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Development of engineered enzymes for synthesis of highly pure phosphatidylinositol

Research Project

Project/Area Number 25420830
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Biofunction/Bioprocess
Research InstitutionNagoya University

Principal Investigator

Iwasaki Yugo  名古屋大学, 生命農学研究科, 准教授 (50273214)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2014: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2013: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywordsphospholipase D / phosphatidylinositol / ホスホリパーゼD / ホスファチジルイノシトール / ホスホリパーゼ
Outline of Final Research Achievements

Protein engineering study on a phospholipase D (PLD) was performed in to synthesize phosphatidylinositol (PI), a functional phospholipid, with high purity. Analysis of many PLD variants with mutations at its substrate-binding pocket successfully identified some variants with excellent positional specificity. In addition, trimming an unstable loop structure from PLD molecule lead to the creation of another variant with both improved stability and high positional specificity. Moreover, during the optimization of the reaction conditions, we found that very high concentration of NaCl enhanced the PI yield. Furthermore, we discovered another enzyme that hydrolyzes phosphatidic acid (a unwanted side product) from a microorganism by screening.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (28 results)

All 2016 2015 2014 2013

All Journal Article (4 results) (of which Peer Reviewed: 3 results,  Acknowledgement Compliant: 2 results) Presentation (24 results) (of which Int'l Joint Research: 1 results,  Invited: 6 results)

  • [Journal Article] Directing positional specificity in enzymatic synthesis of bioactive 1-phosphatidylinositol by protein engineering of a phospholipase D.2016

    • Author(s)
      Damnjanovic, J., Kuroiwa, C., Tanaka, H., Ishida, K., Nakano, H., and Iwasaki, Y.
    • Journal Title

      Biotechnol. Bioeng.

      Volume: 113 Issue: 1 Pages: 62-71

    • DOI

      10.1002/bit.25697

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Salt-induced increase in the yield of enzymatically synthesized phosphatidylinositol and the underlying mechanism.2016

    • Author(s)
      Muraki, M., Damnjanovic, J., Nakano, H., and Iwasaki, Y.
    • Journal Title

      J. Biosci. Bioeng.

      Volume: in press Issue: 3 Pages: 276-282

    • DOI

      10.1016/j.jbiosc.2016.02.011

    • NAID

      40020949769

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Deletion of a dynamic surface loop improves stability and changes kinetic behavior of phosphatidylinositol-synthesizing Streptomyces phospholipase D.2014

    • Author(s)
      Jasmina Damnjanovic, Hideo Nakano and Yugo Iwasaki
    • Journal Title

      Biotechnology and Bioengineering

      Volume: 112 Issue: 4 Pages: 674-682

    • DOI

      10.1002/bit.25149

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] 放線菌ホスホリパーゼDの改変とリン脂質合成への応用2013

    • Author(s)
      岩崎雄吾
    • Journal Title

      オレオサイエンス

      Volume: 13 Pages: 465-469

    • NAID

      130005122085

    • Related Report
      2013 Research-status Report
  • [Presentation] 酵素によるホスファチジル-β-1-グルコースの合成2016

    • Author(s)
      井上ありさ, 安立昌篤, ダムニャノビッチヤスミナ, 中野秀雄, 岩崎雄吾.
    • Organizer
      第6回日本生物工学会 学際的脂質創生研究部会講演会
    • Place of Presentation
      徳島
    • Year and Date
      2016-01-22
    • Related Report
      2015 Annual Research Report
  • [Presentation] 高濃度塩の添加によるホスファチジルイノシトール酵素合成の効率化2016

    • Author(s)
      村木美智子, ダムニャノビッチヤスミナ, 中野秀雄, 岩崎雄吾
    • Organizer
      第6回日本生物工学会 学際的脂質創生研究部会講演会
    • Place of Presentation
      徳島
    • Year and Date
      2016-01-22
    • Related Report
      2015 Annual Research Report
  • [Presentation] Protein engineering and temperature control as means of directing positional specificity in phospholipase D-catalyzed synthesis of 1-phosphatidylinositol.2015

    • Author(s)
      Jasmina Damnjanovic, Chisato Kuroiwa, Ken Ishida, Hidetoshi Tanaka, Hideo Nakano, Yugo Iwasaki.
    • Organizer
      第67回日本生物工学会大会
    • Place of Presentation
      鹿児島
    • Year and Date
      2015-10-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] ホスファチジルイノシトール酵素合成の効率化2015

    • Author(s)
      村木 美智子, 中野 秀雄, 岩崎 雄吾.
    • Organizer
      第67回日本生物工学会大会
    • Place of Presentation
      鹿児島
    • Year and Date
      2015-10-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] Directing positional specificity in phospholipase D-catalyzed synthesis of 1-phosphatidylinositol.2015

    • Author(s)
      Jasmina Damnjanovic, Chisato Kuroiwa, Ken Ishida, Hidetoshi Tanaka, Michiko Muraki, Hideo Nakano, Yugo Iwasaki.
    • Organizer
      2015年度日本農芸化学会中部・関西支部合同大会
    • Place of Presentation
      射水
    • Year and Date
      2015-09-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] 1-ホスファチジル-β-D-グルコースの酵素合成2015

    • Author(s)
      井上ありさ, 安立昌篤,中野秀雄, Jasmina Damnjanovic, 岩崎雄吾.
    • Organizer
      2015年度日本農芸化学会中部・関西支部合同大会
    • Place of Presentation
      射水
    • Year and Date
      2015-09-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] Phospholipase D as a catalyst: application in phospholipid synthesis.2015

    • Author(s)
      Iwasaki Y., Damnjanovic J., and Nakano H.
    • Organizer
      6th International Conference on Fermentation Technology for Value-Added Agricultural Products.
    • Place of Presentation
      Kohn Kaen, Thailand
    • Year and Date
      2015-07-29
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 酵素によるホスファチジルイノシトール合成の効率化2015

    • Author(s)
      村木 美智子, 中野 秀雄, 岩崎 雄吾.
    • Organizer
      生物工学若手研究者の集い(若手会)夏のセミナー2015
    • Place of Presentation
      北名古屋
    • Year and Date
      2015-07-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] ホスファチジン酸ホスファターゼの開発2015

    • Author(s)
      太田 貴都, 岩崎 雄吾
    • Organizer
      生物工学若手研究者の集い(若手会)夏のセミナー2015
    • Place of Presentation
      北名古屋
    • Year and Date
      2015-07-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] 1 -ホスファチジル-β-D-グルコースの酵素合成2015

    • Author(s)
      井上 ありさ, 安立 昌篤, 中野 秀雄, ダムナニョヴィッチ ヤスミナ, 岩崎 雄吾.
    • Organizer
      生物工学若手研究者の集い(若手会)夏のセミナー2015
    • Place of Presentation
      北名古屋
    • Year and Date
      2015-07-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] Directing positional specificity in enzymatic synthesis of 1-phosphatidylinositol by protein engineering of a phospholipase D2014

    • Author(s)
      Damnjanovic J., Kuroiwa C., Muraki M., Ishida K., Tanaka H., Nakano H., Iwasaki Y.
    • Organizer
      The 13th China-Japan-Korea Joint Symposium on Enzyme Engineering
    • Place of Presentation
      Jeju
    • Year and Date
      2014-11-16 – 2014-11-20
    • Related Report
      2014 Research-status Report
  • [Presentation] Protein engineering of phospholipase D for phosphatidylinositol synthesis.2014

    • Author(s)
      Yugo Iwasaki, Jasmina Damnjanovic, Hideo Nakano.
    • Organizer
      Japan-Italy Joint Symposium.
    • Place of Presentation
      Nara
    • Year and Date
      2014-11-05 – 2014-11-07
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Engineering of a phospholipase D for positionaly-specific and efficient enzymatic synthesis of 1-phosphatidylinositol.2014

    • Author(s)
      Jasmina Damnjanovic, Chisato Kuroiwa, Michiko Muraki, Ken Ishida, Hidetoshi Tanaka, Hideo Nakano,Yugo Iwasaki.
    • Organizer
      Japan-Italy Joint Symposium.
    • Place of Presentation
      Nara
    • Year and Date
      2014-11-05 – 2014-11-07
    • Related Report
      2014 Research-status Report
  • [Presentation] ホスホリパーゼD のタンパク質工学による位置特異的ホスファチジルイノシトール合成の最適化2014

    • Author(s)
      黒岩 千智, 石田 健, 田中 秀俊, 中野 秀雄, 岩崎 雄吾
    • Organizer
      日本農芸化学会中部支部 第171回例会
    • Place of Presentation
      名古屋
    • Year and Date
      2014-10-11
    • Related Report
      2014 Research-status Report
  • [Presentation] Development of phospholipase D having phosphatidylinositol-synthesizing activity.2014

    • Author(s)
      Yugo Iwasaki, Jasmina Damnjanovic, Hideo Nakano.
    • Organizer
      1st Asian Conference on Oleo Science
    • Place of Presentation
      Sapporo
    • Year and Date
      2014-09-07 – 2014-09-10
    • Related Report
      2014 Research-status Report
  • [Presentation] 酵素の耐熱安定化のためのループトリミング法の確立とホスホリパーゼDへの応用2014

    • Author(s)
      岩崎雄吾
    • Organizer
      旭硝子財団 2014助成研究発表会
    • Place of Presentation
      東京
    • Year and Date
      2014-07-30
    • Related Report
      2014 Research-status Report
  • [Presentation] 放線菌ホスホリパーゼDの改変とリン脂質合成への応用2014

    • Author(s)
      岩崎雄吾
    • Organizer
      日本油化学会東海支部油化学セミナー
    • Place of Presentation
      名古屋
    • Year and Date
      2014-06-27
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] 微生物ホスホリパーゼの蛋白工学的改変2014

    • Author(s)
      岩崎 雄吾
    • Organizer
      日本油化学会2014 油脂産業技術部会・オレオライフサイエンス部会共催セミナー
    • Place of Presentation
      東京
    • Year and Date
      2014-06-19
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Enhancing the thermostability of phosphatidylinositol-synthesizing phospholipase D2014

    • Author(s)
      Yugo Iwasaki, Jasmina Damnjanovic, Hideo Nakano
    • Organizer
      105th AOCS Annual meeting and Expo
    • Place of Presentation
      San Antonio, USA
    • Year and Date
      2014-05-04 – 2014-05-08
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Engineering phospholipase D for stereoselective conversion of phosphatidylcholine into bioactive 1-phosphatidylinositol2014

    • Author(s)
      Damnjanovic J., Kuroiwa C., Ishida K., Tanaka H., Nakano H., Iwasaki Y.
    • Organizer
      71st Semi-annual Meeting of the Japanese Society of Enzyme Engineering
    • Place of Presentation
      Fukuoka
    • Year and Date
      2014-04-26
    • Related Report
      2014 Research-status Report
  • [Presentation] 放線菌ホスホリパーゼDの蛋白工学的機能改変2013

    • Author(s)
      岩崎雄吾
    • Organizer
      第69回酵素工学研究会
    • Place of Presentation
      名古屋
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] ホスファチジルイノシトール合成型ホスホリパーゼDの位置選択性向上2013

    • Author(s)
      黒岩千智、石田健、 田中秀俊、中野 秀雄、岩崎雄吾
    • Organizer
      日本生物工学会2013年65回大会
    • Place of Presentation
      広島
    • Related Report
      2013 Research-status Report
  • [Presentation] Gate-forming loops keep the substrate bound inside the active site of Streptomyces phospholipase D.2013

    • Author(s)
      Jasmina Damnjanovic, Hideo Nakano, Yugo Iwasaki
    • Organizer
      日本生物工学会2013年65回大会
    • Place of Presentation
      広島
    • Related Report
      2013 Research-status Report
  • [Presentation] ホスファチジルイノシトール合成活性を有するホスホリパーゼDの1-PI特異性の向上2013

    • Author(s)
      黒岩千智、石田健、田中秀俊、中野秀雄、岩崎雄吾
    • Organizer
      日本農芸化学会中部支部第168回例会
    • Place of Presentation
      名古屋
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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