• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Study for mechanism of ABC transporters based on single molecular direct observations using high speed Atomic Force Microscopy.

Research Project

Project/Area Number 25293049
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field General physiology
Research InstitutionKeio University

Principal Investigator

SOHMA Yoshiro  慶應義塾大学, 医学部, 准教授 (60268183)

Co-Investigator(Renkei-kenkyūsha) UCHIHASHI Takayuki  金沢大学, 数物科学系, 准教授 (30326300)
NISHIZAKA Takayuki  学習院大学, 理学部, 教授 (40359112)
SAKURAI Minoru  東京工業大学, バイオ研究基盤支援総合センター, 教授 (50162342)
SATO Chikara  独立行政法人産業技術総合研究所, バイオメディカル研究部門, 研究グループ長 (00357146)
Research Collaborator YAMASHITA Hayato  
YU Ying-Chun  
HWANG Tzyh-Chang  
Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥17,030,000 (Direct Cost: ¥13,100,000、Indirect Cost: ¥3,930,000)
Fiscal Year 2015: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2014: ¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2013: ¥6,890,000 (Direct Cost: ¥5,300,000、Indirect Cost: ¥1,590,000)
KeywordsABCトランスポ-タ- / ATP加水分解 / NBDドメイン / 膜輸送 / 分子間相互作用 / 抗原-抗体反応 / 原子間力顕微鏡 / 抗原抗体反応 / ABCトランスポーター
Outline of Final Research Achievements

ABC transporter superfamily is one of the biggest protein families which members play essential physiological roles in human. The members in the ABC transporter superfamily share highly-conserved Nucleotide Binding Domain (NBD) underlying their ATP-driven mechanisms. We investigated molecular mechanism of the ‘NBD engine’ in an ABC member, Cystic Fibrosis Transmembrane Regulator (CFTR) using single-molecular measuring methods including high-speed atomic force microscopy (HS-AFM).
We succeeded the first direct observation of dynamics of the intracellular complex consisting of two NBDs and regulatory (R) domain in CFTR using HS-AFM. We also obtained results in the direct observations of binding/unbinding process between AQP4 and anti-AQP4 antibody as a model of the molecule-molecule interactions. In addition, we performed several molecular physiological/pharmacological studies for disease-associated CFTR mutants.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (41 results)

All 2017 2016 2015 2014 2013 Other

All Int'l Joint Research (2 results) Journal Article (10 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 9 results,  Open Access: 2 results,  Acknowledgement Compliant: 3 results) Presentation (21 results) (of which Int'l Joint Research: 2 results,  Invited: 8 results) Book (1 results) Remarks (7 results)

  • [Int'l Joint Research] DCRC, Univ of Missouri - Columbia(米国)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] University of Missouri-Columbia(米国)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Bicarbonate-rich fluid secretion predicted by a computational model of guinea-pig pancreatic duct epithelium.2017

    • Author(s)
      Yamaguchi M, Steward MC, Smallbone K, Sohma Y, Yamamoto A, Ko SBH, Kondo T, Ishiguro H
    • Journal Title

      Journal of Physiology

      Volume: 595 Issue: 6 Pages: 1947-1972

    • DOI

      10.1113/jp273306

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Synergistic Potentiation of Cystic Fibrosis Transmembrane Conductance Regulator Gating by Two Chemically Distinct Potentiators, Ivacaftor (VX-770) and 5-Nitro-2-(3-Phenylpropylamino) Benzoate.2016

    • Author(s)
      Lin WY, Sohma Y, Hwang TC
    • Journal Title

      Molecular Pharmacology

      Volume: 90 Issue: 3 Pages: 275-285

    • DOI

      10.1124/mol.116.104570

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] On the mechanism of gating defects caused by the R117H mutation in CFTR.2016

    • Author(s)
      Yu YC, Sohma Y, Hwang TC
    • Journal Title

      The Journal of Physiology

      Volume: 000.0 Issue: 12 Pages: 1-18

    • DOI

      10.1113/jp271723

    • Related Report
      2016 Annual Research Report 2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Water-meditated forces between the nucleotide binding domains generate the power stroke in an ABC transporter2014

    • Author(s)
      Furukawa-Hagiya T, Yoshida N, Chiba S, Hayashi T, Furuta T, Sohma Y, Sakurai M
    • Journal Title

      Chemical Physics Letters

      Volume: 616 - 617 Pages: 165-170

    • DOI

      10.1016/j.cplett.2014.10.038

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Expression and localization of aquaporin-4 in sensory ganglia2014

    • Author(s)
      J Kato, Y Takai, M K Hayashi, Y Kato, M Tanaka, Y Soma, Y Abe, M Yasui
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 451 Issue: 4 Pages: 562-567

    • DOI

      10.1016/j.bbrc.2014.08.026

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Glucose-induced electrical activities and insulin secretion in pancreatic islet β-cells are modulated by CFTR2014

    • Author(s)
      Guo JH, Chen H, Ruan YC, Zhang XL, Zhang XH, Fok KL, Tsang LL, Yu MK, Huang WQ, Sun X, Chung YW, Jiang X, Sohma Y, Chan HC
    • Journal Title

      Nature Communications

      Volume: 5 Issue: 1 Pages: 4420-4420

    • DOI

      10.1038/ncomms5420

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Curcumin and Genistein: the combined effects on disease-associated CFTR mutants and their clinical implications.2013

    • Author(s)
      Sohma Y, Yu YC, Hwang TC
    • Journal Title

      Current Pharmaceutical Design

      Volume: 19 Issue: 19 Pages: 3521-3528

    • DOI

      10.2174/13816128113199990320

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Amiodarone inhibits apamin-sensitive potassium currents2013

    • Author(s)
      Turker I, Yu CC, Chang PC, Chen Z, Sohma Y, Lin SF, Chen PS, Ai T
    • Journal Title

      PLoS One

      Volume: 8 Issue: 7 Pages: e70450-e70450

    • DOI

      10.1371/journal.pone.0070450

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mechanisms underlying regional differences in the Ca2+ sensitivity of BKCa current in arteriolar smooth muscle.2013

    • Author(s)
      Yang Y, Sohma Y, Nourian Z, Ella SR, Li M, Stupica A, Korthuis RJ, Davis MJ, Braun AP, Hill M
    • Journal Title

      Journal of Physiology

      Volume: 591 Issue: 5 Pages: 1277-1293

    • DOI

      10.1113/jphysiol.2012.241562

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 特集 チャネル1分子を動画で見たい。 ABCトランスポーター CFTチャネルのATP駆動性ゲーティング:静止画から動画へ2013

    • Author(s)
      相馬義郎、山下隼人
    • Journal Title

      日本薬理学雑誌

      Volume: 141 Pages: 230-234

    • Related Report
      2013 Annual Research Report
  • [Presentation] Characterization of a CFTR-mutant frequently found in Japanese cystic fibrosis patients.2017

    • Author(s)
      Nakao K, Nakakuki M, Ishiguro H, Sohma Y
    • Organizer
      14th Eeuropean Cystic Fibrosis Society Basic Science Conference
    • Place of Presentation
      Algarve, Portugal
    • Year and Date
      2017-03-29
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 嚢胞性線維症日本人患者から同定された変異型CFTRの特性解析2017

    • Author(s)
      中尾香菜子、石倉麗音奈、中莖みゆき、石黒 洋、政池知子、相馬義郎
    • Organizer
      第94回日本生理学会年会
    • Place of Presentation
      アクトシティ浜松(静岡県浜松市)
    • Year and Date
      2017-03-28
    • Related Report
      2016 Annual Research Report
  • [Presentation] 日本人嚢胞性線維症患者から同定されたCFTR変異体の解析2017

    • Author(s)
      中尾香菜子、石倉麗音奈、中莖みゆき、安井正人、石黒 洋、政池知子、相馬義郎
    • Organizer
      第90回日本薬理学会年会
    • Place of Presentation
      長崎ブリックホール(長崎県長崎市)
    • Year and Date
      2017-03-15
    • Related Report
      2016 Annual Research Report
  • [Presentation] CFTR and AQP: Two channels deeply involved into incurable diseases2016

    • Author(s)
      相馬義郎
    • Organizer
      第93回日本生理学会年会シンポジウム
    • Place of Presentation
      札幌コンベンションセンター、札幌
    • Year and Date
      2016-03-22
    • Related Report
      2015 Annual Research Report
  • [Presentation] Dynamic Bindings of Autoimmune IgG Antibodies against Autoantigen Membrane Proteins directly Observed by High-Speed Atomic Force Microscopy (HS-AFM)2015

    • Author(s)
      Sohma Y
    • Organizer
      The Second Kitasato-Yale Fluid Symposium: Molecular Control of Cellular and Epithelial Function
    • Place of Presentation
      北里大学、白金、東京
    • Year and Date
      2015-12-05
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 高速原子間力顕微鏡を用いた 水チャネル AQP4 への 自己抗体の 結合・解離動態の直接観察2015

    • Author(s)
      相馬義郎、山下隼人
    • Organizer
      平成27年度生理学研究所研究会「生体ホメオスタシスのgatewayとしての上皮膜輸送マイクロホメオスタシス
    • Place of Presentation
      生理学研究所、岡崎
    • Year and Date
      2015-09-15
    • Related Report
      2015 Annual Research Report
  • [Presentation] Monitoring ATP-hydrolysis cycle by electro-physiological approach: Patch-clamp recordings of CFTR2015

    • Author(s)
      相馬義郎
    • Organizer
      第53回日本生物物理学会年会シンポジウム
    • Place of Presentation
      金沢大学、金沢
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] 高速原子間力顕微鏡を用いた膜蛋白への抗体結合・解離動態の直接観察2015

    • Author(s)
      相馬義郎、山下隼人
    • Organizer
      平成27年度生理学研究所研究会「膜システムの機能的・構造的統合
    • Place of Presentation
      生理学研究所、岡崎
    • Year and Date
      2015-09-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] Expression, function and phenotype of CFTR mutants found in Japanese CF patients2015

    • Author(s)
      Sohma Y, Yu Y, Nakakuki M, Ishiguro H
    • Organizer
      The 92th Annual Meeting of The Physiological Society of Japan
    • Place of Presentation
      Kobe, Japan
    • Year and Date
      2015-03-21 – 2015-03-23
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Two novel direct observations in membrane transports: transepithelial water diffusion and single channel molecules2015

    • Author(s)
      Sohma Y
    • Organizer
      Kitasato-Yale Fluid Symposium 2015
    • Place of Presentation
      Tokyo, Japan
    • Year and Date
      2015-03-02
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Two novel approaches to CFTR single molecular dynamics and water transport physiology: high-speed AFM and CARS microscopy2015

    • Author(s)
      Sohma Y
    • Organizer
      Seminar, Cystic Fibrosis Center, The University of North Carolina at Chapel Hill
    • Place of Presentation
      Chapel Hill, NC, USA
    • Year and Date
      2015-02-20
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Mechanism of ATP-dependent gating in CFTR channels2014

    • Author(s)
      Sohma Y
    • Organizer
      Australian Physiological Society Meeting 2014
    • Place of Presentation
      Brisbane, Australia
    • Year and Date
      2014-11-30 – 2014-12-03
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Let’s “See” ATP-dependent gating of CFTR channels2014

    • Author(s)
      Sohma Y
    • Organizer
      The 45th NIPS International Symposium “Cutting-edge approaches towards the functioning mechanisms of membrane proteins”
    • Place of Presentation
      Okazaki, Japan
    • Year and Date
      2014-11-25 – 2014-11-28
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Structure and fluctuation of single CFTR molecules observed by high-speed atomic force microscopy2014

    • Author(s)
      Sohma Y
    • Organizer
      International symposium“Cystic fibrosis in Asia from basics to clinics”
    • Place of Presentation
      Nagoya, Japan
    • Year and Date
      2014-09-29 – 2014-09-30
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Expression and function of CFTR mutants found in Japanese CF patients2014

    • Author(s)
      Yu Y, Nakakuki M, Ishiguro H, Sohma Y
    • Organizer
      International symposium“Cystic fibrosis in Asia from basics to clinics”
    • Place of Presentation
      Nagoya, Japan
    • Year and Date
      2014-09-29 – 2014-09-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] Studies on the mechanism of a chloride channel CFTR in comparison with ion pumps2014

    • Author(s)
      Masaike T, Sohma Y
    • Organizer
      The 52th Annual Meeting, The Biophysical Society of Japan
    • Place of Presentation
      Kyoto, Japan
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] CARS顕微鏡と高速原子間力顕微鏡: 上皮膜輸送研究に有用な2つの革新的測定技術2014

    • Author(s)
      相馬義郎、山下隼人、余 盈君、安井正人
    • Organizer
      第91回日本生理学会大会
    • Place of Presentation
      鹿児島大学郡元キャンパス
    • Related Report
      2013 Annual Research Report
  • [Presentation] ABC トランスポータCFTR チャネルのATP 駆動ゲーティング機構2013

    • Author(s)
      相馬義郎
    • Organizer
      第341 回 情報計算化学生物学会研究講演会
    • Place of Presentation
      東京大学山上会館大会議室
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 高速AFMによる膜機能分子のゆらぎの直接観察2013

    • Author(s)
      相馬義郎、山下隼人
    • Organizer
      平成25年度 生理研研究会 「膜機能分子の機能・構造ゆらぎの時空間スペクトル解析」
    • Place of Presentation
      岡崎コンファレンスセンター、岡崎市、愛知県
    • Related Report
      2013 Annual Research Report
  • [Presentation] 高速AFMによるアクアポリン4チャネルの直接観察2013

    • Author(s)
      山下隼人、会津心之亮、加藤純悟、阿部陽一郎、安井正人、相馬義郎
    • Organizer
      第 51 回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館
    • Related Report
      2013 Annual Research Report
  • [Presentation] 分子動力学シミュレーションで探るCFTRにおける変異の影響2013

    • Author(s)
      小寺充彦、萩谷朋佳、古田忠臣、相馬義郎、櫻井 実
    • Organizer
      第 51 回日本生物物理学会年会
    • Place of Presentation
      国立京都国際会館
    • Related Report
      2013 Annual Research Report
  • [Book] Cystic fibrosis and the CFTR anion channel. In: Handbook of Ion Channels2015

    • Author(s)
      Sohma Y, Hwang TC
    • Total Pages
      671
    • Publisher
      CRC Press Taylor & Francis Books Inc
    • Related Report
      2014 Annual Research Report
  • [Remarks] 慶應義塾大学医学部薬理学教室教員紹介

    • URL

      http://www.pharm.med.keio.ac.jp/about/sohma.html

    • Related Report
      2016 Annual Research Report
  • [Remarks] 相馬 義郎 - 慶應義塾大学医学部薬理学教室 - Keio University

    • URL

      http://www.pharm.med.keio.ac.jp/about/sohma.html

    • Related Report
      2015 Annual Research Report
  • [Remarks] Yoshiro Sohma - DCRC UMC

    • URL

      http://dalton.missouri.edu/investigators/sohmay.php

    • Related Report
      2015 Annual Research Report
  • [Remarks] 慶應義塾大学医学部薬理学教室

    • URL

      http://www.pharm.med.keio.ac.jp/about/sohma.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] Dalton Research Center, Univ of Missouri, USA

    • URL

      http://dalton.missouri.edu/investigators/sohmay.php

    • Related Report
      2014 Annual Research Report
  • [Remarks] 慶應義塾大学医学部薬理学教室

    • URL

      http://www.pharm.med.keio.ac.jp/about/sohma.html

    • Related Report
      2013 Annual Research Report
  • [Remarks] Dalton Research Center, Univ of Missouri, USA

    • URL

      http://dalton.missouri.edu/investigators/sohmay.php

    • Related Report
      2013 Annual Research Report

URL: 

Published: 2013-05-21   Modified: 2022-02-16  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi