• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Identification of the mechanisms driving the onset of chronic inflammation by cigarette smoke

Research Project

Project/Area Number 25430182
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field System genome science
Research InstitutionOsaka University

Principal Investigator

Diez Diego  大阪大学, 免疫学フロンティア研究センター, 准教授 (90597741)

Co-Investigator(Kenkyū-buntansha) 熊谷 雄太郎  大阪大学, 免疫学フロンティア研究センター, 特任助教(常勤) (00528408)
Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2015: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2013: ¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
KeywordsSystems biology / Immunology / Bioinformatics / Inflammation / Chronic disease / Regulatory network / Immune system / Differentiation
Outline of Final Research Achievements

Exposure to tobacco and silica leads to Chronic Obstructive Pulmonary Disease and silicosis respectively, diseases marked by chronic inflammation and progression. This project aims to understand the mechanisms leading to chronic inflammation in a silicosis model. We expose mice to different silica doses for one month, then monitor disease progression in the lungs over one year. We measure immune cells number and gene expression 1, 3 and 12 months after exposure. Mice exposed to high silica doses during the first month show higher levels of inflammatory chemokines and recruitment of T cells after one year. Transcriptomic analysis identified 82 genes differentially expressed, with a prominent role of the antigen processing and presentation pathway.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (6 results)

All 2014 2013 Other

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Acknowledgement Compliant: 1 results) Presentation (2 results) (of which Invited: 2 results) Remarks (2 results)

  • [Journal Article] Network analysis in the investigation of chronic respiratory diseases. From basics to application.2014

    • Author(s)
      Diez, D., Agusti, A., & Wheelock, C. E.
    • Journal Title

      American Journal of Respiratory and Critical Care Medicine

      Volume: 190(9) Issue: 9 Pages: 981-988

    • DOI

      10.1164/rccm.201403-0421pp

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Systematic identification of transcriptional regulatory modules from protein-protein interaction networks2014

    • Author(s)
      Diego Diez, Andrew Paul Hutchins, Diego Miranda-Saavedra
    • Journal Title

      Nucleic Acids Research

      Volume: 42 Issue: 1 Pages: e6-e6

    • DOI

      10.1093/nar/gkt913

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] Distinct transcriptional regulatory modules regulate differentiation programs in the immune system2013

    • Author(s)
      Diego Diez
    • Organizer
      EMBO workshop: Complex systems in immunology
    • Place of Presentation
      Singapore
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Systematic Identification Of Transcriptional Regulatory Modules2013

    • Author(s)
      Diego Diez, Andrew Paul Hutchins, Diego Miranda-Saavedra
    • Organizer
      The 24th CDB Meeting: Genomics and Epigenomics with Deep Sequencing
    • Place of Presentation
      Kobe, Japan
    • Related Report
      2013 Research-status Report
    • Invited
  • [Remarks] Bioconductor page hosting the rTRM project

    • URL

      http://www.bioconductor.org/packages/release/bioc/html/rTRM.html

    • Related Report
      2013 Research-status Report
  • [Remarks] Bioconductor page hosting the rTRM project (GUI)

    • URL

      http://www.bioconductor.org/packages/release/bioc/html/rTRMui.html

    • Related Report
      2013 Research-status Report

URL: 

Published: 2014-07-25   Modified: 2019-07-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi