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Evolutionary stability and developmental dynamics of the plant mitochondrial genome

Research Project

Project/Area Number 25640102
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Genome biology
Research InstitutionKobe University

Principal Investigator

Mori Naoki  神戸大学, (連合)農学研究科(研究院), 教授 (60230075)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2015: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2014: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2013: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywordsコムギ / ミトコンドリアゲノム / 進化的安定性 / 分子内組換え / 細胞質置換系統 / Aegilops caudata / マイクロサテライト / Triticum aestivum / プラズモン / パンコムギ / サブリモン
Outline of Final Research Achievements

Mitochondria and chloroplast are deeply involved in the important activities in the cell through the complex interaction between nuclear genome. To examine the evolutionary stability of the plasmon, we evaluated the molecular variation in chloroplast and mitochondrial genome between the alloplasmic wheat line with an alien cytoplasm and the donor line of the cytoplasm. This alloplasmic line has been maintained for more than 60 generation by repeated backcrossing. No variation was identified between the alloplasmic line and the donor line, indicated the evolutionary stable nature of the plasmon in wheat. In addition, we found that the intramolecular recombination in mitochondrial genome occurs in almost all of the tissues, although the frequency is very low as well as variable among tissues.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (27 results)

All 2016 2015 2014 2013 Other

All Int'l Joint Research (1 results) Journal Article (8 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 8 results,  Open Access: 4 results,  Acknowledgement Compliant: 3 results) Presentation (16 results) (of which Invited: 1 results) Book (2 results)

  • [Int'l Joint Research] USDA-ARS Cereal Disease Laboratory(米国)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Chloroplast DNA haplotype variation within two natural populations of wild emmer wheat (Triticum turgidum ssp. dicoccoides) in southern Turkey.2015

    • Author(s)
      Shizuka, T. N. Mori, H. Ozkan and S. Ohta
    • Journal Title

      Biotechnology & Biotechnological Equipment.

      Volume: 29 Issue: 3 Pages: 423-430

    • DOI

      10.1080/13102818.2015.1012648

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Chloroplast DNA haplotype variation within two natural populations of wild emmer wheat (Triticum turgidum ssp. dicoccoides) in southern Turkey2015

    • Author(s)
      Shizuka, T., N. Mori, H. Ozkan and S. Ohta
    • Journal Title

      Biotechnology & Biotechnological Equipment

      Volume: -

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Genetic effect of the Aegilops caudata plasmon on the manifestation of the Ae. cylinrica genome2014

    • Author(s)
      Tsunewaki, K., N. Mori and S. Takumi
    • Journal Title

      Genes and Genetic Systems

      Volume: 89 Pages: 195-202

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Mapping QTLs for cold tolerance at germination and the early seedling stage in rice (Oryza saliva L.)2014

    • Author(s)
      Ranawake, A. L., Managkil, O. E., Yoshida, S., Ishii, T., Mori, N. and Nakamura, C.
    • Journal Title

      Biotechnology & Biotechnological Equipment

      Volume: 28 Issue: 6 Pages: 989-998

    • DOI

      10.1080/13102818.2014.978539

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Rediscovery of Indian dwarf wheat (Triticum aestivum L. ssp. sphaerococcum (Perc.)MK. an ancient crop of the Indian subcontinent.2013

    • Author(s)
      Mori, N., S. Ohta, H. Chiba, T. Takagi, Y. Niimi, V. Shinde, M. Kajale and T. Osada
    • Journal Title

      Genet Resour. Crop Evol.

      Volume: 60 Issue: 6 Pages: 1771-1775

    • DOI

      10.1007/s10722-013-9994-z

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] A possible breakage of linkage disequilibrium between mitochondrial and chloroplast genomes during Emmer and Dinkel wheat evolution.2013

    • Author(s)
      Tsujimura, M., N. Mori, H. Yamagishi and T. Terachi
    • Journal Title

      Genome

      Volume: 56 Issue: 4 Pages: 187-193

    • DOI

      10.1139/gen-2012-0153

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Molecular genetic analysis of domestication traits in emmer wheat. I: Map construction and QTL analysis using a F2 population.2013

    • Author(s)
      Thanh, P. T., Vladutu, C. I., Kianian, S. F., Thanh, P. T, Ishii, T., Nitta, M., Nasuda, S. and Mori, N.
    • Journal Title

      Biotechnology & Biotechnological Equipment

      Volume: 27 Pages: 3627-3637

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Mapping of quantitative trait loci controlling seedling vigor in rice (Oryza sativa L.) under submergence.2013

    • Author(s)
      Manangkil, O.E., Vu, H.T.T., Mori, N., Yoshida, S. and Nakamura, C.
    • Journal Title

      Euphytica

      Volume: 192 Issue: 1 Pages: 63-75

    • DOI

      10.1007/s10681-012-0857-z

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] スペルタコムギが持つVIIb型ミトコンドリアゲノムの解析2016

    • Author(s)
      辻村 真衣, 森 直樹, 寺地 徹
    • Organizer
      日本育種学会第129回講演会
    • Place of Presentation
      横浜市立大学 (神奈川県・横浜市)
    • Year and Date
      2016-03-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] 非休眠性個体を高頻度で含む野生四倍性コムギ集団の探索-栽培コムギ集団の成立をめぐって2016

    • Author(s)
      大田 正次, 森 直樹, Ozkan Hakan
    • Organizer
      日本育種学会第129回講演会
    • Place of Presentation
      横浜市立大学 (神奈川県・横浜市)
    • Year and Date
      2016-03-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] 酒米のルーツをさぐる - DNAでさぐる日本酒米の起源2016

    • Author(s)
      森 直樹
    • Organizer
      橿原昆虫館 サイエンスカフェ
    • Place of Presentation
      橿原市昆虫館 (奈良県・橿原市)
    • Year and Date
      2016-03-12
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] コムギのミトコンドリアゲノムの分子内組換えの定量的解析2015

    • Author(s)
      太田 星史, 牧田 真之, 辻村 真衣, 寺地 徹, 森 直樹
    • Organizer
      第10回 ムギ類研究会
    • Place of Presentation
      伊勢市観光文化会館 (三重県・伊勢市)
    • Year and Date
      2015-12-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] 栽培エンマーコムギの遺伝的背景に野生種の染色体断片を導入した戻し交雑自殖系統を用いた栽培化関連QTLの解析2015

    • Author(s)
      宮崎 裕貴, Pham-Minh Ngoc, Vladutu Christian, 石井 尊生, Kianian Shahryar, 森 直樹
    • Organizer
      第10回 ムギ類研究会
    • Place of Presentation
      伊勢市観光文化会館 (三重県・伊勢市)
    • Year and Date
      2015-12-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] 野生エンマーコムギの遺伝的背景に栽培種の染色体断片を導入した戻し交雑自殖系統を用いた栽培化関連形質の解析2015

    • Author(s)
      島田 沙織, 牛 恒一, Vladutu Christian, 石井 尊生, Kianian Shahryar, 森 直樹
    • Organizer
      第10回 ムギ類研究会
    • Place of Presentation
      伊勢市観光文化会館 (三重県・伊勢市)
    • Year and Date
      2015-12-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] 栽培エンマーコムギの遺伝的背景に野生種の染色体断片を導入した戻し交雑自殖系統を用いた栽培化関連形質の遺伝学的解析2015

    • Author(s)
      宮崎 裕貴, Pham-Minh Ngoc, Vladutu Cristian, 石井 尊生, Kianian Shahryar, 森 直樹
    • Organizer
      日本育種学会第128回講演会
    • Place of Presentation
      新潟大学 (新潟県・新潟市)
    • Year and Date
      2015-09-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] 野生二粒系コムギの遺伝的背景に栽培種の染色体断片を導入した戻し交雑自殖系統群の作出:栽培化関連形質の遺伝学的解析に向けて2015

    • Author(s)
      森 直樹, 牛 恒一, Vladutu Cristian, 石井 尊生, Kianian Shahryar
    • Organizer
      日本育種学会第128回講演会
    • Place of Presentation
      新潟大学 (新潟県・新潟市)
    • Year and Date
      2015-09-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] トルコ南部に位置する二つの自然集団における野生二粒系コムギ (Triticum turgidum ssp. dicoccoides) の葉緑体ゲノムの多様性2015

    • Author(s)
      森直樹, 静貴子, H. Ozkan, 大田正次
    • Organizer
      日本育種学会 第127回大会
    • Place of Presentation
      玉川大学
    • Year and Date
      2015-03-21 – 2015-03-22
    • Related Report
      2014 Research-status Report
  • [Presentation] 4倍性コムギのミトコンドリアゲノムのタイプを変更する核ゲノム領域の特定2014

    • Author(s)
      辻村真衣, 森直樹, 山岸博, 寺地徹
    • Organizer
      日本育種学会 第126回大会
    • Place of Presentation
      南九州大学
    • Year and Date
      2014-09-26 – 2014-09-27
    • Related Report
      2014 Research-status Report
  • [Presentation] 戻し交雑自殖系統を用いたエンマーコムギの栽培化関連形質の遺伝学的解析2014

    • Author(s)
      森直樹, P. M. Ngoc, C. Vladutu, P. T. Thanh, P. T. Thanh, 石井尊生, S. Kianian
    • Organizer
      日本育種学会 第126回大会
    • Place of Presentation
      南九州大学
    • Year and Date
      2014-09-26 – 2014-09-27
    • Related Report
      2014 Research-status Report
  • [Presentation] 野生コムギの種子休眠性-栽培化過程における種子サイズの増加に伴う休眠性の消失2014

    • Author(s)
      大田正次、森直樹、オズカン ハカン
    • Organizer
      日本育種学会 第125回大会
    • Place of Presentation
      東北大学
    • Related Report
      2013 Research-status Report
  • [Presentation] Genetic analysis of domestication traits in emmer wheat using an F2 population.2013

    • Author(s)
      Naoki Mori, Phan Thi Thanh, Cristian Vladutu, Pham Thien Thanh, Takashige Ishii, Miyuki Nitta, Shuhei Nasuda, Shahryar Kianian
    • Organizer
      12th International Wheat Genet. Symp.
    • Place of Presentation
      Yokohama, Japan
    • Related Report
      2013 Research-status Report
  • [Presentation] 核ゲノム構成により違いを示すEmmer-Dinkelコムギのミトコンドリアの多型2013

    • Author(s)
      辻村真衣 森直樹 山岸博 寺地徹
    • Organizer
      日本育種学会 第124回大会
    • Place of Presentation
      鹿児島大学
    • Related Report
      2013 Research-status Report
  • [Presentation] Genetic diversity and differentiation of chloroplast genome in wild emmer wheat within and among its natural populations2013

    • Author(s)
      静 貴子, 森 直樹, 大田 正次, オズカン ハカン
    • Organizer
      日本育種学会 第124回大会
    • Place of Presentation
      鹿児島大学
    • Related Report
      2013 Research-status Report
  • [Presentation] 自然集団における野生二倍性コムギ及び四倍性コムギの小穂と頴果の形態的変異2013

    • Author(s)
      大井紗貴、大田正次、森直樹、オズカン ハカン
    • Organizer
      日本育種学会 第124回大会
    • Place of Presentation
      鹿児島大学
    • Related Report
      2013 Research-status Report
  • [Book] 「インダスー南アジア基層世界をさぐる」、第11章「インド冬作物の起源と変遷」2013

    • Author(s)
      大田 正次、森 直樹 (長田 俊樹 編)
    • Total Pages
      454
    • Publisher
      京都大学出版会
    • Related Report
      2013 Research-status Report
  • [Book] 「インダス-南アジア基層世界をさぐる」、コラム7「それなら知っているよgundu-godiだよ - インド矮性コムギ再発見の日」2013

    • Author(s)
      森 直樹 (長田 俊樹 編)
    • Total Pages
      454
    • Publisher
      京都大学出版会
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2022-01-27  

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