• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Design of non-peptide inhibitors based on structure analyses of the protease/inhibitor complex

Research Project

Project/Area Number 25460160
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Drug development chemistry
Research InstitutionKyoto Pharmaceutical University

Principal Investigator

Akaji Kenichi  京都薬科大学, 薬学部, 教授 (60142296)

Co-Investigator(Renkei-kenkyūsha) HATTORI Yasunao  京都薬科大学, 薬学部, 助教 (20567028)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2015: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2013: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywordsプロテアーゼ / 阻害剤 / 疎水性相互作用 / 複合体構造解析 / 縮環構造 / 創薬科学 / 医薬品化学 / プロテアーゼ阻害剤 / SARS / BACE1
Outline of Final Research Achievements

Evaluation of a novel decahydroisoquinolin scaffold as an inhibitor for severe acute respiratory syndrome (SARS) chymotrypsin-like protease (3CLpro) was achieved. Focusing on hydrophobic interactions at the S2 site, the decahydroisoquinolin scaffold was designed by connecting the P2 site group to the main-chain nitrogen atom of the P2 position via a methylene linker. All decahydroisoquinolin inhibitors synthesized showed moderate but clear inhibitory activities for SARS 3CLpro, which confirmed the fused ring structure functions as a novel scaffold for SARS 3CLpro inhibitor.
Hydroxyethylamine (HEA) isostere, as a transition state mimic, was incorporated into macro-cyclic structures connecting the P2 and P4 site of the substrate sequence of BACE1, a key protease for the onset of Alzheimer diseases. Synthesized cyclic inhibitor showed moderate but clear inhibitory activity for BACE1, which confirmed the ring structure functions as a novel scaffold for BACE1 inhibitor.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (17 results)

All 2015 2014 2013 Other

All Journal Article (11 results) (of which Peer Reviewed: 11 results) Presentation (3 results) (of which Int'l Joint Research: 1 results,  Invited: 1 results) Book (1 results) Remarks (2 results)

  • [Journal Article] Synthesis of a pyrrolidine analog of a tetrahydrofuran containing acetogenin, cis-solamin2015

    • Author(s)
      Ohnishi K, Sakurai H, Katsuyama M, Kobayashi K, Makabe H, Teruya K, Akaji K, Hattori Y.
    • Journal Title

      HETEROCYCLES

      Volume: 91 Issue: 3 Pages: 573-582

    • DOI

      10.3987/com-14-13163

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Fused-ring structure of decahydroisoquinolin as a novel scaffold for SARS 3CL protease inhibitors2015

    • Author(s)
      Shimamoto Y, Hattori Y, Kobayashi K, Teruya K, Sanjho A, Nakagawa A, Yamashita E, Akaji K.
    • Journal Title

      Bioorganic and Medicinal Chemistry

      Volume: 23 Issue: 4 Pages: 876-890

    • DOI

      10.1016/j.bmc.2014.12.028

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evaluation of transition-state mimics in a superior BACE1 cleavage sequence as peptide-mimetic BACE1 inhibitors2015

    • Author(s)
      Hattori Y, Kobayashi K, Deguchi A, Nohara Y, Akiyama T, Teruya K, Sanjoh A, Nakagawa A, Yamashita E, Akaji K
    • Journal Title

      Bioorganic and Medicinal Chemistry

      Volume: 23 Issue: 17 Pages: 5626-5640

    • DOI

      10.1016/j.bmc.2015.07.023

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Synthesis and evaluation of inhibitory activity of the curcumin derivatives toward the inhibitor of beta-site amyloid precursor protein cleaving enzyme 1.2014

    • Author(s)
      Konno, H.; Endo, H.; Ise, S.; Miyazaki, K.; Aoki, H.; Sanjo, A.; Hattori, Y.; Akaji, K.
    • Journal Title

      Bioorg. Med. Chem. Lett.

      Volume: 24 Issue: 2 Pages: 685-690

    • DOI

      10.1016/j.bmcl.2013.11.039

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Synthesis of an O-acyl isopeptide by using native chemical ligation in an aqueous solvent system.2014

    • Author(s)
      川島 浩之
    • Journal Title

      Journal of Peptide Science

      Volume: 20 Issue: 5 Pages: 361-365

    • DOI

      10.1002/psc.2622

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Effect of prome-site sequence of retro-inverso-modified HTLV-1 protease inhibitor.2014

    • Author(s)
      Awahara, C.; Tatsumi, T.; Furuta, S.; Shinjoh, G.; Konno, H.; Nosaka, K.; Kobayashi, K.; Hattori, Y.; Akaji, K.
    • Journal Title

      Bioorg. Med. Chem.

      Volume: 22 Issue: 8 Pages: 2482-2488

    • DOI

      10.1016/j.bmc.2014.02.050

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Chemical Dynamic Kinetic Resolution and S/R Interconversion of Unprotected α-Amino Acids2014

    • Author(s)
      Takeda, R.; Kawamura, A.; Kawashima, A.; Sato, T.; Moriwaki, H.; Izawa, K.; Akaji, K.; Wang, S.; Liu, H.; Acena, J. L.; Soloshonok, V. A.
    • Journal Title

      Angew. Chem. Int. Ed.

      Volume: 53 Issue: 45 Pages: 12214-12217

    • DOI

      10.1002/anie.201407944

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Design, synthesis, and biological evaluation of novel dipeptide-type SARS-CoV 3CL protease inhibitors: Structure–activity relationship study2013

    • Author(s)
      Pillaiyar Thanigaimalai
    • Journal Title

      European Journal of Medicinal Chemistry

      Volume: in press Pages: 999-999

    • DOI

      10.1016/j.ejmech.2013.05.005

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Design and synthesis of new tripeptide-type SARS-CoV 3CL protease inhibitors containing an electrophilic arylketone moiety2013

    • Author(s)
      S. Konno, P. Thanigaimalai, Shen-En Chen, Ernesto Freire, Y. Hayashi, 他9名
    • Journal Title

      Bioorganic & Medicinal Chemistry

      Volume: 21 Issue: 2 Pages: 412-424

    • DOI

      10.1016/j.bmc.2012.11.017

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Practical synthesis of peptide C-terminal aldehyde on a solid support2013

    • Author(s)
      Konno, H.; Sema, Y.; Ishii, M.; Hattori, Y.; Nosaka, K.; Akaji, K.
    • Journal Title

      Tetrahedron Lett.

      Volume: 54 Issue: 36 Pages: 4848-4850

    • DOI

      10.1016/j.tetlet.2013.06.103

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Development of potent dipeptide-type SARS-CoV 3CL protease inhibitors with novel P3 scaffolds: Design, synthesis, biological evaluation, and docking studies2013

    • Author(s)
      Thanigaimalai, P.; Konno, S.; Yamamoto, T.; Koiwai, Y.; Taguchi, A.; Takayama, K.; Yakushiji, F.; Akaji, K.; Chen, S.-E.;Naser-Tavakolian, A.; Schon, A.; Freire, E.; Hayashi, Y.
    • Journal Title

      Eur. J. Med. Chem.

      Volume: 68 Pages: 372-384

    • DOI

      10.1016/j.ejmech.2013.07.037

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] Evaluation of Hydroxymethylcarbonyl and Hydroxyethylamine Isosteres in a Superior BACE1 Cleavage Sequence for BACE1 Inhibitors2015

    • Author(s)
      Kazuya Kobayashi, Yasunao Hattori, Ayaka Deguchi, Yukie Nohara, Tomomi Akiyama, Kenta Teruya, Akira Sanjoh, Atsushi Nakagawa, Eiki Yamashita, Kenichi Akaji
    • Organizer
      7th International Peptide Symposium
    • Place of Presentation
      Singapore
    • Year and Date
      2015-12-09
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Dアミノ酸を利用した阻害剤設計2014

    • Author(s)
      赤路 健一
    • Organizer
      2014年度 創薬科学フロンティアシンポジウム
    • Place of Presentation
      京都
    • Year and Date
      2014-11-22 – 2014-11-23
    • Related Report
      2014 Research-status Report
  • [Presentation] プロテアーゼの基質認識に基づく阻害剤設計

    • Author(s)
      赤路 健一
    • Organizer
      第19回ペプチドフォーラム
    • Place of Presentation
      山形大学工学部百周年記念会館(山形県米沢市)
    • Related Report
      2013 Research-status Report
    • Invited
  • [Book] 遺伝子医学MOOK別冊 次世代ペプチド医薬創製2014

    • Author(s)
      赤路健一・編著
    • Total Pages
      131
    • Publisher
      メディカルドゥ
    • Related Report
      2014 Research-status Report
  • [Remarks] 京都薬科大学・薬品化学分野・ホームページ

    • URL

      http://labo.kyoto-phu.ac.jp/yakuhin/index.html

    • Related Report
      2015 Annual Research Report 2014 Research-status Report
  • [Remarks] 京都薬科大学・薬品化学分野・ホームページ

    • URL

      http://labo.kyoto-phu.ac.jp/yakuhin/index.html

    • Related Report
      2013 Research-status Report

URL: 

Published: 2014-07-25   Modified: 2019-07-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi