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Identification of genes controlling astringency in Chinese-type PCNA (pollination constant non-astringent) and its application to breeding for PCNA-type persimmon

Research Project

Project/Area Number 25292020
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Horticultural science
Research InstitutionRyukoku University (2016)
Kyoto University (2013-2015)

Principal Investigator

Yonemori Keizo  龍谷大学, 農学部, 教授 (10111949)

Co-Investigator(Kenkyū-buntansha) 神崎 真哉  近畿大学, 農学部, 准教授 (20330243)
佐藤 明彦  国立研究開発法人農業・食品産業技術総合研究機構, 果樹研究所, 上席研究員 (30355440)
山根 久代  京都大学, (連合)農学研究科(研究院), 講師 (80335306)
Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥19,110,000 (Direct Cost: ¥14,700,000、Indirect Cost: ¥4,410,000)
Fiscal Year 2015: ¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2014: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2013: ¥9,490,000 (Direct Cost: ¥7,300,000、Indirect Cost: ¥2,190,000)
Keywords園芸学 / 果樹 / 甘渋性 / タンニン / 植物 / ゲノム
Outline of Final Research Achievements

The accuracy of AFLP markers linked to the locus of natural astringency-loss in Chinese-type PCNA persimmon were confirmed and then, the markers were used as probes for fosmid/BAC library constructed from Diospyros lotus, which is a close diploid relative of D. kaki, for constructing contig to identify the locus of natural astringency-loss. However, the results showed that the fosmid/BAC library is hard to use directly for identifying the locus probably due to the difference of genome structure between D. kaki and D. lotus. On the other hand, RNA-seq analysis using segregated progeny between Chinese-type PCNA and non-PCNA indicated that the genes related to transportation in the cell were differently expressed among them, as well as the genes related to flavonoid biosynthesis pathway.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (5 results)

All 2017 2016 2014

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (4 results) (of which Int'l Joint Research: 3 results)

  • [Journal Article] Application of marker-assisted selection in persimmon breeding of PCNA offspring using SCAR markers among the population from the cross between non-PCNA 'Taigetsu' and PCNA 'Kanshu'2014

    • Author(s)
      Mitani, N., A. Kono, M. Yamada, A. Sato, S. Kobayashi, Y. Ban, T. Ueno, M. Shiraishi, S. Kanzaki, T. Tsujimoto, K. Yonemori
    • Journal Title

      HortScience

      Volume: 49 Pages: 1132-1135

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Presentation] Toward Isolation of a Gene Conferring Astringency Loss in Persimmon Fruit2017

    • Author(s)
      Nishiyama, S., N. Onoue, A. Kono, A. Sato2, K. Yonemori and R. Tao
    • Organizer
      PLANT AND ANIMAL GENOME XXIV
    • Place of Presentation
      San Diego, California, USA
    • Year and Date
      2017-01-14
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Differential expression analysis of the genes conferring non-astringent trait at the two different loci in Japanese- and Chinese-type pollination constant non-astringent (PCNA) persimmon2016

    • Author(s)
      Yonemori, K., S. Nishiyama, A. Kono, N. Onoue and A. Sato
    • Organizer
      VI International Symposium on Persimmon
    • Place of Presentation
      VALENCIA, SPAIN
    • Year and Date
      2016-10-17
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] カキ甘渋性に関するトランスクリプトーム解析2016

    • Author(s)
      西山総一郎・尾上典之・河野 淳・佐藤明彦・米森敬三・田尾龍太郎
    • Organizer
      園芸学会平成28年度秋季大会
    • Place of Presentation
      名城大学天白キャンパス
    • Year and Date
      2016-09-10
    • Related Report
      2016 Annual Research Report
  • [Presentation] Comparative genomics of the locus controlling astringency in Diospyros species2016

    • Author(s)
      Nishiyama, S., A. Kono, N. Onoue, A. Sato, K. Ushijima, H. Yamane, R. Tao and K. Yonemori
    • Organizer
      Plant and Animal Genome XXIV
    • Place of Presentation
      San Diego, California, USA
    • Year and Date
      2016-01-09
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research

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Published: 2013-05-21   Modified: 2019-07-29  

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