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Exploration of useful thermostable enzymes using Geobacillus spp. and their genetic engineering

Research Project

Project/Area Number 25450105
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied microbiology
Research InstitutionTottori University (2014-2015)
Kyushu University (2013)

Principal Investigator

Suzuki Hirokazu  鳥取大学, 工学(系)研究科(研究院), 准教授 (80462696)

Co-Investigator(Renkei-kenkyūsha) Morono Yuki  海洋研究開発機構, 高知コア研究所, サブリーダー (30421845)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2015: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2013: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywordsジオバチラス / 活性スクリーニング / 好熱菌 / ゲノムライブラリー / 高温機能性 / 宿主ベクター系
Outline of Final Research Achievements

This study aimed at facile construction of thermophile DNA libraries in thermophiles and efficient identification of thermostable enzyme genes via in vivo functional screening of the libraries. We established an efficient method to construct DNA libraries in the thermophile Geobacillus kaustophilus MK244, which lacks DNA restriction-modification systems. This method can be used to construct DNA libraries of some thermophiles and to identify the genes for orotidine-5′-phosphate decarboxylase via in vivo functional screening. We also examined functional screening for other enzyme genes but obtained false positives, probably due to instability of the cloning vector pUCG18T. Thus, we developed new host-vector systems and successfully identified Geobacillus spp. OS27, which can maintain the plasmid pUCG18T with higher copy numbers and higher stabilities than G. kaustophilus. This system may be further practical in constructing DNA libraries and identifying thermophile genes.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (18 results)

All 2016 2015 2014 2013

All Journal Article (6 results) (of which Peer Reviewed: 6 results,  Acknowledgement Compliant: 4 results) Presentation (12 results) (of which Invited: 1 results)

  • [Journal Article] Conjugative plasmid transfer from Escherichia coli is a versatile approach for genetic transformation of thermophilic Bacillus and Geobacillus species2016

    • Author(s)
      Yurie Tominaga, Takashi Ohshiro, Hirokazu Suzuki
    • Journal Title

      Extremophiles

      Volume: 20 Issue: 3 Pages: 375-381

    • DOI

      10.1007/s00792-016-0819-9

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A thiostrepton resistance gene and its mutants serve as selectable markers in Geobacillus kaustophilus HTA4262016

    • Author(s)
      Keisuke Wada, Jyumpei Kobayashi, Megumi Furukawa, Katsumi Doi, Takashi Ohshiro, Hirokazu Suzuki
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 80 Issue: 2 Pages: 368-375

    • DOI

      10.1080/09168451.2015.1079478

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Unique plasmids generated via pUC replicon mutagenesis in an error-prone thermophile derived from Geobacillus kaustophilus HTA4262015

    • Author(s)
      Jyumpei Kobayashi, Misaki Tanabiki, Shohei Doi, Akihiko Kondo, Takashi Ohshiro, Hirokazu Suzuki
    • Journal Title

      Appled and Environmental Microbiology

      Volume: 81 Issue: 21 Pages: 7625-7632

    • DOI

      10.1128/aem.01574-15

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Thermoadaptation-directed evolution of chloramphenicol acetyltransferase in an error-prone thermophile using improved procedures.2015

    • Author(s)
      Jyumpei Kobayashi, Megumi Furukawa, Takashi Ohshiro, and Hirokazu Suzuki.
    • Journal Title

      Applied Microbiology and Biotechnology

      Volume: in press Issue: 13 Pages: 5563-5572

    • DOI

      10.1007/s00253-015-6522-4

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Generation of chloramphenicol resistance plasmids functional at high temperatures by using an error-prone thermophile2014

    • Author(s)
      Jyumpei Kobayashi, Misaki Tanabiki, Megumi Furukawa, Hisashi Yagi, Takashi Ohshiro, Hirokazu Suzuki
    • Journal Title

      Conference Proceedings of International Biotechnology, Chemical Engineering and Life Science Conference 2014 (IBCELC)

      Volume: 1 Pages: 66-73

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] A Ternary Conjugation System for the Construction of DNA Libraries for <i>Geobacillus kaustophilus</i> HTA4262013

    • Author(s)
      H. Suzuki, K. Wada, M. Furukawa, K. Doi and T. Ohshima
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 77 Issue: 11 Pages: 2316-2318

    • DOI

      10.1271/bbb.130492

    • NAID

      130003381932

    • ISSN
      0916-8451, 1347-6947
    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] 好熱菌細胞を利用した進化工学が導く意外な遺伝子機能2016

    • Author(s)
      鈴木 宏和
    • Organizer
      国立大学法人九州大学 創立百周年記念 公益財団法人発酵研究所助成寄附講座最終成果報告会
    • Place of Presentation
      九州大学箱崎キャンパス(博多)
    • Year and Date
      2016-03-08
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 新たな好熱菌細胞工場を志向したGeobacillus kaustophilus HTA426のプラスミドキュアリングと影響評価2016

    • Author(s)
      水野 樹,八木 寿梓,大城 隆,鈴木 宏和
    • Organizer
      2015年度 日本農芸化学会中四国支部第44回講演会(例会)
    • Place of Presentation
      岡山県立大学(岡山)
    • Year and Date
      2016-01-23
    • Related Report
      2015 Annual Research Report
  • [Presentation] 海藻多糖類を資化する好熱菌の単離2015

    • Author(s)
      鈴木 宏和,奥中 淳平,藤井 健太,八木 寿梓,大城 隆
    • Organizer
      2015年度日本生物工学会
    • Place of Presentation
      城山観光ホテル(鹿児島)
    • Year and Date
      2015-10-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] 好熱菌細胞内変異で創出された変異型pUCレプリコンの大腸菌内特性2015

    • Author(s)
      田靡 実咲,小林淳平,八木 寿梓,大城 隆,鈴木 宏和
    • Organizer
      2015年度 日本農芸化学会中四国支部第42回講演会(例会)
    • Place of Presentation
      鳥取大学鳥取キャンパス(鳥取)
    • Year and Date
      2015-06-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] 好熱性バチラス属細菌へのプラスミド導入における接合伝達法の汎用性2015

    • Author(s)
      冨永 有里絵,八木 寿梓,大城 隆,鈴木 宏和
    • Organizer
      2015年度 日本農芸化学会中四国支部第42回講演会(例会)
    • Place of Presentation
      鳥取大学鳥取キャンパス(鳥取)
    • Year and Date
      2015-06-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] 好熱菌Geobacillus kaustophilus HTA426が有する大型プラスミドpHTA426の遺伝学的解析2015

    • Author(s)
      水野 樹,八木 寿梓,大城 隆,鈴木 宏和
    • Organizer
      2015年度 日本農芸化学会中四国支部第42回講演会(例会)
    • Place of Presentation
      鳥取大学鳥取キャンパス(鳥取)
    • Year and Date
      2015-06-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] Geobacillus kaustophilus HTA426高変異性株を利用した耐熱化変異酵素遺伝子の創出法2015

    • Author(s)
      鈴木 宏和,小林 淳平,古川 恵,八木 寿梓,大城 隆
    • Organizer
      2015年度 日本農芸化学会年会
    • Place of Presentation
      岡山(岡山大学)
    • Year and Date
      2015-03-27
    • Related Report
      2014 Research-status Report
  • [Presentation] Geobacillus kaustophilus HTA426高変異性株で派生した高温機能型クロラムフェニコール耐性プラスミドの解析2015

    • Author(s)
      小林 淳平,田靡 実咲,土井 奨平,古川 恵,八木 寿梓,大城 隆,鈴木 宏和
    • Organizer
      2015年度 日本農芸化学会年会
    • Place of Presentation
      岡山(岡山大学)
    • Year and Date
      2015-03-27
    • Related Report
      2014 Research-status Report
  • [Presentation] Geobacillus kaustophilus HTA426で機能するチオストレプトン耐性マーカーの創出2015

    • Author(s)
      和田 圭介,小林 淳平,古川 恵,土居 克実,八木 寿梓,大城 隆,鈴木 宏和
    • Organizer
      2015年度 日本農芸化学会年会
    • Place of Presentation
      岡山(岡山大学)
    • Year and Date
      2015-03-27
    • Related Report
      2014 Research-status Report
  • [Presentation] 好熱菌Geobacillus kaustophilus HTA426に高温下クロラムフェニコ-ル耐性を付与する変異プラスミド2014

    • Author(s)
      鈴木 宏和,小林 淳平,田靡 実咲,古川 恵,八木 寿梓,大城 隆
    • Organizer
      2014年度 日本生物工学会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2014-09-10
    • Related Report
      2014 Research-status Report
  • [Presentation] Generation of chloramphenicol resistance plasmids functional at high temperatures by using an error-prone thermophile2014

    • Author(s)
      Jyumpei Kobayashi, Misaki Tanabiki, Megumi Furukawa, Hisashi Yagi, Takashi Ohshiro, Hirokazu Suzuki
    • Organizer
      2014 International Biotechnology, Chemical Engineering and Life Science Conference (IBCELC), Okinawa, Japan
    • Place of Presentation
      Okinawa, Japan
    • Year and Date
      2014-09-04
    • Related Report
      2014 Research-status Report
  • [Presentation] 三者接合法によるGeobacillus kaustophilus HTA426への高効率プラスミド導入2013

    • Author(s)
      鈴木 宏和, 和田 圭介, 古川 恵, 土居 克己, 大島 敏久
    • Organizer
      2013年度 日本生物工学会
    • Place of Presentation
      広島国際会議場
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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