会
    • Place of Presentation
      近畿大学11月ホール
    • Related Report
      2013 Annual Research Report
  • [Presentation] クラミドモナス時計タンパク質ROC15の光誘導性の分解に関わる遺伝子の同定2013

    • Author(s)
      木下亜有美、松尾拓哉、丹羽由実、石浦正寛
    • Organizer
      第20回日本時間生物学会年会
    • Place of Presentation
      近畿大学11月ホール
    • Related Report
      2013 Annual Research Report
  • [Presentation] 生物発光リアルタイム測定解析システムの開発と活用・普及促進2013

    • Author(s)
      小内清、石浦正寛
    • Organizer
      JASIS 2013コンファレンス
    • Place of Presentation
      幕張メッセ国際会議場
    • Related Report
      2013 Annual Research Report
    • Invited

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Published: 2013-05-21   Modified: 2019-07-29  

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