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Evolution of biological systems and environmental changes: Understanding adaptation mechanisms to environmental changes which are inscribed in the human genome

Research Project

Project/Area Number 25291081
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Evolutionary biology
Research InstitutionThe Graduate University for Advanced Studies

Principal Investigator

Satta Yoko  総合研究大学院大学, 先導科学研究科, 教授 (20222010)

Co-Investigator(Kenkyū-buntansha) HAYAKAWA Toshiyuki  九州大学, 基幹教育院, 准教授 (80418681)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥17,550,000 (Direct Cost: ¥13,500,000、Indirect Cost: ¥4,050,000)
Fiscal Year 2015: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Fiscal Year 2014: ¥5,980,000 (Direct Cost: ¥4,600,000、Indirect Cost: ¥1,380,000)
Fiscal Year 2013: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Keywords環境適応 / 疾患関連遺伝子 / 自然選択 / リスク転換 / 祖先型 / EHH解析 / プロモータ活性 / 1000人ゲノム / 東アジア集団 / 脱アフリカ / 疾患関連SNP / ハプロタイプ / 疾病関連遺伝子 / リスク型・非リスク型 / 霊長類 / 遺伝子 / 環境変異 / リスク型 / 固定
Outline of Final Research Achievements

In life-style related diseases or mental disorders, environmental factors may often play significant roles. Curiously, genes associated with such diseases often carry ancestral but risk types of SNPs in humans. To test the rather paradoxical idea of “ancestral risk,” we examined polymorphism at and near the STX locus in relation to the evolutionary mechanisms acting at the locus. STX encodes a sialyltrasferase that produces poly-sialic acids that play an important role in brain function. In the promoter region of the gene, three SNPs are associated with Schizophrenia. Four promoter types of these SNP combinations are known to highly correlate with the promoter activity. An ancestral risk type shows the high activity. In contrast, one non-risk type has the low promoter activity and it shows an unusually high frequency in East Asians but the low genetic diversity within the type. Population genomics suggests positive selection acting on the derived non-risk type of the STX promoter.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (8 results)

All 2015 2014 Other

All Presentation (8 results) (of which Int'l Joint Research: 1 results,  Invited: 2 results)

  • [Presentation] 現生人類のユーラシアへの移住におけるシアル酸転移酵素STXの低活性プロモータータイプの適応拡散2015

    • Author(s)
      藤戸尚子、颯田葉子、羽根正弥、松井淳、北島健、佐藤ちひろ、早川敏之
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      東北大学川内北キャンパス
    • Year and Date
      2015-09-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] シアル酸転移酵素 ST8Sia2にみる現生人類のユーラ シアへの移動での精神適応2015

    • Author(s)
      藤戸尚子、颯田葉子、羽根正弥、松井淳、北島健、佐藤ちひろ、早川敏之
    • Organizer
      日本進化学会第17回大会
    • Place of Presentation
      中央大学後楽園キャンパス
    • Year and Date
      2015-08-20
    • Related Report
      2015 Annual Research Report
  • [Presentation] Adaptive evolution of the promoter region of the Sialyltransferase 8B ( STX ) gene2015

    • Author(s)
      Naoko Fujito, Toshiyuki Hayakawa, Masaya Hane, Ken Kitajima, Chihiro Sato, Yoko Satta
    • Organizer
      SMBE2015
    • Place of Presentation
      Viena, Austria
    • Year and Date
      2015-07-12
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] シアル酸転移酵素STXのプロモーター多型の進化と環境適応2014

    • Author(s)
      藤戸尚子、早川敏之、羽根正弥、北島健、佐藤ちひろ、颯田葉子
    • Organizer
      日本遺伝学会第86回大会
    • Place of Presentation
      長浜バイオ大学 (滋賀県)
    • Year and Date
      2014-09-17 – 2014-09-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] 脳におけるヒト特異的なSiglecペア型受容体の出現2014

    • Author(s)
      早川敏之、安形高志
    • Organizer
      日本遺伝学会第86回大会
    • Place of Presentation
      長浜バイオ大学 (滋賀県)
    • Year and Date
      2014-09-17 – 2014-09-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] ヒト系統におけるシアル酸転移酵素ST8SiaIIの発現多型の進化2014

    • Author(s)
      早川敏之、藤戸尚子、羽根正弥、北島健、佐藤ちひろ、颯田葉子
    • Organizer
      日本進化学会第16回大阪大会
    • Place of Presentation
      高槻現代劇場(大阪府)
    • Year and Date
      2014-08-17 – 2014-08-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] Human-specific changes in sialic acid biology.2014

    • Author(s)
      Toshiyuki Hayakawa
    • Organizer
      International Symposium "MHC evolution and human evolution”
    • Place of Presentation
      総合研究大学院大学(神奈川県)
    • Year and Date
      2014-07-26 – 2014-07-27
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 「生物システムの進化と環境変化:ヒトのゲノムに刻まれた環境の変化への適応を読み解く」

    • Author(s)
      藤戸尚子、早川敏之、颯田葉子
    • Organizer
      人類若手の会『第1回集団遺伝学・分子進化学に関する研究会』
    • Place of Presentation
      北里大学医学部(相模原)
    • Related Report
      2013 Annual Research Report
    • Invited

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Published: 2013-05-21   Modified: 2019-07-29  

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