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Development of the gel coating technique for the automation of the inhibitor search by the X-ray crystal structure analysis

Research Project

Project/Area Number 25650015
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Structural biochemistry
Research InstitutionHokkaido University

Principal Investigator

TANAKA Isao  北海道大学, 先端生命科学研究科(研究院), 特任教授 (70093052)

Co-Investigator(Renkei-kenkyūsha) YAO Min  北海道大学, 大学院先端生命科学研究院, 教授 (40311518)
Research Collaborator SHINODA Akira  
Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2014: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2013: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
KeywordsX線結晶解析 / 創薬 / ゲル / リガンドソーキング / SBDD
Outline of Final Research Achievements

X-ray crystallography is an important technique for structure based drug discovery, mainly because it is the only technique that can reveal whether a ligand binds to the target protein as well as where and how it binds. However, ligand screening by X-ray crystallography involves a crystal-soaking experiment, which is usually performed manually. Thus, the throughput is not satisfactory for screening large numbers of candidate ligands. In this study, a technique to anchor protein crystals to mounting loops by using gel and inkjet technology has been developed; the method allows soaking of the mounted crystals in ligand-containing solution. This new technique may assist in the design of a fully automated drug-screening pipeline.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (5 results)

All 2014 Other

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (2 results) Remarks (2 results)

  • [Journal Article] Anchoring protein crystals to mounting loops with hydrogel using inkjet technology2014

    • Author(s)
      Akira Shinoda, Yoshikazu Tanaka, Min Yao and Isao Tanaka
    • Journal Title

      Acta Crystallographica Section D

      Volume: D70 Issue: 11 Pages: 2794-2799

    • DOI

      10.1107/s139900471401476x

    • NAID

      120005530838

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Presentation] インクジェットと親水性ゲルを用いた結晶固定法の開発2014

    • Author(s)
      篠田晃,田中良和,姚閔,田中勲
    • Organizer
      平成26年度日本結晶学会年会
    • Place of Presentation
      東京大学農学部(東京都文京区)
    • Year and Date
      2014-11-01 – 2014-11-03
    • Related Report
      2014 Annual Research Report
  • [Presentation] Inkjet technology to anchor protein crystals to mounting loop with hydro-gel2014

    • Author(s)
      Akira Shinoda, Yoshikazu Tanaka, Min Yao, Isao Tanaka
    • Organizer
      15th International Conference on the Crystallization of Biological Macromolecules (ICCBM15)
    • Place of Presentation
      Universitat Hamburg (Hamburg, Germany)
    • Year and Date
      2014-09-17 – 2014-09-20
    • Related Report
      2014 Annual Research Report
  • [Remarks] 北海道大学 X線構造生物学研究室 ホームページ

    • URL

      http://altair.sci.hokudai.ac.jp/g6/

    • Related Report
      2014 Annual Research Report
  • [Remarks] 北海道大学 X線構造生物学研究室 ホームページ

    • URL

      http://altair.sci.hokudai.ac.jp/g6/

    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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