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Functional analysis of mature ribosome degradation by RNase T2 in Saccharomyces cerevisiae

Research Project

Project/Area Number 25450093
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied microbiology
Research InstitutionThe University of Tokyo

Principal Investigator

Ogawa Tetsuhiro  東京大学, 農学生命科学研究科, 助教 (40323480)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2015: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2014: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2013: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Keywords出芽酵母 / リボソーム / リボヌクレアーゼ / ストレス応答
Outline of Final Research Achievements

In this study, we tried to elucidate the molecular mechanism of mature ribosome degradation observed in Saccharomyces cerevisiae by the treatment of rapamycin, an antibiotic inducing cellular starvation response. 18S and 25S ribosomal RNA (rRNA) is degraded by Rny1p, which belongs to the conserved RNase T2 family. Ribosomal proteins are also degraded in the same condition. These results indicate that mature ribosomes are actually degraded by the rapamycin treatment, which results in adaptation of host cells to the starvation condition. The degradation partly occurs in the vacuole, which depends on non-selective autophagy pathway. However, most of ribosomes seem to be degraded outside the vacuole.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (6 results)

All 2016 2015 2014 2013

All Journal Article (3 results) (of which Peer Reviewed: 3 results) Presentation (3 results)

  • [Journal Article] Transfer-messenger RNA and SmpB mediate bacteriostasis in Escherichia coli cells against tRNA cleavage.2015

    • Author(s)
      Sakai, F., Sugita,R., Chang, J.-W., Ogawa, T., Hidaka, M., Masaki, H.
    • Journal Title

      Microbiology

      Volume: 161 Issue: 10 Pages: 2019-2028

    • DOI

      10.1099/mic.0.000144

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mitochondrial tRNA cleavage by tRNA-targeting ribonuclease causes mitochondrial dysfunction observed in mitochondrial disease.2014

    • Author(s)
      Ogawa T, Shimizu A, Takahashi K, Hidaka M, Masaki H.
    • Journal Title

      Biochem Biophys Res Commun

      Volume: 451 Issue: 1 Pages: 131-136

    • DOI

      10.1016/j.bbrc.2014.07.084

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Evidence for DNA cleavage caused by a transfer-tRNA-targeting toxin.2013

    • Author(s)
      Shigematsu, M., Ogawa, T., Tanaka, W., Takahashi, K., Kitamoto, H.K., Hidaka, M, and Masaki, H,
    • Journal Title

      PLoS ONE

      Volume: 8 Issue: 9 Pages: 75512-75512

    • DOI

      10.1371/journal.pone.0075512

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] ラパマイシンに応答した出芽酵母リボソーム分解機構の解析2016

    • Author(s)
      赤川博文、陣内凱、島日佳理、大石早希子、大本哲也、小川哲弘、日高真誠、正木春彦
    • Organizer
      日本農芸化学会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2016-03-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] 出芽酵母RNase T2が関与するリボソーム分解機構の解析2015

    • Author(s)
      陣内 凱、島 日佳理、大石 早希子、大本 哲也、小川 哲弘、日高 真誠、正木 春彦
    • Organizer
      日本農芸化学会
    • Place of Presentation
      岡山大学
    • Year and Date
      2015-03-28
    • Related Report
      2014 Research-status Report
  • [Presentation] 出芽酵母RNase T2を介したストレス応答機構の解析2014

    • Author(s)
      陣内 凱、島 日佳理、大石 早希子、大本 哲也、小川 哲弘、日高 真誠、正木 春彦
    • Organizer
      日本農芸化学会
    • Place of Presentation
      明治大学生田キャンパス
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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