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Analysis of molecular network on maintenance and differentiation of glioma stem cells

Research Project

Project/Area Number 25640068
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Tumor biology
Research InstitutionKumamoto University

Principal Investigator

ARAKI Norie  熊本大学, その他の研究科, 准教授 (80253722)

Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2013: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywordsがん幹細胞 / プロテオミクス / 分子治療標的 / グリオーマ幹細胞 / 融合プロテオミクス / mTOR / 幹細胞
Outline of Final Research Achievements

To identify the molecular network regulating the maintenance/differentiation of glioma stem cells (GSCs), we established 9 clones from patient’s gliomas having the potential to form glioblastomas, and subjected to iTRAQ, 2D-DIGE and DNA array based integrated proteomics. iPEACH analysis of 8,471 proteins and 21,857 mRNAs revealed that ECMs-integrins-RAS-MAPK/PI3K signalings were significantly upregulated during GSC differentiation. The differentiation was dramatically accelerated by the ligand ECMs, and suppressed by integrin inhibitors that raised GSC chemosensitivity. Combination of TMZ and their inhibitors suppressed glioma progression and led the longer survival of mouse xenograft models. These results demonstrate that GSCs induce ECMs/receptors-related network to regulate their stemness and differentiation process via developing specific niches. This is the first integrated proteomics providing new therapeutic ideas against the stem cell-associated malignant gliomas.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (42 results)

All 2015 2014 2013 Other

All Journal Article (10 results) (of which Peer Reviewed: 8 results,  Open Access: 2 results) Presentation (27 results) (of which Invited: 14 results) Book (2 results) Remarks (3 results)

  • [Journal Article] TogoTable: cross-database annotation system using the Resource Description Framework (RDF) data model.2014

    • Author(s)
      Kawano S, Watanabe T, Mizuguchi S, Araki N, Katayama T and Yamaguchi A.
    • Journal Title

      Nucleic Acids Resarch

      Volume: 42 Issue: W1 Pages: W442-W448

    • DOI

      10.1093/nar/gku403

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Translationally Controlled Tumor Protein is a Novel Biological Target for Neurofibromatosis Type 1 (NF1)-associated Tumors.2014

    • Author(s)
      Kobayashi, D., Hirayama M., Komohara, Y., Mizuguchi, S, Wilson Morifuji, M. Patrakitkomjorn, S, Ihn, H., Takeya, M, Kuramochi, A., and Araki, N*.
    • Journal Title

      J. Biol. Chem.

      Volume: 289(38) Issue: 38 Pages: 26314-26

    • DOI

      10.1074/jbc.m114.568253

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Development of a fully automated two-dimensional electrophoresis device, Auto-2D, and its application for the integrated proteomics2014

    • Author(s)
      荒木令江*, 南部(新堀 晶子)晶子, 西村宗総、緑川 宇一, 小林大樹
    • Journal Title

      生物物理化学

      Volume: 58(2) Pages: 39-42

    • NAID

      130004704682

    • Related Report
      2014 Annual Research Report
  • [Journal Article] 融合プロテオミクスによるは発がんメカニズムの解析2014

    • Author(s)
      荒木令江*, 南部(新堀 晶子)晶子, 小林大樹
    • Journal Title

      医学のあゆみ

      Volume: 251(10) Pages: 939-947

    • Related Report
      2014 Annual Research Report
  • [Journal Article] Integrated proteomics identified novel activation of dynein IC2-GR-COX-1 signaling in NF1 disease model cells.2013

    • Author(s)
      Hirayama M, Kobayashi D, Mizuguchi S, Morikawa T, Nagayama M, Midorikawa U, Wilson MM, Nambu AN, Yoshizawa AC, Kawano S, Araki N.
    • Journal Title

      Molecular & Cellular Proteomics

      Volume: 28 Issue: 5 Pages: 1377-94

    • DOI

      10.1074/mcp.m112.024802

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Glioma Initiating Cells Form a Differentiation Niche Via the Induction of Extracellular Matrices and Integrin aV2013

    • Author(s)
      Akiko Niibori-Nambu, Uichi Midorikawa, Souhei Mizuguchi, Takuichiro Hide, Minako Nagai,Yoshihiro Komohara, Megumi Nagayama, Mio Hirayama, Daiki Kobayashi, Nobuyuki Tsubota,Tatsuya Takezaki, Keishi Makino, Hideo Nakamura, Motohiro Takeya, Junichi Kuratsu, Norie Araki
    • Journal Title

      PLoS ONE

      Volume: 8(5) Issue: 5 Pages: e59558-e59558

    • DOI

      10.1371/journal.pone.0059558

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Enhancement of human cancer cell motility and invasiveness by anaphylatoxin C5a via aberrantly expressed C5a-receptor (CD88).2013

    • Author(s)
      Nitta, H. et al.
    • Journal Title

      Clinical Cancer Reseach

      Volume: 19 Issue: 8 Pages: 2004-2013

    • DOI

      10.1158/1078-0432.ccr-12-1204

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] CA-S27 : a novel Lewis a associated carbohydrate epitope is diagnostic and prognostic for cholangiocarcinoma2013

    • Author(s)
      Silsirivanit A, Araki N, Wongkham C, Vaeteewoottacharn K, Pairojkul C, Kuwahara K, Narimatsu Y, Sawaki H, Narimatsu H, Okada S, Sakaguchi N, Wongkham S
    • Journal Title

      Cancer Sci

      Volume: 104 Issue: 10 Pages: 1278-1284

    • DOI

      10.1111/cas.12222

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Integrated view of the human chromosome X-centric proteome project.2013

    • Author(s)
      Yamamoto T, Nakayama K, Hirano H, Tomonaga T, Ishihama Y, Yamada T, Kondo T,Kodera Y, Sato Y, Araki N, Mamitsuka H, Goshima N.
    • Journal Title

      J Proteome Res.

      Volume: 12 Issue: 1 Pages: 58-61

    • DOI

      10.1021/pr300844p

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Epiplakin modifies the motility of the HeLa cells and accumulates at the outer surfaces of 3-D cell clusters.2013

    • Author(s)
      Shimada H, Nambu-Niibori A, Wilson-Morifuji M, Mizuguchi S, Araki N, Sumiyoshi H, Sato M, Mezaki Y, Senoo H, Ishikawa K, Hatano Y, Okamoto O, Fujiwara S
    • Journal Title

      J Dermatol

      Volume: 40 Issue: 4 Pages: 249-58

    • DOI

      10.1111/1346-8138.12076

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] Integrated proteomics for identification of specific targets in cancer stem cells2015

    • Author(s)
      Norie Araki
    • Organizer
      KHUPO (THE KOREAN HUMAN PROTEOME ORGANIZATION) 15TH ANNUAL INTERNATIONAL PROTEOMICS CONFERENCE
    • Place of Presentation
      Seoul National University, Seoul, Korea
    • Year and Date
      2015-03-26 – 2015-03-27
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Development of a fully automated two-dimensional electrophoresis device, Auto-2D, and its application for the integrated proteomics2014

    • Author(s)
      Norie Araki
    • Organizer
      日本電気泳動学会シンポジウム
    • Place of Presentation
      横浜
    • Year and Date
      2014-10-21 – 2014-10-22
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 融合プロテオミクス:新規治療標的分子ネットワーク同定のためのマルチオミクス解析基盤2014

    • Author(s)
      小林 大樹, 荒木 令江
    • Organizer
      第87回日本生化学会
    • Place of Presentation
      国立京都国際会館
    • Year and Date
      2014-10-15 – 2014-10-18
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Functional proteome analysis of translationally controlled tumor protein (TCTP), a novel Neurofibromatosis type 1 (NF1)-related protein2014

    • Author(s)
      Daiki Kobayashi, Megumi Nagayama, Mio Hirayama, Sumio Ohtsuki, Norie Araki
    • Organizer
      13th human proteome organization World Congress
    • Place of Presentation
      IFEMA Madrid Spain
    • Year and Date
      2014-10-05 – 2014-10-08
    • Related Report
      2014 Annual Research Report
  • [Presentation] Integrated Proteomics for Cancer Stem Cells2014

    • Author(s)
      Norie Araki, Akiko Nambu, Uichi Midorikawa, Souhei Mizuguchi, Daiki Kobayashi, Jun-ichi Kuratsu
    • Organizer
      13th human proteome organization World Congress
    • Place of Presentation
      IFEMA Madrid Spain
    • Year and Date
      2014-10-05 – 2014-10-08
    • Related Report
      2014 Annual Research Report
  • [Presentation] グリオーマ幹細胞の維持と分化に関わるニッチ分子群の融合プロテオミクスによる解析2014

    • Author(s)
      荒木令江、南部(新堀) 晶子、緑川宇一、水口惣平、小林大樹、ウイルソン森藤政代、秀拓一郎、中村英夫、倉津純一
    • Organizer
      第73回日本癌学会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 融合プロテオミクスによるがん標的となる修飾分子群の抽出と機能解析2014

    • Author(s)
      荒木令江
    • Organizer
      レドックス・ライフイノベーション第170委員会 JHUPOサテライトシンポジウ
    • Place of Presentation
      宮崎 シーガイヤ コンベンションセンター
    • Year and Date
      2014-08-22 – 2014-08-23
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 融合プロテオミクスによる疾患メカニズム解析と 標的分子群の検出 ~がん幹細胞の特異的分子群の解析例から~2014

    • Author(s)
      荒木令江
    • Organizer
      日本プロテオーム学会2014年会
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      2014-07-17 – 2014-07-18
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 融合プロテオミクスによる神経系腫瘍の細胞内特異的タンパク質の解析2014

    • Author(s)
      小林大樹・ 荒木令江
    • Organizer
      日本プロテオーム学会2014年会
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      2014-07-17 – 2014-07-18
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 融合プロテオミクスによる新規NF1病態関連分子ネットワークの同定2014

    • Author(s)
      小林大樹・ 平山未央・ 水口惣平・ 荒木令江
    • Organizer
      第62回質量分析総合討論会
    • Place of Presentation
      大阪府吹田市
    • Year and Date
      2014-05-14 – 2014-05-16
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] プロテオミクスを基盤とした病態システムズバイオロジー~がん幹細胞の分化メカニズムへの応用~2013

    • Author(s)
      荒木令江
    • Organizer
      岡山大学特別講演
    • Place of Presentation
      岡山大学
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] 融合プロテオミクスを基盤とした病態システムズバイオロジーによる癌の治療標的検出への挑戦2013

    • Author(s)
      荒木 令江
    • Organizer
      神戸大学特別講演
    • Place of Presentation
      神戸大学
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Integrated proteomics for identifying the specific signal networks regulated by post-translational modifications in cancer and cancer stem cel.ls.2013

    • Author(s)
      荒木 令江
    • Organizer
      5th ACGG(Asian Commumnications of Glycobiology and Glycotechnology) International Conference.
    • Place of Presentation
      タイ コンケン大
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] 融合プロテオミクスによるグリオーマ幹細胞の分化遊動機構と治療ターゲット分子の解析2013

    • Author(s)
      荒木令江、南部(新堀)晶子、緑川宇一、水口惣平、秀拓一郎、小林大樹、ウィルソン森藤政代、菰原義弘、中村英夫、竹屋元裕、倉津純一.
    • Organizer
      第70回日本癌学会学術総会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] HIF-1 alphaシグナルを介した細胞競合によるヘテロな口腔癌細胞集団の発育機構(Heterogeneous oral cancer development by competition via HIF-1 alpha signal regulation)2013

    • Author(s)
      森藤 政代(モリフジ マサヨ)、 南部(新堀) 晶子、 小林 大樹、荒木 令江
    • Organizer
      第70回日本癌学会学術総会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] An Integrated Proteomics for Extracting Molecular Target of Malignant Gliomas.2013

    • Author(s)
      Norie Araki, Takashi Morikawa, Souhei Mizuguchi, Daiki Kobayashi, Akiko Niibori Nambu, Uichi Midorikawa, Mio Hirayama, Masayo morifuji Wilson, Sin Kawano, Hideo Nakamura, Junichi Kuratsu.
    • Organizer
      HUPO 11th Annual World Congress
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] Integrated Proteomics for the Study of Metastatic Human Tongue Cancer Development in a heterogeneous Microenvironment2013

    • Author(s)
      Masayo Wilson Morifuji, Akiko Niibori Nambu, daiki kobayashi, Norie Araki.
    • Organizer
      HUPO 11th Annual World Congress
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] Integrated Proteomics for the Study of Metastatic Human Tongue Cancer Development in a heterogeneous Microenvironment.2013

    • Author(s)
      Masayo Wilson Morifuji, Akiko Niibori Nambu, daiki kobayashi, Norie Araki
    • Organizer
      HUPO 11th Annual World Congress English oral
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] Integrated Proteomics Identified Novel Activation of Dynein IC2-GR-COX-1 Signaling by Suppression of NF1 Tumor Suppressor Gene Product, Neurofibromin, in Neuronal Cells..2013

    • Author(s)
      Daiki Kobayashi, Mio Hirayama, Souhei Mizuguchi Takashi Morikawa, Megumi Nagayama, Uichi Midorikawa, Masayo Wilson-Morifuji, Akiko Nambu-Niibori, Akiyasu Yoshizawa C., Shin Kawano, Norie Araki
    • Organizer
      HUPO 11th Annual World Congress
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] Integrated Proteomics Identified the Akiko Differentination Niche Induced by glioma Stem Cells.2013

    • Author(s)
      Niiboari Nambu, Uichi Midorikawa, Souhei Mizuguchi, Takuichiro Hide, Minako Nagai, Yoshihiro Komohara, Megumi Nagayama, Mio Hirayama, Daiki Kobayashi, Hideo Nakamura, Motohiro Takeya, Jyunichi Kuratsu, Norie Araki.
    • Organizer
      HUPO 11th Annual World Congress
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] A quick profiling System for Cancer marker Proteins with Diverse Post-Translational Modifications by a Fully Automated 2DE Device, Auto-2D.2013

    • Author(s)
      Munenori Nishimura, Uichi Midorikawa, Megumi Nagayama, Daiki Kobayashi, Mio Hirayama, Yoji Murakami, Yoshihiro Wada, Takahisa Imamura, Yutaka Unuma, Norie Araki.
    • Organizer
      HUPO 11th Annual World Congress
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] 融合プロテオミクスによるグリオーマ幹細胞の分化ニッチと悪性化メカニズムの解析.2013

    • Author(s)
      荒木令江、南部(新堀)晶子、緑川宇一、小林大樹、水口惣平、永井美奈子、秀拓一郎、中村英夫、倉津純一
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] 融合プロテオミクスによる神経線維腫症I型(NF1)病態モデル細胞内活性化シグナルDynein IC2-GR-COX-1の同定.2013

    • Author(s)
      小林大樹、平山未央、水口惣平、森川崇、長山慈、緑川宇一、ウィルソン-森藤政代、南部-新堀晶子、吉沢晶康、河野信、荒木令江.
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] 全自動2次元電気泳動装置を用いた前立腺がんマーカータンパク質の解析.2013

    • Author(s)
      西村宗徳、小林大樹、緑川宇一、長山慈、村上洋嗣、河野吉昭、今村隆寿、和田孝浩、鵜沼豊、荒木令江
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] 神経系腫瘍の発症メカニズムと治療ターゲットの融合プロテオミクスによる解析2013

    • Author(s)
      荒木 令江
    • Organizer
      宮崎大学医学部脳神経外科学特別講演
    • Place of Presentation
      宮崎大学
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] 融合プロテオミクスによるがん細胞およびがん幹細胞の悪性化ネットワーク抽出と治療ターゲットの検索2013

    • Author(s)
      荒木 令江
    • Organizer
      第40回BMS (Biological Mass Spectrometry)コンファレンス招待講演
    • Place of Presentation
      宮崎シーガイヤ コンベンションセンター&シェラトングランデオーシャンリゾート
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] 融合プロテオミクスによる異常病態シグナル検出システムの開発と応用2013

    • Author(s)
      荒木 令江
    • Organizer
      BIO Tech2013 第12回国際バイオテクノロジー展/技術会議
    • Place of Presentation
      東京ビッグサイト
    • Related Report
      2013 Research-status Report
    • Invited
  • [Book] プロテオミクス辞典2013

    • Author(s)
      荒木令江
    • Total Pages
      127
    • Publisher
      講談社
    • Related Report
      2013 Research-status Report
  • [Book] 神経線維腫症2型,皮膚科臨床アセット152013

    • Author(s)
      荒木令江
    • Total Pages
      384
    • Publisher
      中山書店
    • Related Report
      2013 Research-status Report
  • [Remarks] 熊本大学大学院生命科学研究部腫瘍医学分野

    • URL

      http://srv02.medic.kumamoto-u.ac.jp/dept/tumor/index.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] 日本プロテオームデータベースセンター

    • URL

      https://www.jhupo.org/database/index.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] 熊本大学大学院生命科学研究部腫瘍医学分野

    • URL

      http://srv02.medic.kumamoto-u.ac.jp/dept/tumor/index.html

    • Related Report
      2013 Research-status Report

URL: 

Published: 2014-07-25   Modified: 2019-07-29  

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