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Evolution of laminarialean kelp beds deduced from the genomics and morphological features

Research Project

Project/Area Number 25291087
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Biodiversity/Systematics
Research InstitutionKobe University

Principal Investigator

Kawai Hiroshi  神戸大学, 内海域環境教育研究センター, 教授 (30161269)

Co-Investigator(Kenkyū-buntansha) HANYUDA TAKEAKI  神戸大学, 自然科学系先端融合研究環内海域環境教育研究センター, 助教 (40379334)
YAMAGISHI TAKAHIRO  神戸大学, 自然科学系先端融合研究環, 助教 (30379333)
NAGASATO CHIKAKO  北海道大学, 北方生物圏フィールド科学センター, 准教授 (00374710)
本村 泰三  北海道大学, 学内共同利用施設等, 教授 (30183974)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥17,940,000 (Direct Cost: ¥13,800,000、Indirect Cost: ¥4,140,000)
Fiscal Year 2015: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2014: ¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Fiscal Year 2013: ¥7,540,000 (Direct Cost: ¥5,800,000、Indirect Cost: ¥1,740,000)
Keywordsコンブ目 / 進化 / 分子系統 / トランスクリプトーム / 褐藻 / 網羅的cDNA塩基配列解析 / 生物地理 / 藻場構成種 / 網羅的cDNA塩基配列解析
Outline of Final Research Achievements

The molecular phylogeny of derived Laminariales using 6 chloroplast and 6 mitochondrial gene sequences revealed that Alariaceae and Agaraceae/Laminariaceae diverged from Aureophycaceae and the Agaraceae branched. This suggested that the formation of mucilaginous organs and pneumatocysts occurred in the relatively early stage of the evolution of derived Laminariales, and the adaptation to temperate habitat from cold-water habitat, and dispersal to the Southern Hemisphere occurred several time independently in different lineages in laminarialean families. Transcroptome analyses suggested that the diversification of mannurate c5 epimarase and metaroprotease played important roles in the anatomical differenciation of derived Laminariales.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (47 results)

All 2016 2015 2014 2013

All Journal Article (30 results) (of which Int'l Joint Research: 7 results,  Peer Reviewed: 30 results,  Open Access: 7 results,  Acknowledgement Compliant: 2 results) Presentation (13 results) (of which Int'l Joint Research: 2 results,  Invited: 2 results) Book (4 results)

  • [Journal Article] Phylogeographic analysis of the brown alga Cutleria multifida (Tilopteridales, Phaeophyceae) suggests a complicated introduction history2016

    • Author(s)
      Kawai H., Kogishi K., Hanyuda T., Arai S., Gurgel C.F., Nelson W., Meinesz A., Tsiamis K. and Peters A.F.
    • Journal Title

      Phycological Research

      Volume: 64 Issue: 1 Pages: 3-10

    • DOI

      10.1111/pre.12113

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Taxonomic revision of Papenfussiella species (Chordariaceae, Phaeophyceae) in the Northern Hemisphere2016

    • Author(s)
      Kawai, H., Miyoshi, K., Hanyuda, T.
    • Journal Title

      Phycologia

      Volume: 55 Issue: 3 Pages: 308-317

    • DOI

      10.2216/15-139.1

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Flagellar waveforms of gametes in the brown alga Ectocarpus siliculosus.2016

    • Author(s)
      Kinoshita N, Shiba K, Inaba K, Fu G, Nagasato C and Motomura T.
    • Journal Title

      European Journal of Phycology

      Volume: 51 Issue: 2 Pages: 139-148

    • DOI

      10.1080/09670262.2015.1109144

    • NAID

      120006220013

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] An introduced population of Chorda asiatica (Chordaceae, Laminariales) in Puget Sound, North America2015

    • Author(s)
      Kawai H., Hanyuda T., Mumford T. and Waaland J.R.
    • Journal Title

      Phycological Research

      Volume: 63 Issue: 2 Pages: 154-158

    • DOI

      10.1111/pre.12089

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Taxonomy, morphology and genetic variation of Nitella flexilis var. bifurcata (Charales, Characeae) from Japan2015

    • Author(s)
      Sakayama, H., Kai, A, Nishiyama, M., Watanabe, M. M., Kato, S., Ito, M., Nozaki, H. and Kawai, H.
    • Journal Title

      Phycological Research

      Volume: 63 Issue: 3 Pages: 159-166

    • DOI

      10.1111/pre.12085

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Taxonomic re-examination of Japanese Halimeda species using genetic markers, and proposal of a new species Halimeda ryukyuensis (Bryopsidales, Chlorophyta)2015

    • Author(s)
      Kojima R., Hanyuda T. and Kawai H.
    • Journal Title

      Phycological Research

      Volume: 63 Issue: 3 Pages: 178-188

    • DOI

      10.1111/pre.12095

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Diversity of Halimeda (Chlorophyta) from the Thai–Malay Peninsula2015

    • Author(s)
      Pongparadon S., Zuccarello G., Phang S.-M., Kawai H., Hanyuda T. and Prathep A.
    • Journal Title

      Phycologia

      Volume: 54 Issue: 4 Pages: 349-366

    • DOI

      10.2216/14-108.1

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Reproductive morphology and DNA sequences of the brown alga Platysiphon verticillatus support the new combination Platysiphon glacialis2015

    • Author(s)
      Kawai H., Hanyuda T., Yamagishi T., Kai A., Lane C.E., McDevit D., Küpper F.C. and Saunders G.W.
    • Journal Title

      Journal of Phycology

      Volume: 51 Issue: 5 Pages: 910-917

    • DOI

      10.1111/jpy.12331

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Molecular phylogeny of two unusual brown algae, Phaeostrophion irregulare and Platysiphon glacialis, proposal of the Stschapoviales ord. nov. and Platysiphonaceae fam. nov., and a re-examination of divergence times for brown algal orders2015

    • Author(s)
      Kawai H., Hanyuda T., Draisma G.A. Wilce R.T. and Andersen R.A.
    • Journal Title

      Journal of Phycology

      Volume: 51 Issue: 5 Pages: 918-928

    • DOI

      10.1111/jpy.12332

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Aribbon-like structure in the ejective organelle of green microalga Pyramimonas parkeae (Prasinophyceae) consists of core histones and polymers containing N-acetyl-glucosamine.2015

    • Author(s)
      Yamagishi T. and Kawai H.
    • Journal Title

      Protist

      Volume: 166 Issue: 5 Pages: 522-533

    • DOI

      10.1016/j.protis.2015.08.003

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Ubiquitous distribution of helmchrome in phototactic swarmers of the stramenopiles.2015

    • Author(s)
      Fu G., Nagasato C., Yamagishi T., Kawai H., Okuda K., Yoshitake T., Horiguchi T., Motomura T.
    • Journal Title

      Protplasma

      Volume: 253 Issue: 3 Pages: 929-941

    • DOI

      10.1007/s00709-015-0857-7

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Plasmodesmata of brown algae.2015

    • Author(s)
      Terauchi, M, Nagasato, C, and Motomura, T.
    • Journal Title

      J. Plant Res.

      Volume: 128 Issue: 1 Pages: 7-15

    • DOI

      10.1007/s10265-014-0677-4

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Development and function of plasmodesmata in Fucus zygotes2015

    • Author(s)
      Nagasato, C., Tanaka, A. and Motomura, T
    • Journal Title

      Bot. Mar.

      Volume: 58 Pages: 229-238

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Phylogeographic data revealed shallow genetic structure in the kelp Saccharina japonica (Laminariales, Phaeophyta).2015

    • Author(s)
      Zhang J, Yao JT, Sun ZM, Fu G, Galanin DA, Nagasato C, Motomura T, Hu ZM and Duan DL.
    • Journal Title

      BMC Evolutionary Biology

      Volume: 15 Issue: 1 Pages: 1-12

    • DOI

      10.1186/s12862-015-0517-8

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Spermatogenesis and auxospore structure in the multipolar centric diatom Hydrosera2015

    • Author(s)
      Masahiko Idei, Shinya Sato, Chikako Nagasato, Taizo Motomura, Kensuke Toyoda, Tamotsu Nagumo, David G. Mann
    • Journal Title

      Journal of Phycology

      Volume: 51 Issue: 1 Pages: 144-158

    • DOI

      10.1111/jpy.12261

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Occurrence of an endangered species Nitellopsis obtusa (Charales, Charophyceae) in western Japan and the genetic differences within and among Japanese populations2015

    • Author(s)
      Kato, S., Kawai, H., Takimoto, M., Suga, H., Yohda, K., Horiya, K., Higuchi, S., Sakayama, H. 2015. Occurrence of an endangered species Nitellopsis obtusa (Charales, Charophyceae) in western Japan and the genetic differences within and among Japanese populations. Phycol. Res.
    • Journal Title

      Phycol. Res.

      Volume: 63 Pages: 00-00

    • NAID

      40020140316

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Taxonomy, morphology and genetic variation of Nitella flexilis var. bifurcata (Charales, Characeae) from Japan2015

    • Author(s)
      Sakayama, H., Kai, A., Nishiyama, M., Watanabe, M.M., Kato, S., Ito, M., Nozaki, H., Kawai, H.
    • Journal Title

      Phycol. Res.

      Volume: 63 Pages: 00-00

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Taxonomic re-examination of Japanese Halimeda species using genetic markers, and proposal of a new species Halimeda ryukyuensis (Bryopsidales, Chlorophyta)2015

    • Author(s)
      Kojima, R., Hanyuda, T., Kawai, H.
    • Journal Title

      Phycol. Res.

      Volume: 63 Pages: 00-00

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ligulate Desmarestia (Desmarestiales, Phaeophyceae) revised: D. japonica sp. nov. and D. dudresnayi differ from D. ligulata.2014

    • Author(s)
      Yang, E.C., Peters, A.F., Kawai, H., Stern, R., Hanyuda, T., Bárbara, T., Müller, D.G., Srittmatter, M. Prud’Homme van Reine, W.F., Küpper, F.C.
    • Journal Title

      J. Phycol.

      Volume: 50 Issue: 1 Pages: 149-166

    • DOI

      10.1111/jpy.12148

    • Related Report
      2014 Annual Research Report 2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Radioactive cesium accumulation in seaweeds by the Fukushima 1 Nuclear Power Plant accident – two years’ monitoring at Iwaki and its vicinity.2014

    • Author(s)
      Kawai, H., Kitamura, A., Mimura, M., Mimura, T., Tahara, T., Aida, D., Sato, K., H. Sasaki.
    • Journal Title

      J. Plant Res.

      Volume: 127 Issue: 1 Pages: 23-42

    • DOI

      10.1007/s10265-013-0603-1

    • Related Report
      2014 Annual Research Report 2013 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Four newly recorded species of the calcified marine brown macroalgal genus Padina (Dictyotales, Phaeophyceae) for Australia2014

    • Author(s)
      Ni-Ni-Win, Zhong-Min Sun, Z.-M., Hanyuda, T., Kurihara, A., Gurgel, C.F.D., Kawai, H.
    • Journal Title

      Aust. Syst. Bot.

      Volume: 26 Issue: 6 Pages: 448-465

    • DOI

      10.1071/sb13025

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Recent advances in the phylogeny and taxonomy of Laminariales2014

    • Author(s)
      Kawai, H.
    • Journal Title

      Perspectives in Phycology

      Volume: 1 Pages: 27-40

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Comparative transcriptome analysis of Discosporangium mesarthrocarpum (Phaeophyceae), Schizocladia ischiensis (Schizocladiophyceae) and Phaeothamnion confervicola (Phaeothamniophyceae), with special reference to cell wall-related genes2014

    • Author(s)
      Yamagishi, T., Müller, D.G., Kawai, H.
    • Journal Title

      J. Phycol.

      Volume: 50 Pages: 543-551

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] A pilot-scale floating closed culture system for the multicellular cyanobacterium Arthrospira platensis NIES-032014

    • Author(s)
      Toyoshima, M., Yamagishi, T., Aikawa, S., Kondo, A., Kawai, H.
    • Journal Title

      J. Appl. Phycol.

      Volume: 27 Issue: 6 Pages: 0-0

    • DOI

      10.1007/s10811-014-0484-2

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Proteomics analysis of heterogeneous flagella in brown alga (Stramenopiles)2014

    • Author(s)
      Fu, G., Nagasato, C., Oka, S., Cock, M. J. and Motomura, T.
    • Journal Title

      Protist

      Volume: 165 Issue: 5 Pages: 662-675

    • DOI

      10.1016/j.protis.2014.07.007

    • NAID

      120005906760

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of three proteins involved in fertilization and parthenogenetic development of a brown alga, Scytosiphon lomentaria2014

    • Author(s)
      Jong Won Han, J. W., Tatyana A. Klochkova, T. A, Shim, J., Nagasato, C. Motomura, T., and Kim, G. H.
    • Journal Title

      Planta

      Volume: 240 Issue: 6 Pages: 1253-1267

    • DOI

      10.1007/s00425-014-2148-5

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mesospora elongata sp. nov. (Ralfsiales, Phaeophyceae), a new crustose brown algal species from the Indo-Pacific region2013

    • Author(s)
      Poong, S.-W., Lim P.-E., Phang, S.-M., Gerung G., Kawai, H.
    • Journal Title

      Phycologia

      Volume: 52 Issue: 1 Pages: 84-81

    • DOI

      10.2216/12-42.1

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A molecular-assisted floristic survey of crustose brown algae (Phaeophyceae) from Malaysia and Lombok Island, Indonesia based on rbcL and partial cox1 genes2013

    • Author(s)
      Poong, S.-W., Lim P.-E., Phang, S.-M., Sunarpi, H., West, J.A., Kawai, H.
    • Journal Title

      J. Appl. Phycol.

      Volume: 26 Issue: 2 Pages: 1231-1242

    • DOI

      10.1007/s10811-013-0081-9

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Direct conversion of Spirulina to ethanol without pretreatment of enzymatic hydrolysis processes2013

    • Author(s)
      Aikawa, S., Joseph, A., Yamada, R., Izumi, Y., Yamagishi, T., Matsuda, F., Kawai, H., Chang, J-S., Hasunuma, T., Kondo, A.
    • Journal Title

      Energy Environ. Sci.

      Volume: 6 Pages: 1844-1849

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ancestral reproductive structure in basal kelp Aureophycus aleuticus2013

    • Author(s)
      Kawai, H., Hanyuda, T., Ridgway, L.M., Holser, K.
    • Journal Title

      Sci. Rep.

      Volume: 3 Issue: 1 Pages: 2491-2491

    • DOI

      10.1038/srep02491

    • NAID

      120005356886

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] Marine algae carried across the North Pacific on Japanese Tsunami Marine Debris (JTMD) and their invation threat to the coasts of Oregon and Washington, USA2016

    • Author(s)
      Hansen, G., Hanyuda, T., Kawai, H.
    • Organizer
      9th International Conference on Marine Bioinvasions
    • Place of Presentation
      The Menzies Sydney Hotel, Sydney
    • Year and Date
      2016-01-19
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Taxonomic revision of Papenfussiella species in the Northern Hemispher2015

    • Author(s)
      Kawai, H., Miyoshi, K., Hanyuda, T.
    • Organizer
      European Phycological Congress
    • Place of Presentation
      Novotel, London
    • Year and Date
      2015-08-23
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 北米産ツルモ属の系統地理–新たに確認された越境移入–2015

    • Author(s)
      川井浩史・羽生田岳昭・T. Mumford・J.R. Waaland
    • Organizer
      日本藻類学会第39回大会
    • Place of Presentation
      九州大学
    • Year and Date
      2015-03-21 – 2015-03-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] プラシノ藻Pyramimonas parkeaeにおけるエジェクトソーム様構造の分子同定:ヒストンと酸性多糖の重合体から成る新奇ポリマー2015

    • Author(s)
      山岸隆博・川井浩史
    • Organizer
      日本藻類学会第39回大会
    • Place of Presentation
      九州大学
    • Year and Date
      2015-03-21 – 2015-03-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] Genomic study of the brown algal model organism Ectocarpus2014

    • Author(s)
      Kawai, H.
    • Organizer
      Marchantia Workshop 2014
    • Place of Presentation
      Centennial Hall, Kobe University, Kobe
    • Year and Date
      2014-12-08 – 2014-12-10
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Molecular phylogeny of Cladosiphon species, and proposal of a new species from central Japan2014

    • Author(s)
      Kawai, H., Kim, S.H., Ichikawa, Y., Uwai, S. Hanyuda, T., Peters, A.F.
    • Organizer
      7th Asian Pacific Phycological Forum
    • Place of Presentation
      Wuhan Eastlake International Conference Center, Wuhan, China
    • Year and Date
      2014-09-20 – 2014-09-24
    • Related Report
      2014 Annual Research Report
  • [Presentation] 褐藻の細胞壁形成における金標識抗フコイダン抗体の分布2014

    • Author(s)
      関田論子・川井浩史・奥田一雄
    • Organizer
      日本植物学会第78回大会
    • Place of Presentation
      明治大学生田キャンパス
    • Year and Date
      2014-09-12 – 2014-09-14
    • Related Report
      2014 Annual Research Report
  • [Presentation] Early evolution of Laminariales2014

    • Author(s)
      Kawai, H.
    • Organizer
      28th Congress of the Phycological Society of Southern Africa
    • Place of Presentation
      Melkbosstrand, South Africa
    • Related Report
      2013 Annual Research Report
  • [Presentation] 系統保存株を用いた褐藻類の多遺伝子分子系統解析とPlatysiphon verticillatusの分類の再検討2014

    • Author(s)
      川井浩史・羽生田岳昭・R.J. Andersen・R. Wilce
    • Organizer
      日本藻類学会第38回大会
    • Place of Presentation
      東邦大学
    • Related Report
      2013 Annual Research Report
  • [Presentation] Life history, molecular phylogeny and taxonomic revision of Platysiphon verticillatus (Phaeophyceae)2013

    • Author(s)
      awai, H., Hanyuda, T., Kai, A., Yamagishi, T., Saunders, G.W., Lane, C., McDevit, D., Küpper, F.C., Wilce, R.T.
    • Organizer
      52nd Northeast Algal Society Annual Symposium
    • Place of Presentation
      Mystic, Connecticut, USA
    • Related Report
      2013 Annual Research Report
  • [Presentation] Sorus formation of the basal system in Aureophycus aleuticus, and its taxonomic revision at familial rank2013

    • Author(s)
      Kawai, H., Hanyuda, T., Holser, K., Ridgeway, L.M.
    • Organizer
      10th International Phycological Congress
    • Place of Presentation
      Orlando, Florida, USA
    • Related Report
      2013 Annual Research Report
  • [Presentation] Macroalgal culture collection in Kobe University and macroalgal genomics2013

    • Author(s)
      Kawai, H., Yamagishi, T., Kai, A., Yamaguchi, A., Hanyuda, T.
    • Organizer
      5th ANRRC International Meeting
    • Place of Presentation
      Shonan-village Center, Hayama, Japan
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 褐藻類の多細胞化・大型化を細胞壁成分、有性生殖様式、生活史型の進化から考える2013

    • Author(s)
      川井浩史・羽生田岳昭・山岸隆博
    • Organizer
      日本植物学会第77回大会
    • Place of Presentation
      北海道大学
    • Related Report
      2013 Annual Research Report
  • [Book] ‘Evolution and biogeography of laminarialean kelps’ (Ed. Z. Hu and C. Fraser) in ‘Seaweed Phylogeography’2016

    • Author(s)
      Kawai, H., Hanyuda, T., Uwai, S.
    • Total Pages
      22
    • Publisher
      Springer
    • Related Report
      2015 Annual Research Report
  • [Book] ‘Introduction (Heterokontobionta p.p.), Cryptophyta, Dinophyta, Haptophyta, Heterkontophyta (except diatoms, Phaeophyceae, Eustigmatophyceae), Chlorarachniophyta, Euglenophyta’ (Ed. W. Frey) in ‘Syllabus of Plant Families – A. Engler’s Syllabus der Pflanzenfamilien Part 2/1 Photoautotrophic eukaryotic Algae2015

    • Author(s)
      Nakayama, T., Kawai, H.
    • Total Pages
      30
    • Publisher
      Borntraeger Verlagsbuchhandlung
    • Related Report
      2015 Annual Research Report
  • [Book] Syllabus of Plant Families Part 2/12015

    • Author(s)
      Nakayama, T., Kawai, H.
    • Total Pages
      324
    • Publisher
      Borntraeger
    • Related Report
      2014 Annual Research Report
  • [Book] 光合成生物の進化と生命科学2014

    • Author(s)
      三村徹郎・川井浩史
    • Total Pages
      194
    • Publisher
      培風館
    • Related Report
      2014 Annual Research Report

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Published: 2013-05-21   Modified: 2019-07-29  

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