• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Identification of novel prognostic markers for glioblastomas by means of next-generation sequencing-ased targeted resequencing

Research Project

Project/Area Number 25462283
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Neurosurgery
Research InstitutionNational Cancer Center Japan (2015)
National Center of Neurology and Psychiatry (2013)

Principal Investigator

ICHIMURA Koichi  国立研究開発法人国立がん研究センター, その他部局等, 分野長 (40231146)

Co-Investigator(Renkei-kenkyūsha) USHIJIMA Toshikazu  国立がん研究センター, エピゲノム解析分野, 分野長 (90232818)
NARITA Yoshitaka  国立がん研究センター, 脳脊髄腫瘍科, 科長 (40392344)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2015: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2013: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywords脳腫瘍 / 遺伝子変異 / 次世代シークエンス / 膠芽腫 / 分子分類 / TERT / グリオーマ / Ion Torrent / 遺伝子診断 / マイクロアレイ / CGH / IonTorrent
Outline of Final Research Achievements

Glioblastomas are the most common and malignant brain tumors. For molecular classification of gliomas, we established a series of robust assays to screen IDH mutations, TERT promoter mutations, 1p/19q codeletion and MGMT methylation. Using these assays, a total of 951 adult gliomas including 453 glioblastomas collected through a multi-center collaboration were studied. We found that a molecular classification by a combination of IDH mutation and TERT mutation was strongly associated with prognosis of the glioma patients. In addition, we found that a significant interaction between TERT mutation and MGMT methylation was associated with prognosis of glioblastomas and that the combination of these alterations could serve as a useful prognostic marker. We have also established a Glioma Mutation Screening Panel for 93 genes known to be frequently mutated in gliomas. Using this panel, we are screening glioblastomas for mutations to identify a novel prognostic marker(s).

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (17 results)

All 2016 2015 2014 2013 Other

All Journal Article (5 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 5 results) Presentation (11 results) (of which Int'l Joint Research: 1 results,  Invited: 9 results) Remarks (1 results)

  • [Journal Article] Glioblastomas with IDH1/2 mutations have a short clinical history and have a favourable clinical outcome2016

    • Author(s)
      Ohno M, Narita Y, Miyakita Y, Matsushita Y, Arita H, Yonezawa M, Yoshida A, Fukushima S, Takami H, Ichimura K, Shibui S
    • Journal Title

      Japanese Journal of Clinical Oncology

      Volume: 46 Issue: 1 Pages: 31-39

    • DOI

      10.1093/jjco/hyv170

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Diffusely infiltrating astrocytomas: pathology, molecular mechanisms and markers.2015

    • Author(s)
      Ichimura K, Narita Y, Hawkins CE
    • Journal Title

      Acta Neuropathologica

      Volume: 129 Issue: 6 Pages: 789-808

    • DOI

      10.1007/s00401-015-1439-7

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Development of a robust and sensitive pyrosequencing assay for the detection of IDH1/2 mutations in gliomas2014

    • Author(s)
      Arita H, Narita Y, Matsushita Y, Fukushima S, Yoshida A, Takami H, Miyakita Y, Ohno M, Shibui S, Ichimura K
    • Journal Title

      Brain Tumor Pathology

      Volume: ePub Issue: 1 Pages: 22-30

    • DOI

      10.1007/s10014-014-0186-0

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] TERT promoter mutations rather than methylation are the main mechanism for TERT upregulation in adult gliomas.2013

    • Author(s)
      Arita H, Narita Y, Takami H, Fukushima S, Matsushita Y, Yoshida A, Miyakita Y, Ohno M, Shibui S, Ichimura K.
    • Journal Title

      Acta Neuropathol.

      Volume: 126 Issue: 6 Pages: 939-941

    • DOI

      10.1007/s00401-013-1203-9

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Upregulating mutations in the TERT promoter commonly occur in adult malignant gliomas and are strongly associated with total 1p19q loss.2013

    • Author(s)
      Arita H, Narita Y, Fukushima S, Tateishi K, Matsushita Y, Yoshida A, Miyakita Y, Ohno M, Collins VP, Kawahara N, Shibui S, Ichimura K.
    • Journal Title

      Acta Neuropathol.

      Volume: 126 Issue: 2 Pages: 267-276

    • DOI

      10.1007/s00401-013-1141-6

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] IDHとTERTによる成人神経膠腫の分子分類2015

    • Author(s)
      有田英之、市村幸一、他
    • Organizer
      第33回日本脳腫瘍学会
    • Place of Presentation
      グラントプリンスホテル京都、京都府
    • Year and Date
      2015-12-06
    • Related Report
      2015 Annual Research Report
  • [Presentation] Molecular classification based on IDH1/2 and TERT promoter well-defines subgroups with different outcome in adult diffuse gliomas2015

    • Author(s)
      有田英之、市村幸一、他
    • Organizer
      The 20th Annual Meeting and Education Day of the Society for Neuro-Oncology
    • Place of Presentation
      Marriott Rivercenter, San Antonio, USA
    • Year and Date
      2015-11-19
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] グリオーマにおけるIDH変異の意義2015

    • Author(s)
      市村幸一
    • Organizer
      第74回日本癌学会学術総会
    • Place of Presentation
      名古屋国際会議場、愛知県
    • Year and Date
      2015-10-08
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 成人グリオーマの分子マーカーと Bevacizumab感受性予測因子2015

    • Author(s)
      市村幸一
    • Organizer
      第16回日本分子脳神経外科学会
    • Place of Presentation
      アクトシティ浜松コングレスセンター、静岡県
    • Year and Date
      2015-08-28
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 成人グリオーマの新しいWHO分類における分子診断の意義2015

    • Author(s)
      市村幸一
    • Organizer
      第33回日本脳腫瘍病理学会
    • Place of Presentation
      JRホテルクレメント高松、香川県
    • Year and Date
      2015-05-29
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 遺伝子変異から見た神経膠腫の発生機序2013

    • Author(s)
      市村幸一
    • Organizer
      第33回日本脳神経外科コングレス総会
    • Place of Presentation
      大阪国際会議場
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] グリオーマの診断における分子遺伝学の役割2013

    • Author(s)
      市村幸一
    • Organizer
      第102回日本病理学会総会
    • Place of Presentation
      ロイトン札幌
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Molecular pathogenesis of IDH mutations in gliomas2013

    • Author(s)
      市村幸一
    • Organizer
      日本癌学会総会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] 成人神経膠腫における分子分類の可能性と課題2013

    • Author(s)
      市村幸一
    • Organizer
      日本脳神経外科学会総会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] 神経膠腫におけるIDH突然変異の意義2013

    • Author(s)
      市村幸一
    • Organizer
      第1回がんと代謝研究会
    • Place of Presentation
      慶應義塾大学先端生命科学研究所
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] 神経膠腫におけるIDH突然変異の意義2013

    • Author(s)
      市村幸一
    • Organizer
      第36回分子生物学会
    • Place of Presentation
      神戸ポートアイランド
    • Related Report
      2013 Research-status Report
    • Invited
  • [Remarks] 脳腫瘍連携研究分野

    • URL

      http://www.ncc.go.jp/jp/nccri/divisions/brain_tumor/index.html

    • Related Report
      2013 Research-status Report

URL: 

Published: 2014-07-25   Modified: 2019-07-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi