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Determination of cellular factors involved in chikungunya virus infection

Research Project

Project/Area Number 25461510
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Infectious disease medicine
Research InstitutionOsaka University

Principal Investigator

Tanaka Atsushi  大阪大学, 微生物病研究所, 特任講師(常勤) (20321953)

Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2013: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywordschikungunya virus / heparan sulfate / チクングニアウイルス / へパラン硫酸 / シュードタイプウイルス
Outline of Final Research Achievements

The molecular mechanisms underlying chikungunya virus (CHIKV) infection are poorly characterized. In this study, we analyzed the host factors involved in CHIKV infection using genome-wide screening. Human haploid HAP1 cells, into which an exon-trapping vector was introduced, were challenged with a pseudotyped vesicular stomatitis virus expressing the CHIKV-E envelope proteins. The genes inserted with the exon-trapping vector were identified using a next-generation sequencer. By the comparison of collected cell pool with control one, specifically enriched genes in the mutant cell pool were selected as candidate genes involved in CHIKV infection. We identified several genes functioning in the heparan sulfate (HS) biosynthesis pathway, and found that the N-sulfation of the glucosamine residue of HS, catalyzed by NDST1 is essential for efficient binding of CHIKV to target cells.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (6 results)

All 2016 2015 2014

All Presentation (6 results) (of which Int'l Joint Research: 1 results)

  • [Presentation] Minimum heparan sulfate structure for chikungunya virus binding and infection to the target cells2016

    • Author(s)
      田中淳
    • Organizer
      第64回日本ウイルス学会学術集会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2016-10-23
    • Related Report
      2016 Annual Research Report
  • [Presentation] チクングニアウイルス感染関連遺伝子の網羅的同定2015

    • Author(s)
      Atsushi Tanaka, Shota Nakamura, Uranan Tumkosit, Daisuke Motooka, Naokazu Takeda, Yusuke Maeda
    • Organizer
      BMB2015(第38回日本分子生物学会年会 第88回日本生化学会大会 合同大会)
    • Place of Presentation
      神戸国際展示場
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report
  • [Presentation] Genome-wide screening of genes involved in Chikungunya virus infection2015

    • Author(s)
      Yusuke Maeda, Shota Nakamura, Daisuke Motooka, Uranan Tumkosit, Shigeyuki Hamada, Taroh Kinoshita, Naokazu Takeda1, Atsushi Tanaka
    • Organizer
      The 14th Awaji International Forum on Infection and Immunity
    • Place of Presentation
      淡路夢舞台国際会議場
    • Year and Date
      2015-09-08
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] キリングアッセイによるチクングニアウイルス感染関連細胞性因子の探索 (Challenges in probing cellular factors for chikungunya virus infection by killing assay)2014

    • Author(s)
      Atsushi Tanaka, Uranan Tumkosit, Sumalee Chanama, Atchareeya A-nuegoonpipat, Pornsiri Somasa, Naokazu Takeda, Areerat Sa-ngasang
    • Organizer
      第62回日本ウイルス学会学術集会
    • Place of Presentation
      パシフィコ横浜 会議センター
    • Year and Date
      2014-11-10 – 2014-11-12
    • Related Report
      2014 Research-status Report
  • [Presentation] Challenges in probing cellular factors for chikungunya virus replication2014

    • Author(s)
      Atsushi Tanaka, Uranan Tumkosit, Sumalee Chanama, Atchareeya A-nuegoonpipat, Pornsiri Somasa, Naokazu Takeda, Areerat Sa-ngasang
    • Organizer
      International Union of Microbiological Societies Congresses
    • Place of Presentation
      MONTREAL, CANADA
    • Year and Date
      2014-07-27 – 2014-08-01
    • Related Report
      2014 Research-status Report
  • [Presentation] Determination of the cellular factors affecting to the chikungunya virus propagation2014

    • Author(s)
      田中 淳
    • Organizer
      アジア・アフリカリサーチフォーラム 2014
    • Place of Presentation
      仙台
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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