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The comprehensive analysis of microRNA using next generation sequencer (NGS) for forensic application

Research Project

Project/Area Number 25460860
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Legal medicine
Research InstitutionKansai Medical University

Principal Investigator

HASHIYADA Masaki  関西医科大学, 医学部, 准教授 (40374938)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2014: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2013: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
KeywordsマイクロRNA / ラット / 次世代シークエンサー / 死後のストレスマーカー / 死後経過時間推定 / microRNA / 死後経過時間 / TaqMan法
Outline of Final Research Achievements

The microRNAs (miRNAs) are known to be stable at postmortem because they are short-length (about 20 nucleotides) single-strand molecules. In this study, we searched miRNAs acting as biological markers to estimate the time since death or the level of stress before death by experiments using rats. Then the good correlations were observed between the postmortem time and levels of instable cytoplasmic RNAs, when miR-16 in heart, miR-21 in liver and miR-451 in blood were used as internal standards. In addition, miRNAs in rats under stresses of alcohol intake, running and suppression by water bag were analyzed by the next generation sequencer, levels of several miRNAs were found to be increased or decreased by the stresses.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (17 results)

All 2015 2014 2013

All Journal Article (6 results) (of which Peer Reviewed: 6 results,  Acknowledgement Compliant: 1 results) Presentation (11 results) (of which Int'l Joint Research: 1 results,  Invited: 1 results)

  • [Journal Article] The comprehensive analysis of microRNA in hearts of stress model rat.2015

    • Author(s)
      Masaki Hashiyada, Tadashi Hosoya, Atsushi Akane, Tomohiro Matsumoto, Sumitaka Yoshimura, Takuma Tokiyasu, Masato Funayama.
    • Journal Title

      Forensic Science International: Genetics Supplement Series

      Volume: 5 Pages: e557-e558

    • DOI

      10.1016/j.fsigss.2015.09.220

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] 死後経過時間に伴うラット血中micro RNA (miRNA) の挙動.2015

    • Author(s)
      橋谷田真樹, 赤根敦, 吉田学, 吉村澄孝, 時安太久磨, 細谷直, 舟山眞人.
    • Journal Title

      DNA多型

      Volume: 23 Pages: 169-170

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 食餌性イレウスを引き起こした原因物質のDNAバーコードによる同定.2015

    • Author(s)
      橋谷田真樹, 赤根敦, 松本智寛, 吉村澄孝, 時安太久磨, 松井俊樹, 那谷雅之.
    • Journal Title

      法医学の実際と研究

      Volume: 58 Pages: 155-159

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 異同識別におけるY-STR一致の意味とその評価.2015

    • Author(s)
      橋谷田真樹, 赤根敦, 吉田学, 吉村澄孝, 時安太久磨, 真鍋翔, 玉木敬二.
    • Journal Title

      DNA鑑定

      Volume: 7 Pages: 19-25

    • NAID

      40020708402

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 合成カンナビノイド中毒と交通事故.2015

    • Author(s)
      松本智寛, 橋谷田真樹, 赤根敦.
    • Journal Title

      中毒研究

      Volume: 28 Pages: 333-338

    • NAID

      40020680915

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 2.死後経過時間推定マーカーとしてのmicroRNA(miRNA)の評価2014

    • Author(s)
      橋谷田真樹,臼井聖尊,大内 司,林崎義映,細谷 直,池田知哉,猪狩 由,荒牧友美,境 純,舟山眞人.
    • Journal Title

      DNA多型

      Volume: 22 Pages: 178-180

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Presentation] 法遺伝学における最近のトピック2015

    • Author(s)
      橋谷田真樹
    • Organizer
      DNA鑑定学会第8回大会
    • Place of Presentation
      発明会館,東京
    • Year and Date
      2015-12-09
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] ストレスモデルラットにおけるmicroRNA(miRNA)の発現変化.2015

    • Author(s)
      橋谷田真樹, 赤根敦, 松本智寛, 吉村澄孝, 時安太久磨, 細谷直, 舟山眞人.
    • Organizer
      日本DNA多型学会第24回学術集会
    • Place of Presentation
      岡山大学創立五十周年記念館,岡山
    • Year and Date
      2015-11-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] The comprehensive analysis of microRNA in hearts of stress model rat.2015

    • Author(s)
      Masaki Hashiyada, Tadashi Hosoya, Atsushi Akane, Tomohiro Matsumoto, Sumitaka Yoshimura, Takuma Tokiyasu, Masato Funayam
    • Organizer
      The final Annual Meeting of Molecular Imaging Center of Diseases
    • Place of Presentation
      Kansai Medical University, HIrakata, Japan.
    • Year and Date
      2015-11-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] The comprehensive analysis of microRNA in hearts of stress model rat.2015

    • Author(s)
      Masaki Hashiyada, Tadashi Hosoya, Atsushi Akane, Tomohiro Matsumoto, Sumitaka Yoshimura, Takuma Tokiyasu, Masato Funayam
    • Organizer
      26th Congress of the International Society for Forensic Genetics
    • Place of Presentation
      The Auditorium Maximum of the Jagiellonian University, Krakow, Poland.
    • Year and Date
      2015-09-01
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 次世代シークエンサー(Ion PGM^TM)の物体鑑定への応用.2015

    • Author(s)
      橋谷田真樹, 赤根敦, 吉田学, 松本智寛.
    • Organizer
      第99次日本法医学会学術全国集会
    • Place of Presentation
      高知市文化プラザ かるぽーと,高知
    • Year and Date
      2015-06-10
    • Related Report
      2015 Annual Research Report
  • [Presentation] 死亡直前のCT検査で診断された硬膜下血腫が認められなかった剖検例.2015

    • Author(s)
      赤根敦, 橋谷田真樹, 松本智寛, 吉村澄孝, 時安太久磨, 吉田学.
    • Organizer
      第99次日本法医学会学術全国集会
    • Place of Presentation
      高知市文化プラザ かるぽーと,高知
    • Year and Date
      2015-06-10
    • Related Report
      2015 Annual Research Report
  • [Presentation] ギ酸アンモニウム,酢酸アンモニウムを用いた親水性有機溶媒の二相分離液-液抽出法の検討.2015

    • Author(s)
      吉田学, 赤根敦, 松本智寛, 時安太久磨, 吉村澄孝, 橋谷田真樹.
    • Organizer
      第99次日本法医学会学術全国集会
    • Place of Presentation
      高知市文化プラザ かるぽーと,高知
    • Year and Date
      2015-06-10
    • Related Report
      2015 Annual Research Report
  • [Presentation] 死後経過時間に伴うラット血中micro RNA(miRNA)の挙動2014

    • Author(s)
      橋谷田真樹,赤根 敦,吉田 学,吉村澄孝,時安太久磨,細谷 直,舟山眞人
    • Organizer
      日本DNA多型学会第22回学術集会
    • Place of Presentation
      愛知県産業労働センター ウインクあいち,名古屋
    • Year and Date
      2014-11-27 – 2014-11-28
    • Related Report
      2014 Research-status Report
  • [Presentation] Acute physical and restraint stress increases miR-16 expression in rat hearts2014

    • Author(s)
      Tadashi Hosoya, Tomomi Aramaki, Tomoya Ikeda, Yui Igari, Yoshie Hayashizaki, Tsukasa Ohuchi, Kiyotaka Usui, Masaki Hashiyada, Masato Funayama
    • Organizer
      International Symposium on Advances in Legal Medicine
    • Place of Presentation
      Fukuoka International Congress Center, Fukuoka
    • Year and Date
      2014-06-16 – 2014-06-20
    • Related Report
      2014 Research-status Report
  • [Presentation] 興奮性譫妄をモデル化したストレス環境下におけるラット全血のmicroRNA(miRNA)の挙動2013

    • Author(s)
      細谷直,猪狩由,林崎義映,境純,臼井聖尊,橋谷田真樹,舟山眞人
    • Organizer
      第97次日本法医学会学術全国集会
    • Place of Presentation
      ロイトン札幌
    • Related Report
      2013 Research-status Report
  • [Presentation] 死後経過時間推定マーカーとしてのmicroRNA(miRNA)の評価2013

    • Author(s)
      橋谷田真樹,臼井聖尊,大内司,林崎義映,細谷直,池田知哉,猪狩由,荒巻友美,境純,舟山眞人
    • Organizer
      日本DNA多型学会第22回学術集会
    • Place of Presentation
      仙台市立戦災復興記念館
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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