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Analysis of functional SNP in lettuce DREB gene in relation to environmental stress tolerance.

Research Project

Project/Area Number 25292022
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Horticultural science
Research InstitutionKobe University

Principal Investigator

Uno Yuichi  神戸大学, (連合)農学研究科(研究院), 准教授 (90304120)

Research Collaborator SEKI KOUSUKE  長野県野菜花き試験場, 育種部, 野菜担当
Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥18,850,000 (Direct Cost: ¥14,500,000、Indirect Cost: ¥4,350,000)
Fiscal Year 2016: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2015: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2014: ¥3,380,000 (Direct Cost: ¥2,600,000、Indirect Cost: ¥780,000)
Fiscal Year 2013: ¥8,190,000 (Direct Cost: ¥6,300,000、Indirect Cost: ¥1,890,000)
Keywords環境ストレス / 転写因子 / 耐性 / レタス / 耐塩性 / ストレス / 園芸学
Outline of Final Research Achievements

DREB1A encoding the transcription factor that improves abiotic stress tolerance of plants. There are many DREB1A gene orthologs in various plant species. However, in lettuce (Lactuca sativa L.), single nucleotide polymorphism (SNP) is exist at 70th tryptophane to stop codon. In this study, the relationship between the SNP and stress tolerance was verified by investigating overexpressed transformants and F2 generations.
Under freezing, drought and salt stress condition, transgenic lettuce overexpressing LsDREB1A-X70W lines showed the higher survival rate. This phenomenon was supported by stress-related target genes revealed by RNA-seq analysis. Both X70W-genotype and heterozygous F2 showed a significant higher survival rate as compared to W70X-genotype. These results suggest that the SNP of LsDREB1A is utilized as DNA marker in environmental stress tolerance of lettuce, and the cultivars possessing wild-type genotype X70W could be used as a useful breeding material.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (9 results)

All 2017 2016 2014 2013

All Journal Article (3 results) (of which Peer Reviewed: 2 results,  Acknowledgement Compliant: 1 results) Presentation (6 results) (of which Invited: 2 results)

  • [Journal Article] Reduction of leaf lettuce tipburn using an indicator cultivar.2016

    • Author(s)
      Yuichi Uno, Hiroshi Okubo, Hiromichi Itoh, and Ryohei Koyama
    • Journal Title

      Scientia Horticulturae

      Volume: 210 Pages: 14-18

    • DOI

      10.1016/j.scienta.2016.07.001

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Functional characterization and expression profiling of a DREB2-type gene from lettuce (Lactuca sativa L.).2014

    • Author(s)
      Keita Kudo, Takeru Oi and Yuichi Uno
    • Journal Title

      Plant Cell, Tissue and Organ Culture

      Volume: 116 Issue: 1 Pages: 97-109

    • DOI

      10.1007/s11240-013-0386-z

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Isolation and characterization of DREB/CBF gene orthologs in lettuce2013

    • Author(s)
      Yuichi Uno, Keita, Kudo, Itsumi Sugimoto, and Nobushige Yonezawa
    • Journal Title

      HortScience

      Volume: 48

    • Related Report
      2013 Annual Research Report
  • [Presentation] レタスDREB1オルソログ遺伝子の過剰発現体の解析2017

    • Author(s)
      宇野 雄一, 山田 晃紀, 関 功介
    • Organizer
      園芸学会平成29年度春季大会
    • Place of Presentation
      日本大学(藤沢)
    • Year and Date
      2017-03-19
    • Related Report
      2016 Annual Research Report
  • [Presentation] レタスのDREB1オルソログ遺伝子の機能解析2016

    • Author(s)
      宇野 雄一, 山田 晃紀, 村岡 文香, 関 功介
    • Organizer
      園芸学会平成28年度秋季大会
    • Place of Presentation
      名城大学(名古屋)
    • Year and Date
      2016-09-10
    • Related Report
      2016 Annual Research Report
  • [Presentation] ストレス耐性レタスの分子育種2016

    • Author(s)
      宇野雄一
    • Organizer
      レタス研究会
    • Place of Presentation
      長野県野菜花き試験場(長野県・塩尻市)
    • Year and Date
      2016-02-19
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] ストレス耐性レタスの作出に向けて2014

    • Author(s)
      宇野雄一
    • Organizer
      農研機構 九州沖縄農業研究センター セミナー
    • Place of Presentation
      九州沖縄農業研究センター
    • Year and Date
      2014-09-29
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] レタスのDREB1オルソログ遺伝子の解析2014

    • Author(s)
      宇野雄一、米澤伸茂
    • Organizer
      園芸学会 平成26年度秋期大会
    • Place of Presentation
      佐賀大学
    • Year and Date
      2014-09-28
    • Related Report
      2014 Annual Research Report
  • [Presentation] Isolation and characterization of DREB/CBF gene orthologs in lettuce2013

    • Author(s)
      Yuichi Uno, Keita, Kudo, Itsumi Sugimoto, and Nobushige Yonezawa
    • Organizer
      American Society for Horticultural Science
    • Place of Presentation
      Palm Desert (California, USA)
    • Related Report
      2013 Annual Research Report

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Published: 2013-05-21   Modified: 2019-07-29  

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