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Study for gene expression control mechanism involved in the soil environment adaptation strategies of actinomycetes

Research Project

Project/Area Number 25292040
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Plant nutrition/Soil science
Research InstitutionNational Institute for Agro-Environmental Sciences

Principal Investigator

FUJII Takeshi  国立研究開発法人 農業環境技術研究所, その他部局等, 領域長 (00354100)

Co-Investigator(Kenkyū-buntansha) SAITO Akihiro  静岡理工科大学, 理工学部, 准教授 (50375614)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥17,160,000 (Direct Cost: ¥13,200,000、Indirect Cost: ¥3,960,000)
Fiscal Year 2015: ¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2014: ¥5,850,000 (Direct Cost: ¥4,500,000、Indirect Cost: ¥1,350,000)
Fiscal Year 2013: ¥6,370,000 (Direct Cost: ¥4,900,000、Indirect Cost: ¥1,470,000)
Keywords遺伝子発現制御 / 転写カスケード / キチナーゼ / 抗生物質生産 / 放線菌 / 転写因子
Outline of Final Research Achievements

In Streptomyces coelicolor growing in soil amended with chitin, a transcription factor DasR is involved in the regulation of expression of chitin metabolism-related genes and antibiotic production genes. In this study, in order to clarify the metabolic regulation cascade around the DasR, we tried to find factors which regulate dasR expression. As a result, we found that DasR itself binds strongly to dasR promoter, also that a transcription factor whose deletion leads to over production of chitinase and loss of catabolite repression of chitinase production controls expression of dasR.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (16 results)

All 2015 2014 2013 Other

All Journal Article (5 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 2 results,  Acknowledgement Compliant: 1 results) Presentation (8 results) (of which Invited: 2 results) Remarks (2 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Uptake of chitosan-derived D-glucosamine oligosaccharides in Streptomyces coelicolor A3(2)2015

    • Author(s)
      Viens P, Dubeau MP, Kimura A, Desaki Y, Shinya T, Shibuya N, Saito A,Brzezinski R.
    • Journal Title

      FEMS Microbiol Lett

      Volume: 362 Issue: 9 Pages: 9-9

    • DOI

      10.1093/femsle/fnv048

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Chitosan degradation and associated changes in bacterial community structures in two contrasting soils2015

    • Author(s)
      Ami Sawaguchi, Shouta Ono, Masaru Oomura, Kaori Inami, Yuta Kumeta, Kazuma Honda, Reiko Sameshima-Saito, Kazunori Sakamoto, Akikazu Ando, Akihiro Saito
    • Journal Title

      Soil Science and Plant Nutrition

      Volume: 61 Issue: 3 Pages: 471-480

    • DOI

      10.1080/00380768.2014.1003965

    • NAID

      110010031455

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] 土壌からのRNAの抽出技術とその利用技術の開発2013

    • Author(s)
      藤井毅、王勇
    • Journal Title

      農林水産省研究成果「土壌微生物相の解明による土壌生物性の解析技術の開発(eDNAプロジェクト)」

      Volume: 494 Pages: 25-28

    • Related Report
      2013 Annual Research Report
  • [Journal Article] これまで困難だった黒ボク土壌からのRNA抽出法の開発2013

    • Author(s)
      王勇、長岡一成、早津雅仁、酒井順子、多胡香奈子、藤井毅
    • Journal Title

      農業環境技術研究所 研究成果情報

      Volume: 29 Pages: 36-37

    • Related Report
      2013 Annual Research Report
  • [Journal Article] 土壌環境下、放線菌の抗生物質生産遺伝子群の発現がキチンによって誘導される2013

    • Author(s)
      ナザリベナム、藤井毅
    • Journal Title

      農業環境技術研究所 研究成果情報

      Volume: 29 Pages: 38-39

    • Related Report
      2013 Annual Research Report
  • [Presentation] Uptake of a chitin-degradation product via the constitutive N-acetylglucosamine/N,N’-diacetylchitobiose binding protein NgcESCO of an ABC transporter in Streptomyces coelicolor A3(2)2015

    • Author(s)
      Akihiro Saito, Chibaru Iinuma, Takayuki Ohnuma, Tomonori Shinya, Yusuke Kimura, Yuzusa Aoki, Liu Feng, Yoshitake Desaki, Naoto Shibuya, Tamo Fukamizo, Akikazu Ando, Takeshi Fujii, Kiyotaka Miyashita
    • Organizer
      日本微生物生態学会
    • Place of Presentation
      土浦亀城プラザ
    • Year and Date
      2015-10-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] キチン添加が畑土壌のキチン分解関連酵素と微生物に及ぼす影響 ‐キチン添加90日後までの影響2015

    • Author(s)
      井浪かおり、粂田佑太、鮫島(齋藤)玲子、齋藤明広
    • Organizer
      日本土壌肥料学会
    • Place of Presentation
      京都大学
    • Year and Date
      2015-09-10
    • Related Report
      2015 Annual Research Report
  • [Presentation] Streptomyces属放線菌のキチン分解物トランスポーター2015

    • Author(s)
      齋藤明広
    • Organizer
      日本キチン・キトサン学会
    • Place of Presentation
      東海大学熊本キャンパス
    • Year and Date
      2015-08-21
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 畑土壌でのキチン分解とそれに伴う微生物群集構造と酵素活性の変化2015

    • Author(s)
      井浪かおり、小野翔太、粂田佑太、榑松愛理、大塚恵巳、鮫島(齋藤)玲子、齋藤明広
    • Organizer
      日本キチン・キトサン学会
    • Place of Presentation
      東海大学熊本キャンパス
    • Year and Date
      2015-08-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] MH-K1キトサナーゼの構造と反応機構2015

    • Author(s)
      鈴木道彦、齋藤明広、小林麻理子、横山知史、大宮祥子、栗剣、杉田慶、三木邦夫、齋藤純一、安藤昭一
    • Organizer
      日本キチン・キトサン学会
    • Place of Presentation
      東海大学熊本キャンパス
    • Year and Date
      2015-08-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] ナタマメ根粒菌の分類と収穫量への影響2015

    • Author(s)
      増田航、畠中雄佑、齋藤明広
    • Organizer
      日本土壌微生物学会
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      2015-05-23
    • Related Report
      2015 Annual Research Report
  • [Presentation] 土壌環境下における放線菌キチナーゼ遺伝子群と抗生物質生産関連遺伝子群の発現誘導2014

    • Author(s)
      飯野藤樹、ナザリ ベナム、齋藤明広、王勇、藤井毅
    • Organizer
      環境微生物系学会合同大会2014
    • Place of Presentation
      浜松市 アクトシティー浜松
    • Year and Date
      2014-10-21 – 2014-10-24
    • Related Report
      2014 Annual Research Report
  • [Presentation] 土壌抽出RNAから明らかになった抗生物質生産遺伝子の土壌における誘導発現2014

    • Author(s)
      藤井毅
    • Organizer
      農業環境技術研究所30周年セミナー
    • Place of Presentation
      秋葉原コンベンションホール
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Remarks] 土壌環境下、放線菌の抗生物質生産遺伝子群の発現がキチンによって誘導される

    • URL

      http://www.niaes.affrc.go.jp/sinfo/result/result29/result29_38.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] これまで困難だった黒ボク土壌からのRNA抽出法の開発

    • URL

      http://www.niaes.affrc.go.jp/sinfo/result/result29/result29_36.html

    • Related Report
      2014 Annual Research Report
  • [Patent(Industrial Property Rights)] 抗生物質生産関連遺伝子のスクリーニング方法2014

    • Inventor(s)
      藤井毅、ナザリベナム
    • Industrial Property Rights Holder
      独立行政法人農業環境技術研究所
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2014-042420
    • Filing Date
      2014-03-05
    • Related Report
      2013 Annual Research Report

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Published: 2013-05-21   Modified: 2019-07-29  

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