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Adaptive Evolution of Plants to Ultra-basic Soil: Comparative Genomic Analysis in Aster savatieri

Research Project

Project/Area Number 25291085
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Biodiversity/Systematics
Research InstitutionThe University of Tokyo

Principal Investigator

ITO Motomi  東京大学, 大学院総合文化研究科, 教授 (00193524)

Co-Investigator(Kenkyū-buntansha) 阪口 翔太  京都大学, 人間・環境学研究科(研究院), 助教 (50726809)
土松 隆志  千葉大学, 理学(系)研究科(研究院), 准教授 (60740107)
青木 誠志郎  東京大学, 総合文化研究科, 学術研究員 (10334301)
森長 真一  東京大学, 総合文化研究科, 助教 (80568262)
Research Collaborator ISHIKAWA Naoko  
Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥17,810,000 (Direct Cost: ¥13,700,000、Indirect Cost: ¥4,110,000)
Fiscal Year 2015: ¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2014: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2013: ¥7,670,000 (Direct Cost: ¥5,900,000、Indirect Cost: ¥1,770,000)
Keywords適応進化 / 比較ゲノム / ミヤマヨメナ / シュンジュギク / 蛇紋岩 / 種分化
Outline of Final Research Achievements

In this study, we analyzed the genetic background of evolution and the molecular mechanism for serpentinous soil adaptation of Aster savatieri.
Population structure analysis by SSR was performed on 38 populations including Aster savatieri and var. pygmaeus. As a result, it became clear that the whole is divided into three groups with geographical cohesion. Moreover, it was suggested that var. pygmaeus evolved independently at least twice in Aichi and Mie / Kochi. In addition, as a result of reference preparation with RNA-seq, polymorphism detection, and comparison of gene expression profiles, FRD 3 was searched for as a result of searching for genes with GO related to heavy metal tolerance.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (9 results)

All 2017 2016 2015 2014

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 2 results,  Acknowledgement Compliant: 1 results) Presentation (6 results)

  • [Journal Article] Development and characterization of SSR marker for Aster savatieri (Asteraceae)2016

    • Author(s)
      Ishikawa, N., Sakaguchi, S.,Ito, M.
    • Journal Title

      Applications in Plant Sciences

      Volume: 4

    • NAID

      120006346267

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Development and Characterization of EST-SSR Markers for the Solidago virgaurea Complex (Asteraceae) in the Japanese Archipelago.2014

    • Author(s)
      Sakaguchi, S. and Ito, M.
    • Journal Title

      Applications in Plant Sciences

      Volume: 2 Issue: 7 Pages: 1400035-1400035

    • DOI

      10.3732/apps.1400035

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Variation in floral morphology within a population of Aster hispidus var. tubulosus (Asteraceae, Astereae).2014

    • Author(s)
      Nakagawa, S. and Ito, M.
    • Journal Title

      Plant Species Biol.

      Volume: - Issue: 3 Pages: 287-293

    • DOI

      10.1111/1442-1984.12027

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] ミヤマヨメナにおける矮性型進化と土壌適応に関する遺伝子発現解析2017

    • Author(s)
      石川直子・阪口翔太・横山政昭・福島慶太郎・伊藤元己
    • Organizer
      日本生態学会第64回大会
    • Place of Presentation
      早稲田大学(東京都新宿区)
    • Year and Date
      2017-03-14
    • Related Report
      2016 Annual Research Report
  • [Presentation] ゲノムワイド塩基配列多型検出のためのMIG-seq法試料として、さく葉標本から抽出したDNAは使用可能か?2017

    • Author(s)
      伊藤元己・加藤俊英・森重剛志・上原浩一・海老原淳・綱本良啓・満行知花・陶山佳久
    • Organizer
      日本植物分類学会第16回大会
    • Place of Presentation
      京都大学(京都府京都市左京区)
    • Year and Date
      2017-03-10
    • Related Report
      2016 Annual Research Report
  • [Presentation] キク科蛇紋岩植物のトランスクリプトーム解析2016

    • Author(s)
      石川直子, 西尾紗恵, 横山政昭, 阪口翔太, 永野惇, 本庄三恵, 工藤洋, 伊藤元己
    • Organizer
      日本生態学会
    • Place of Presentation
      仙台国際センター(仙台市青葉区)
    • Year and Date
      2016-03-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] 蛇紋岩植物シュンジュギクの土壌適応2016

    • Author(s)
      石川直子, 阪口翔太, 横山政昭, 福島慶太郎,伊藤元己
    • Organizer
      日本植物分類学会
    • Place of Presentation
      富山大学(富山市)
    • Year and Date
      2016-03-06
    • Related Report
      2015 Annual Research Report
  • [Presentation] 蛇紋岩植物シュンジュギクの遺伝構造解析 ー蛇紋岩土壌適応形質の進化について2015

    • Author(s)
      石川直子、森下洋子、阪口翔太、伊藤元己
    • Organizer
      日本生態学会
    • Place of Presentation
      鹿児島大学( 鹿児島県鹿児島市)
    • Year and Date
      2015-03-18 – 2015-03-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] 蛇紋岩植物の進化ーシュンジュギクとミヤマヨメナの遺伝構造解析2015

    • Author(s)
      石川直子、森下洋子、阪口翔太、伊藤元己
    • Organizer
      日本植物分類学会
    • Place of Presentation
      福島大学( 福島県福島市)
    • Year and Date
      2015-03-06 – 2015-03-08
    • Related Report
      2014 Annual Research Report

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Published: 2013-05-21   Modified: 2019-07-29  

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