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Sensing and mending mechanism of altered lipid asymmetry

Research Project

Project/Area Number 25440038
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Functional biochemistry
Research InstitutionHokkaido University

Principal Investigator

OBARA Keisuke  北海道大学, 薬学研究科(研究院), 助教 (30419858)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥5,330,000 (Direct Cost: ¥4,100,000、Indirect Cost: ¥1,230,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2013: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords細胞膜 / 脂質非対称 / 脂質 / センサー / 情報伝達 / 出芽酵母 / Rim101 / アルカリ / 酵母 / 生体膜
Outline of Final Research Achievements

In this research, we performed a detailed analysis of Rim21 which had been identified by us as the sensor protein for plasma membrane lipid asymmetry. As a result, we succeeded in identifying the sensor motif that directly recognizes the state of lipid asymmetry. We also found that the sensor motif interacts with some of negatively charged lipids. From these and other results, we proposed a model for sensing mechanism of altered lipid asymmetry by Rim21.
On the other hand, we also investigated cellular responses to altered lipid asymmetry. We focused on Opt2 which we previously identified as a key molecule in adapataion to altered lipid asymmetry. In consequence, we revealed that Opt2 mediates exposure of phospholipids to the outer leaflet of the plasma membrane.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (15 results)

All 2015 2014 2013 Other

All Journal Article (6 results) (of which Peer Reviewed: 5 results,  Acknowledgement Compliant: 3 results,  Open Access: 1 results) Presentation (9 results) (of which Int'l Joint Research: 1 results)

  • [Journal Article] The C-terminal cytosolic region of Rim21 senses alterations in plasma membrane lipid composition: Insights into sensing mechanisms for plasma membrane lipid asymmetry2015

    • Author(s)
      Nishino K, Obara K, and Kihara A
    • Journal Title

      J Biol Chem

      Volume: 290 Issue: 52 Pages: 30797-30805

    • DOI

      10.1074/jbc.m115.674382

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Opt2 mediates the exposure of phospholipids during cellular adaptation to altered lipid asymmetry.2015

    • Author(s)
      Yamauchi S, Obara K, Uchibori K, Kamimura A, Azumi K, and Kihara A
    • Journal Title

      J Cell Sci

      Volume: 128 Pages: 61-69

    • DOI

      10.1242/jcs.153890

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Signaling events of the Rim101 pathway occur at the plasma membrane in a ubiquitination-dependent manner.2014

    • Author(s)
      Obara K and Kihara A
    • Journal Title

      Mol Cell Biol

      Volume: 34 Issue: 18 Pages: 3525-3534

    • DOI

      10.1128/mcb.00408-14

    • NAID

      120005525215

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Yeast and mammalian autophagosomes exhibit distinct phosphatidylinositol 3-phosphate asymmetries2014

    • Author(s)
      Cheng J, Fujita A, Yamamoto H, Tatematsu T, Kakuta S, Obara K, Ohsumi Y, Fujimoto T.
    • Journal Title

      Nat. Commun.

      Volume: 5 Issue: 1 Pages: 3207-3207

    • DOI

      10.1038/ncomms4207

    • Related Report
      2013 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Unperverted synthesis of complex sphingolipids is essential for cell survival under nitrogen starvation2013

    • Author(s)
      Yamagata M, Obara K, Kihara A
    • Journal Title

      Genes Cells

      Volume: 18 Issue: 8 Pages: 650-659

    • DOI

      10.1111/gtc.12062

    • NAID

      120005367401

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] オートファジーに関わるタンパク質とその役割2013

    • Author(s)
      小林孝文、小原圭介、大隅良典
    • Journal Title

      ファルマシア

      Volume: 49 Pages: 508-512

    • Related Report
      2013 Research-status Report
  • [Presentation] Rim21は細胞質領域の荷電アミノ酸残基を用いて細胞膜の脂質非対称を感知する2015

    • Author(s)
      西野佳菜子、小原圭介、木原章雄
    • Organizer
      第38回日本分子生物学会年会・第88回日本生化学会大会合同大会
    • Place of Presentation
      神戸コンベンションセンター(兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] 脂質非対称センサーRim21はERストレスを感知して適応反応に寄与する2015

    • Author(s)
      小原圭介、木原章雄
    • Organizer
      第38回日本分子生物学会年会・第88回日本生化学会大会合同大会
    • Place of Presentation
      神戸コンベンションセンター(兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] Mechanism for sensing lipid asymmetry of the plasma membrane and external alkalization.2015

    • Author(s)
      Obara K, Nishino K, and Kihara A
    • Organizer
      27th International Conference on Yeast Genetics and Molecular Biology (ICYGMB)
    • Place of Presentation
      Levico Terme (Italy)
    • Year and Date
      2015-09-06
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ユビキチンとESCRT複合体による細胞膜脂質非対称および外界アルカリ化シグナルの伝達2015

    • Author(s)
      小原圭介、西野佳菜子、木原章雄
    • Organizer
      第67回日本細胞生物学会大会
    • Place of Presentation
      タワーホール船堀(東京都江戸川区)
    • Year and Date
      2015-06-30
    • Related Report
      2015 Annual Research Report
  • [Presentation] Rim21 senses alteration in plasma membrane lipid asymmetry and elicits the signal at the plasma membrane in a ubiquitination-dependent manner2014

    • Author(s)
      Obara K, Nishino K and Kihara A
    • Organizer
      The FEBS EMBO 2014 conference
    • Place of Presentation
      Paris
    • Year and Date
      2014-08-30 – 2014-09-04
    • Related Report
      2014 Research-status Report
  • [Presentation] リン脂質のフロップに関わる新規因子Opt2の発見2014

    • Author(s)
      小原圭介、山内佐織、木原章雄
    • Organizer
      第66回日本細胞生物学会大会
    • Place of Presentation
      奈良
    • Year and Date
      2014-06-11 – 2014-06-13
    • Related Report
      2014 Research-status Report
  • [Presentation] 細胞膜脂質非対称センサーの同定

    • Author(s)
      小原圭介、山本林、木原章雄
    • Organizer
      第65回日本細胞生物学会大会
    • Place of Presentation
      ウインク愛知(愛知)
    • Related Report
      2013 Research-status Report
  • [Presentation] リン脂質のフロップに関与する新規酵母因子Opt2の単離・解析

    • Author(s)
      山内佐織、小原圭介、 木原章雄
    • Organizer
      第86回日本生化学会大会
    • Place of Presentation
      パシフィコ横浜(神奈川)
    • Related Report
      2013 Research-status Report
  • [Presentation] ユビキチン化が脂質非対称および外界アルカリ化シグナルを細胞膜上で媒介する

    • Author(s)
      小原圭介、 木原章雄
    • Organizer
      第36回日本分子生物学会
    • Place of Presentation
      神戸国際展示場(兵庫)
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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