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Genomic stability by tetraploidization in orchids and elucidation of its molecular cytogenetic mechanism

Research Project

Project/Area Number 25450006
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Science in genetics and breeding
Research InstitutionOsaka Kyoiku University

Principal Investigator

Mukai Yasuhiko  大阪教育大学, 教育学部, 教授 (30110795)

Co-Investigator(Kenkyū-buntansha) 鈴木 剛  大阪教育大学, 教育学部, 教授 (10314444)
Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2015: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2014: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2013: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywordsラン科植物 / 四倍体 / GISH法 / 動原体 / CENH3 / メチル化 / ヒストンリン酸化抗体 / BACライブラリー / 4倍体 / フウラン / 花のサイズ / 4倍体 / 減数分裂 / 四価染色体 / バンダ属 / エピジェネティック / GISH / ヒストン修飾 / BACクローン
Outline of Final Research Achievements

We have elucidated the mechanism of genetic stabilization of tetraploids and amphidiploids from inter- and intra-generic hybrids in the subtribe Aeridinae of tribe Vandae which is monophyletic, mostly epiphytic and comprises horticultural valued genera including Vanda, Neofinetia, Ascocentrum, Rhynchostylis. Epigenetic chromatin dynamics by DNA methylation and histone modification were visualized at the chromosome and DNA level using the GISH and immunological staining method. As the molecular mechanism involved in the stabilization of tetraploid seems to be related to the structure of kinetochores, and as clue to unvovering it has been found by conducting the contruction of BAC library such as Neofinetia falcata and the identification of CENH3.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (19 results)

All 2016 2015 2014 2013

All Journal Article (5 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 5 results,  Acknowledgement Compliant: 3 results,  Open Access: 1 results) Presentation (13 results) (of which Int'l Joint Research: 4 results,  Invited: 1 results) Book (1 results)

  • [Journal Article] Distinct chromatin environment associated with phosphorylated H3S10 histone during pollen mitosis I in orchids.2016

    • Author(s)
      Sharma S.K., Yamamoto M., Mukai Y.
    • Journal Title

      Protoplasma

      Volume: - Issue: 1 Pages: 161-165

    • DOI

      10.1007/s00709-015-0925-z

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Dual modified anti-phospho(Ser10)-acetyl(Lys14)-histone H3 predominantly mark the peri-centromeric chromatin during mitosis in monokinetic plants2016

    • Author(s)
      Sharma S.K., Yamamoto M., Mukai Y.
    • Journal Title

      Journal of Genetics

      Volume: -

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Chromosome research in orchids: current status and future prospects with special emphasis from molecular and epigenetic perspective.2015

    • Author(s)
      Sharma S.K. and Mukai Y.
    • Journal Title

      Nucleus

      Volume: 58 Issue: 3 Pages: 173-184

    • DOI

      10.1007/s13237-015-0152-1

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Molecular cytogenetic use of BAC clones in Neofinetia falcata and Rhynchostylis coelestis.2015

    • Author(s)
      Matsuba A., Fujii M., Lee S. S., Suzuki G., Yamamoto M. and Mukai Y.
    • Journal Title

      Nucleus

      Volume: 58 Issue: 3 Pages: 207-210

    • DOI

      10.1007/s13237-015-0147-y

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Immuno-cytogenetic manifestation of epigenetic chromatin modification marks in plants.2015

    • Author(s)
      Sharma S.K., Yamamoto M, Mukai Y.
    • Journal Title

      Planta

      Volume: 241 Issue: 2 Pages: 291-301

    • DOI

      10.1007/s00425-014-2233-9

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] Chromosome biology in orchids: insights from molecular cytogenetics2016

    • Author(s)
      向井 康比己
    • Organizer
      IPMB (Institute of Plant and Microbiology) Seminar
    • Place of Presentation
      中央研究院(台北、台湾)
    • Year and Date
      2016-12-27
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Recent trends in orchid chromosome research2015

    • Author(s)
      Mukai Y.
    • Organizer
      5th Asian Chromosome Colloquium (ACC5)
    • Place of Presentation
      カセサート大学、タイ(バンコク)
    • Year and Date
      2015-04-30
    • Related Report
      2014 Research-status Report
  • [Presentation] BAC-FISH analysis in Rhynchostylis and Neofinetia (Orchidaceae)2015

    • Author(s)
      Lee Shan Shan,
    • Organizer
      5th Asian Chromosome Colloquium (ACC5)
    • Place of Presentation
      カセサート大学、タイ(バンコク)
    • Year and Date
      2015-04-30
    • Related Report
      2014 Research-status Report
  • [Presentation] Cytogenetic landscape of epigenetic signatures in Cymbidium sinense (Orchidaceae).2015

    • Author(s)
      Sharma S.K. and Mukai Y.
    • Organizer
      5th Asian Chromosome Colloquium (ACC5)
    • Place of Presentation
      カセサート大学、タイ(バンコク)
    • Year and Date
      2015-04-29
    • Related Report
      2014 Research-status Report
  • [Presentation] Orchid BAC libraries for molecular cytogenetic research2015

    • Author(s)
      Suzuki G.
    • Organizer
      5th Asian Chromosome Colloquium (ACC5)
    • Place of Presentation
      カセサート大学、タイ(バンコク)
    • Year and Date
      2015-04-29
    • Related Report
      2014 Research-status Report
  • [Presentation] Recent trends in orchid chromosome research2015

    • Author(s)
      Mukai Y.
    • Organizer
      5th Asian Chromosome Colloquium (ACC5)
    • Place of Presentation
      Bangkok, Thailand
    • Year and Date
      2015-04-28
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Cytogenetic landscape of epigenetic signatures in Cymbidium sinense (Orchidaceae2015

    • Author(s)
      Sharma S. K. and Mukai Y.
    • Organizer
      5th Asian Chromosome Colloquium (ACC5)
    • Place of Presentation
      Bangkok, Thailand
    • Year and Date
      2015-04-28
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Orchid BAC libraries for molecular cytogenetic research2015

    • Author(s)
      Suzuki G.
    • Organizer
      5th Asian Chromosome Colloquium (ACC5)
    • Place of Presentation
      Bangkok, Thailand
    • Year and Date
      2015-04-28
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] BAC-FISH analysis in Rhynchostylis and Neofinetia (Orchidaceae)2015

    • Author(s)
      Lee Shan Shan
    • Organizer
      5th Asian Chromosome Colloquium (ACC5)
    • Place of Presentation
      Bangkok, Thailand
    • Year and Date
      2015-04-28
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] コチョウラン‘なごり雪’ のGISH解析2014

    • Author(s)
      向井琴美、横河由樹子、加藤成二、山本真紀、向井康比己
    • Organizer
      染色体学会第65回年会
    • Place of Presentation
      岡山大学資源植物科学研究所(倉敷)
    • Year and Date
      2014-10-25
    • Related Report
      2014 Research-status Report
  • [Presentation] ラン科植物属と属の細胞遺伝学的解析のためのBACライブラリー構築2014

    • Author(s)
      松葉篤・藤井美樹・鈴木剛・山本真紀・向井康比己
    • Organizer
      染色体学会第65回年会
    • Place of Presentation
      岡山大学資源植物科学研究所(倉敷)
    • Year and Date
      2014-10-25
    • Related Report
      2014 Research-status Report
  • [Presentation] A glimpse of male-meiotic and pollen-mitotic chromosomal landmarks in Dendrobium (Orchidaceae)2014

    • Author(s)
      Sharma S.K. and Mukai Y.
    • Organizer
      染色体学会第65回年会
    • Place of Presentation
      岡山大学資源植物科学研究所(倉敷)
    • Year and Date
      2014-10-25
    • Related Report
      2014 Research-status Report
  • [Presentation] ラン科交配雑種Neostylis Lou Snearyにおける分子細胞遺伝学的解析2013

    • Author(s)
      向井康比己、山崎晴加、横河由樹子、山本真紀
    • Organizer
      染色体学会
    • Place of Presentation
      富山大学五福キャンパス 黒田講堂
    • Related Report
      2013 Research-status Report
  • [Book] Sustainable Development and Biodiversity 11 Molecular Breeding for Sustainable Crop Improvement, Vol. 22016

    • Author(s)
      Sharma S.K., Yamamoto M, and Mukai Y.
    • Total Pages
      478
    • Publisher
      Springer Verlag
    • Related Report
      2015 Research-status Report

URL: 

Published: 2014-07-25   Modified: 2019-07-29  

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