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Conprehensive analysis of deafness genes in families in Okinawa islands

Research Project

Project/Area Number 25462649
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Otorhinolaryngology
Research InstitutionUniversity of the Ryukyus

Principal Investigator

GANAHA AKIRA  琉球大学, 医学部附属病院, 講師 (00347155)

Co-Investigator(Kenkyū-buntansha) KANAME TADASHI  国立成育医療研究センター, ゲノム医療研究部, 部長 (40264288)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2013: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords遺伝性難聴 / 遺伝子解析 / 次世代シークエンサー / 沖縄 / 難聴遺伝子 / 次世代シーケンサ
Outline of Final Research Achievements

In this study, a targeted next generation resequencing panel including 98 known hearing loss genes was used to identify the genetic etiology in patients with congenital or progressive hearing loss. 51 unrelated families with syndromic or non-syndromic hearingloss were recruited. In 25 of 51 hearing loss families we identified pathogenic mutations. Among these mutations, 14 were novel mutations. Mutations in SLC26A4 and SLC26A4 were frequent and important causes of hearing loss in Okinawa islands. Mutation detection rate of our study is 49%, indicating the usefulness of our targeted sequencing panel in Okinawa islands. The mutation in GJB2 was identified in one family. GJB2 was not most common causative gene for hearing loss in Okinawa. The present data suggeste a difference in the spectrum of causative genes for hearing loss among patients in Okinawa Islands compared with patients in the main lands Japan.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (3 results)

All 2016 2015 2013

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (2 results)

  • [Journal Article] Identification of two novel mutations in the NOG gene associated with congenital stapes ankylosis and symphalangism2015

    • Author(s)
      Ganaha A, Kaname T, et al.
    • Journal Title

      Journal of Human Genetics

      Volume: 60 Issue: 1 Pages: 27-34

    • DOI

      10.1038/jhg.2014.97

    • NAID

      40020330154

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Presentation] 沖縄県における難聴遺伝子解析2016

    • Author(s)
      我那覇 章 與那覇 綾乃 比嘉 輝之 近藤 俊輔 鈴木 幹男
    • Organizer
      第117回日本耳鼻咽喉科学会総会・学術講演会
    • Place of Presentation
      名古屋国際会議場(愛知県名古屋市)
    • Year and Date
      2016-05-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] 指骨癒合を認めた遺伝性伝音難聴における遺伝子解析2013

    • Author(s)
      我那覇 章
    • Organizer
      日本耳科学会
    • Place of Presentation
      宮崎シーガイアコンベンションセンター
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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