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Development of nonradioacitve method for measuring bacterial production rate in aquatic environments

Research Project

Project/Area Number 25550019
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Environmental dynamic analysis
Research InstitutionNational Institute for Environmental Studies

Principal Investigator

IMAI AKIO  独立行政法人国立環境研究所, 地域環境研究センター, 研究センター長 (40203286)

Co-Investigator(Kenkyū-buntansha) SANO Tomoharu  (独)国立環境研究所, 主任研究員 (10178808)
Co-Investigator(Renkei-kenkyūsha) KOMATSU Kazuhiro  (独)国立環境研究所, 主任研究員 (20391104)
TOMIOKA Noriko  (独)国立環境研究所, 主任研究員 (40168399)
Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2013: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords細菌生産速度測定法 / 非放射性同位体
Outline of Final Research Achievements

We developed a nonradioactive quantitative measurement of bacterial production using stable isotope nitrogen-15-labeled deoxyadenosine (15N-dA) by liquid chromatography mass spectrometry (LC-MS). The procedures of the 15N-dA method were the incubation of seawater with 15N-dA, the filtration onto a membrane filter, the DNA extraction, the enzymatic hydrolysis of DNA to nucleosides and the quantification of 15N-dA by LC-MS. Incorporation rate of 15N-dA was significantly positively correlated to that of tritium labeled thymidine (3H-TdR) in samples of coastal seawaters. Average 15N-dA : 3H-TdR incorporation ratio was 0.55 with 2.5% and 97.5% confidence intervals of 0.51 and 0.58, respectively. The results indicated that 15N-dA could accurately predict TdR incorporations over a wide range of bacterial production.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (5 results)

All 2015 2014 2013

All Presentation (5 results)

  • [Presentation] 放射性同位体を全く使用しないバクテリア生産量測定法の開発2015

    • Author(s)
      土屋健司、戸田龍樹、川崎伸之、佐野友春、冨岡典子、今井章雄、福田秀樹、浜崎恒二、多田雄哉、下出信次
    • Organizer
      第49回日本水環境学会
    • Place of Presentation
      金沢大学(金沢市)
    • Year and Date
      2015-03-16 – 2015-03-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] 相模湾真鶴港に優占するカイアシ類Acarita steueriの細菌生産への寄与2014

    • Author(s)
      中村賢一・土屋健司・Kam W. Tang・高橋一生・浜崎恒二・今井章雄・戸田龍樹
    • Organizer
      2014年日本海洋学会春季大会
    • Place of Presentation
      東京
    • Related Report
      2013 Research-status Report
  • [Presentation] 相模湾沿岸域における細菌へのボトムアップおよびトップダウン制御の季節変化2014

    • Author(s)
      菅井洋太・土屋健司・今井章雄・浜崎恒二・菊池知彦・戸田龍樹
    • Organizer
      2014年日本海洋学会春季大会
    • Place of Presentation
      東京
    • Related Report
      2013 Research-status Report
  • [Presentation] Typhoon-driven variations of phytoplankton and bacterial production in the coastal waters of Sagami Bay, Japan2013

    • Author(s)
      Tsuchiya K., Kuwahara V.S., Hmasakai Y., Tada Y., Imai A., Ichikawa T., Kikuchi T., Toda T.
    • Organizer
      Japan Geoscience Union Meeting 2013
    • Place of Presentation
      Chiba, Japan
    • Related Report
      2013 Research-status Report
  • [Presentation] Typhoon-induced primary production and microbial processes below the euphotic layer in temperate coastal waters, Japan2013

    • Author(s)
      Tsuchiya K. Kawahara V.S., Hamasaki Y., Tada A., Imai A., Kikuchi T., Toda T.
    • Organizer
      ECSAte and Ocean & Coastal Management
    • Place of Presentation
      Shanghai, China
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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