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Detection of diverse aquatic microbes in lungs and blood of drowning and non-drowning victims by a metagenomic approach

Research Project

Project/Area Number 25293163
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Legal medicine
Research InstitutionUniversity of Miyazaki

Principal Investigator

YUKAWA Nobuhiro  宮崎大学, 医学部, 教授 (30240154)

Co-Investigator(Kenkyū-buntansha) HAYASHI TETSUYA  九州大学, 大学院医学研究院, 教授 (10173014)
KAKIZAKI EIJI  宮崎大学, 医学部社会医学講座法医学分野, 准教授 (70284833)
小澤 周二  三重大学, 医学(系)研究科(研究院), 講師 (20379944)
Co-Investigator(Renkei-kenkyūsha) OGURA YOSHITOSHI  九州大学, 大学院医学研究院, 准教授 (40363585)
Research Collaborator SONODA AI  宮崎大学, 医学部社会医学講座法医学分野, 助手 (10762122)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥17,550,000 (Direct Cost: ¥13,500,000、Indirect Cost: ¥4,050,000)
Fiscal Year 2015: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2014: ¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2013: ¥7,280,000 (Direct Cost: ¥5,600,000、Indirect Cost: ¥1,680,000)
Keywords法医学 / 溺死 / 水棲微生物 / プランクトン / 水棲細菌 / 珪藻 / 藍藻(シアノバクテリア) / 454-pyrosequencing / Pyrosequencing
Outline of Final Research Achievements

We used a high-throughput 454-pyrosequencing strategy to detect diverse aquatic microbes in the lungs (56 specimens) and blood (72 specimens)of 19 drowning and 13 non-drowning victims. This technique was very useful for determining the diversity of aquatic microbes such as bacteria including cyanobacteria, diatoms and other algae in drowning victims. This technique therefore has high potential as a novel molecular tool with which to examine whether an immersed victim has drowned, especially when the results of conventional diatom testing or other useful approaches are equivocal. To the best of our knowledge, this is the first attempt to use a next generation sequencer to investigate diverse aquatic microbes in the lungs and blood of many drowning and non-drowning victims.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (4 results)

All 2016 2015 2014

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Acknowledgement Compliant: 1 results) Presentation (3 results)

  • [Journal Article] Simple protocol for extracting diatoms from lung tissues of suspected drowning cases within 3 h: First practical application2015

    • Author(s)
      Eiji Kakizaki, Nobuhiro Yukawa
    • Journal Title

      Forensic Science International

      Volume: 251 Pages: 179-185

    • DOI

      10.1016/j.forsciint.2015.03.025

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] 溺死の診断のためのLAMP法を用いた簡易・迅速検査法の開発:属特異的Primerを用いたAeromonas属細菌の検出2016

    • Author(s)
      柿崎英二,園田 愛,湯川修弘
    • Organizer
      第100次日本法医学会学術全国集会
    • Place of Presentation
      きゅりあん(東京都)
    • Year and Date
      2016-06-16
    • Related Report
      2015 Annual Research Report
  • [Presentation] 危険な強酸を用いずに安全かつ簡便迅速に行える新しい珪藻検査法の開発2015

    • Author(s)
      柿崎英二, 松田晴那, 園田 愛, 湯川修弘.
    • Organizer
      第99次日本法医学会学術全国集会
    • Place of Presentation
      高知市
    • Year and Date
      2015-06-11 – 2015-06-12
    • Related Report
      2014 Annual Research Report
  • [Presentation] A simple protocol for extracting diatoms from lung tissues of immersed victims using commercial reagents within three hours2014

    • Author(s)
      Eiji Kakizaki E, Nobuhiro Yukawa
    • Organizer
      9th International Symposium Advances in Legal Medicine (ISALM)
    • Place of Presentation
      Fukuoka, Japan
    • Year and Date
      2014-06-17 – 2014-06-20
    • Related Report
      2014 Annual Research Report

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Published: 2013-05-21   Modified: 2019-07-29  

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