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Atomic structure of cytochrome bd-type terminal oxidase in the respiratory chain and response to environment.

Research Project

Project/Area Number 25440050
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Functional biochemistry
Research InstitutionKyushu Institute of Technology

Principal Investigator

Sakamoto Junshi  九州工業大学, 大学院情報工学研究院, 教授 (80175364)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2015: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2014: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2013: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywordsシトクロム / 呼吸鎖 / 好熱性細菌 / グラム陽性菌 / 生体ネエルギー変換 / 電子伝達系 / 結晶構造 / 抗菌薬 / アミノ酸生産菌 / 生体エネルギー変換 / コリネバクテリア / コリネバクテリアム
Outline of Final Research Achievements

With improving the conditions of gene expression, host cell culture, and enzyme purification, we have succeeded in getting a highly resolved stereostructure of cytochrome bd-type menaquinol oxidase in respiratory chain of Gram-positive thermoplilic bacterium Geobacillus thermodenitirificans K1041 strain, based on a collaboration with X-ray crystallography technique by foreign researchers. This is the first atomic structure of cytochrome bd-type oxidase and does not resemble to the heme-copper oxidases or any other known proteins at all.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (10 results)

All 2016 2015 2014 Other

All Int'l Joint Research (2 results) Journal Article (2 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 2 results,  Open Access: 2 results,  Acknowledgement Compliant: 2 results) Presentation (6 results)

  • [Int'l Joint Research] マックスプランク生物物理学研究所(ドイツ)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research]

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Structure of a bd oxidase indicates similar mechanisms for membrane-integrated oxygen reductases.2016

    • Author(s)
      Safarian S, Rajendran C, Muller H, Preu J, Langer JD, Ovchinnikov S, Hirose T, Kusumoto T, Sakamoto J, Michel H.
    • Journal Title

      Science

      Volume: 352 Issue: 6285 Pages: 583-586

    • DOI

      10.1126/science.aaf2477

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Monitoring the enzyme expression in a respiratory chain of Corynebacterium glutamicum in a copper ion-supplemented culture medium.2015

    • Author(s)
      Kusumoto T, Aoyagi M , Sugiyama T, Sakamoto J
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 79 Issue: 2 Pages: 223-229

    • DOI

      10.1080/09168451.2014.968089

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 呼吸鎖シトクロムbd型キノール酸化酵素の最初の結晶構造と、グラム陽性病原菌薬の探索2015

    • Author(s)
      Safarian Schara、広瀬太一朗、楠本朋一郎、下牧瀬拓郎、中垣沙也香、坂本順司、Hartmut Michel
    • Organizer
      日本生体エネルギー研究会第41回討論会
    • Place of Presentation
      東京大学医学部1号館講堂
    • Year and Date
      2015-12-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] アミノ酸生産菌のシトクロムbcc-aa3超複合体はタイプII NADH脱水素酵素も含む拡張型である。2014

    • Author(s)
      椎葉千尋、楠本朋一郎、坂本順司
    • Organizer
      第87回日本生化学会大会。
    • Place of Presentation
      京都、国際会館
    • Year and Date
      2014-10-18
    • Related Report
      2014 Research-status Report
  • [Presentation] Factors in culture medium enhancing amino acid production and switching branches of the respiratory chain of Corynebacterium glutamicum.2014

    • Author(s)
      Sakamoto J, Sasaki M, Shiiba T, Kusumoto T
    • Organizer
      18th European Bioenergetics Conference
    • Place of Presentation
      Lisbon, Portugal
    • Year and Date
      2014-07-12 – 2014-07-17
    • Related Report
      2014 Research-status Report
  • [Presentation] グラム陽性好熱菌のシトクロム bd 型メナキノール酸化酵素の活性と調製法改良

    • Author(s)
      稻留舞、荻野耕平、坂本順司
    • Organizer
      日本生物工学会九州支部会
    • Place of Presentation
      佐賀大学
    • Related Report
      2013 Research-status Report
  • [Presentation] アミノ酸生産菌の分枝した呼吸鎖酵素のスイッチングおよびアミノ酸生産能増強に関与する因子の解明

    • Author(s)
      佐々木みなせ、椎葉千尋、楠本朋一郎、坂本順司
    • Organizer
      日本生体エネルギー研究会
    • Place of Presentation
      静岡県コンベンションアーツセンター
    • Related Report
      2013 Research-status Report
  • [Presentation] 好熱菌呼吸鎖の、特異なB 型呼吸鎖酵素と基質酸性シトクロムc との複合体状態の検討

    • Author(s)
      笹倉涼平、平井乃梨子、坂本順司
    • Organizer
      日本生体エネルギー研究会
    • Place of Presentation
      静岡県コンベンションアーツセンター
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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