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Establishment of an over-expression system for mammalian large membrane proteins

Research Project

Project/Area Number 25650020
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Structural biochemistry
Research InstitutionThe University of Tokyo

Principal Investigator

Ogawa Haruo  東京大学, 分子細胞生物学研究所, 准教授 (40292726)

Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2014: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2013: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Keywords大量発現 / 膜蛋白質 / アデノウィルス / 超巨大蛋白質
Outline of Final Research Achievements

Although the number of atomic structures of membrane proteins deposited in PDB increases year by year, most of them are bacterial homologues of mammalian ones or low molecular-weight ones such as GPCRs. X-ray crystallographic studies of mammalian large membrane proteins have not been conducted well. One of the reasons is that there is no easy as well as versatile system for the protein production of such proteins. Thus, we aimed to establish an over-expression system for mammalian large membrane proteins, such as IP3 receptor, with modifications of our own expression system. The new system should be useful for carrying out kinetic studies for such proteins which could not be studied so far. Moreover, high-resolution strucuture of such proteins should be useful for new drug-development.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (23 results)

All 2017 2016 2015 2014 2013

All Journal Article (8 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 7 results,  Open Access: 2 results) Presentation (15 results) (of which Int'l Joint Research: 2 results,  Invited: 4 results)

  • [Journal Article] Genotype-phenotype correlations of malignant hyperthermia and central core disease mutations in the central region of the RYR1 channel.2016

    • Author(s)
      Murayama, T., Kurebayashi, N., Ogawa, H., Yamazawa, T., Oyamada, H., Suzuki, J., Kanemaru, K., Oguchi, K., Iino, M. and Sakurai, T.
    • Journal Title

      Hum Mutat.

      Volume: 37 Issue: 11 Pages: 1231-1241

    • DOI

      10.1002/humu.23072

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Sequential substitution of K+ bound to Na+,K+-ATPase visualized by X-ray crystallography2015

    • Author(s)
      Ogawa, H., Cornelius, F., Hirata, A., Toyoshima, C.
    • Journal Title

      Nat Commun.

      Volume: 6 Issue: 1 Pages: 8004-8004

    • DOI

      10.1038/ncomms9004

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Functional analysis of SERCA1b, a highly expressed SERCA1 variant in myotonic dystrophy type 1 muscle2015

    • Author(s)
      Zhao, Y., Ogawa, H., Yonekura, S., Mitsuhashi, H., Mitsuhashi, S., Nishino, I., Toyoshima, C., Ishiura, S.
    • Journal Title

      Biochim. Biophys. Acta.

      Volume: 1852 Issue: 10 Pages: 2042-2047

    • DOI

      10.1016/j.bbadis.2015.07.006

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Biselyngbyasides, Cytotoxic Marine Macrolides, are Novel and Potent Inhibitors of the Ca2+ Pumps with a Unique Mode of Binding2015

    • Author(s)
      Morita, M., Ogawa, H., Ohno, O., Yamori, T., Suenaga, K., Toyoshima, C.
    • Journal Title

      FEBS Lett.

      Volume: 589 Issue: 13 Pages: 1406-1411

    • DOI

      10.1016/j.febslet.2015.04.056

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Stimulation, inhibition or stabilization of Na, K-ATPase caused by specific lipid interactions at distinct sites2015

    • Author(s)
      M. Habeck, H. Haviv, A. Katz, E. Kapri-Pardes, S. Ayciriex, A. Shevchenko, H. Ogawa, C. Toyoshima, and S.J.D. Karlish
    • Journal Title

      J. Biol. Chem.

      Volume: 290 Issue: 8 Pages: 4829-4842

    • DOI

      10.1074/jbc.m114.611384

    • Related Report
      2015 Research-status Report 2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] ナトリウムポンプ蛋白質がナトリウムを選択的に運搬する機構 - How the Na+-pump recognizes and transports Na+ selectively.2015

    • Author(s)
      小川治夫, 金井隆太, 豊島近
    • Journal Title

      医学のあゆみ

      Volume: 254 Pages: 1186-1187

    • Related Report
      2015 Research-status Report
  • [Journal Article] Crystal structure of a Na^+-bound Na^+, K^+-ATPase preceding the E1P state.2013

    • Author(s)
      R. Kanai, H. Ogawa, B. Vilsen, F. Cornelius and C. Toyoshima
    • Journal Title

      Nature

      Volume: 502 Issue: 7470 Pages: 201-206

    • DOI

      10.1038/nature12578

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Crystal structures of the calcium pump and sarcolipin in the E1·Mg2+ state.2013

    • Author(s)
      C. Toyoshima
    • Journal Title

      Nature

      Volume: 495 Issue: 7440 Pages: 260-264

    • DOI

      10.1038/nature11899

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] Recent advances in structural studies of SR Ca2+-ATPase2017

    • Author(s)
      小川治夫
    • Organizer
      第94回日本生理学会
    • Place of Presentation
      浜松アクトシティコングレスセンター(静岡県浜松市)
    • Year and Date
      2017-03-28
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Large-scale production of mammalian membrane proteins toward determination of high resolution structures2017

    • Author(s)
      Haruo Ogawa, Chikashi Toyoshima
    • Organizer
      Biophysical Society 61st Annual Meeting
    • Place of Presentation
      New Orleans, Louisiana, USA
    • Year and Date
      2017-02-11
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Ca2+-ポンプ構造研究の最前線2016

    • Author(s)
      小川治夫、樺島佳樹、豊島近
    • Organizer
      日本生体エネルギー研究会 第42回討論会
    • Place of Presentation
      名古屋工業大学4号館ホール(愛知県名古屋市)
    • Year and Date
      2016-12-19
    • Related Report
      2016 Annual Research Report
  • [Presentation] 高分解能構造解析へ向けた哺乳類由来膜蛋白質の大量生産2016

    • Author(s)
      小川治夫、村山尚、呉林なごみ、豊島近
    • Organizer
      第89回 日本生化学会大会シンポジウム
    • Place of Presentation
      仙台国際センター/東北大学川内北キャンパス(宮城県仙台市)
    • Year and Date
      2016-09-25
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Kinetics by X-ray crystallography:sequential substitution of K+ bound to Na+,K+-ATPase2016

    • Author(s)
      Haruo Ogawa, Flemming Cornelius,Ayami Hirata, Chikashi Toyoshima
    • Organizer
      Biophysical Society 60th annual meeting
    • Place of Presentation
      Los Angeles Convention center, Los Angeles, California (USA)
    • Year and Date
      2016-02-27
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] X線結晶構造解析によるキネティックス測定:Na+,K+-ATPaseに結合したK+は段階的に置換される2015

    • Author(s)
      小川治夫, 平田絢美, Flemming Cornelius, 豊島近
    • Organizer
      日本生体エネルギー研究会 第41回討論会
    • Place of Presentation
      東京大学医学部1号館講堂(東京都・文京区)
    • Year and Date
      2015-12-21
    • Related Report
      2015 Research-status Report
  • [Presentation] Kinetics by X-ray crystallography: sequential substitution of K+ bound to Na+,K+-ATPase.2015

    • Author(s)
      Haruo Ogawa, Flemming Cornelius,Ayami Hirata, Chikashi Toyoshima
    • Organizer
      BMB2015(第38回日本分子生物学会 第88回日本生化学会合同大会)ワークショップ
    • Place of Presentation
      神戸ポートアイランド(兵庫県・神戸市)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Sequential substitution of bound K+ in the transmembrane binding sites of Na+,K+-ATPase, kinetics by X-ray crystallography.2015

    • Author(s)
      Haruo Ogawa, Flemming Cornelius,Ayami Hirata, Chikashi Toyoshima
    • Organizer
      日本生物物理学会第53回年会シンポジウム
    • Place of Presentation
      金沢大学 角間キャンパス自然科学本館(石川県・金沢市)
    • Year and Date
      2015-09-13
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] X-線結晶構造解析が明かすビセリングビアサイド類のCa2+ポンプ阻害機構2015

    • Author(s)
      森田 真布, 小川 治夫, 杖田 淳子, 大野 修, 矢守 隆夫, 豊島 近, 末永 聖武
    • Organizer
      日本化学会第95春季年会2015
    • Place of Presentation
      日本大学理工学部船橋キャンパス/薬学部(千葉県船橋市)
    • Year and Date
      2015-03-26 – 2015-03-29
    • Related Report
      2014 Research-status Report
  • [Presentation] X-ray crystallographic study of Na,K-ATPase in complex with cardiotonic steroids2015

    • Author(s)
      Haruo Ogawa, Kanna Motoyama, Flemming Cornelius, Bente Vilsen, Chikashi Toyoshima
    • Organizer
      Biophysical Society 59th Annual meeting
    • Place of Presentation
      Baltimore Convention Center, Baltimore, MD, USA
    • Year and Date
      2015-02-07 – 2015-02-11
    • Related Report
      2014 Research-status Report
  • [Presentation] Na+,K+-ATPaseと強心配糖体複合体のX線結晶構造解析2014

    • Author(s)
      小川 治夫, 元山 かん奈, Cornelius Flemming, Vilsen Bente, 豊島 近
    • Organizer
      第87回日本生化学会
    • Place of Presentation
      京都国際会館(京都府京都市)
    • Year and Date
      2014-10-15 – 2014-10-18
    • Related Report
      2014 Research-status Report
  • [Presentation] 筋強直性ジストロフィーの病態に関わる筋小胞体Ca2+-ATPase 1スプライスバリアントの機能的差異2014

    • Author(s)
      趙 一夢, 小川 治夫, 米倉 慎一郎, 三橋 弘明, 豊島 近, 石浦 章一
    • Organizer
      第87回日本生化学会
    • Place of Presentation
      京都国際会館(京都府京都市)
    • Year and Date
      2014-10-15 – 2014-10-18
    • Related Report
      2014 Research-status Report
  • [Presentation] Large Production of SERCA toward determination of three-dimensional structures2014

    • Author(s)
      Haruo Ogawa, Yimeng Zhao, Ayami Hirata, Junko Tsueda, Shoichi Ishiura, Giuseppe Inesi, Chikashi Toyoshima
    • Organizer
      14th International Conference Na,K-ATPase and related transport ATPases: Structure, mechanism, cell biology, health and disease
    • Place of Presentation
      De Werelt Conference Centre, Lunteren, Netherlands
    • Year and Date
      2014-08-30 – 2014-09-05
    • Related Report
      2014 Research-status Report
  • [Presentation] Extensive analysis on the interaction between sarcolipin and Ca2+-ATPase2013

    • Author(s)
      Ogawa, H., Iwasawa, S., Hirata, A., Tsueda, J., Toyoshima, C.
    • Organizer
      第86回日本生化学会大会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2013 Research-status Report
  • [Presentation] Large production of mammalian membrane proteins toward determination of three-dimensional structures2013

    • Author(s)
      Ogawa, H., Hirata, A., Tsueda, J., Inesi, G., Toyoshima, C.
    • Organizer
      The 2nd HD Physiology International Symposium
    • Place of Presentation
      丸の内 My Plaza Hall
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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