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Structural study of reconstitued full length PKC

Research Project

Project/Area Number 25650025
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Structural biochemistry
Research InstitutionTokyo Metropolitan University

Principal Investigator

MISHIMA Masaki  首都大学東京, 理工学研究科, 准教授 (70346310)

Co-Investigator(Renkei-kenkyūsha) ITO Yutaka  首都大学東京, 大学院・理工学研究科, 教授 (80261147)
HIRAI Go  独立行政法人理化学研究所, 専任研究員 (50359551)
SODEOKA Mikiko  独立行政法人理化学研究所, 主任研究員 (60192142)
Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2013: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
KeywordsNMR / マルチドメインタンパク質 / sortase / プロテインライゲーション / PKC / 構造解析 / 活性制御
Outline of Final Research Achievements

Protein kinase C (PKC) family is a multi-domain protein consists of N-terminal regulatory domains (C1 and C2 domain) and C-terminal kinase domain, and regulates a wide range of biological processes. In cytoplasm, PKC is thought to be autoinhibited by the interaction between regulatory domains and the kinase domain. Recently, the full-length crystal structure of PKCbII was reported. However, in this crystal structure, the C1A domain was not observed and the C2 domain was influenced by the crystal packing interaction. Therefore, the domain orientation and the interactions between the domains of PKC are still elusive. In this study, we are trying to determine the structures of full-length PKC proteins, PKCalpha and PKCtheta, and investigate the regulation mechanism using long-range distance information derived from PRE detected by solution hetero-nuclear NMR.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (26 results)

All 2015 2014 2013

All Journal Article (10 results) (of which Peer Reviewed: 9 results,  Acknowledgement Compliant: 2 results,  Open Access: 2 results) Presentation (15 results) Book (1 results)

  • [Journal Article] Evaluation of the reliability of the maximum entropy method for reconstructing 3D and 4D NOESY-type NMR spectra of proteins.2015

    • Author(s)
      Shigemitsu, Y., Ikeya, T., Yamamoto, A., Tsuchie, Y., Mishima, M., Smith, B. O., Guentert, P. & Ito, Y.
    • Journal Title

      Biochem. Biophys. Res. Commun.

      Volume: 457 Issue: 2 Pages: 200-205

    • DOI

      10.1016/j.bbrc.2014.12.088

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] 転写補因子の複合体形成におけるCK2によるリン酸化の分子スイッチとしての役割2015

    • Author(s)
      三島正規、小林彩保、金場哲平
    • Journal Title

      生化学

      Volume: 87 Pages: 258-261

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Efficient and cost effective production of active-form human PKB using silkworm larvae.2014

    • Author(s)
      R. Maesaki, R. Satoh, M. Taoka, T. Kanaba, T. Asano, C. Fujita, T. Fujiwara, Y. Ito, T. isobe, T. Hakoshima, K. Maenaka, and M. Mishima
    • Journal Title

      Scientific Reports

      Volume: 4 Issue: 1 Pages: 6016-6016

    • DOI

      10.1038/srep06016

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 転写抑制補助因子のcasein kinase 2によるリン酸化と転写制御2014

    • Author(s)
      小林彩保、金場哲平、三島正規
    • Journal Title

      細胞工学

      Volume: 33 Pages: 656-657

    • Related Report
      2014 Annual Research Report
  • [Journal Article] Structural insights into the recruitment of SMRT by the corepressor SHARP under phosphorylative regulation.2014

    • Author(s)
      Mikami S, Kanaba T, Takizawa N, Kobayashi A, Maesaki R, Fujiwara T, Ito Y,Mishima M.
    • Journal Title

      Structure.

      Volume: 22 Issue: 1 Pages: 35-46

    • DOI

      10.1016/j.str.2013.10.007

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Microtubule-binding sites of the CH domain of EBl and its autoinhibition revealed by NMR.2013

    • Author(s)
      Kanaba T, Maesaki R, Mori T, I to Y, Hakoshima T, Mishima M.
    • Journal Title

      Biochim Biophys Acta.

      Volume: 1834 Issue: 2 Pages: 499-507

    • DOI

      10.1016/j.bbapap.2012.10.013

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] High-resolution heteronuclear multidimensional NMR of proteins living insect cells using a baculovirus protein expression system ≪2013

    • Author(s)
      Jumpei Hamatsu, Daniel O'Donovan, Takashi Tanaka, Takahiro Shirai, Yuichiro Hourai, Tsutomu Mikawa, Teppei Ikeya, Masaki Mishima, Wayne Boucher, Brian O. Smith, Ernest D. Laue, Masahiro Shirakawa, Yutaka Ito 4
    • Journal Title

      Journal of the American Chemical Society

      Volume: 135 Issue: 5 Pages: 1688-1691

    • DOI

      10.1021/ja310928u

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Divergent DNA-binding specificities of a group of ETHYLENE RESPONSE FACTOR transcription factors involved in plant defense.2013

    • Author(s)
      Shoji T, Mishima M, Hashimoto T.
    • Journal Title

      Plant Physiol.

      Volume: 162 Issue: 2 Pages: 977-990

    • DOI

      10.1104/pp.113.217455

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Structure of the second RRM domain of Nrd1, a fission yeast MAPK target RNA binding protein, and implication for its RNA recognition and regulation.2013

    • Author(s)
      Kobayashi A, Kanaba T, Satoh R, Fujiwara T, Ito Y, Sugiura R, Mishima M.
    • Journal Title

      Biochem Biophys Res Commun.

      Volume: 437 Issue: 1 Pages: 12-17

    • DOI

      10.1016/j.bbrc.2013.06.008

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] An in-cell NMR study of monitoring stress-induced increase of cytosolic Ca2+ concentration in HeLa cells2013

    • Author(s)
      Dambarudhar Shiba Sankar Hembrama, Takahiro Haremakia, Jumpei Hamatsua, Jin Inouea, Hajime Kamoshidaa, Teppei Ikeyaa, Masaki Mishimaa, Tsutomu Mikawab, Nobuhiro Hayashic, Masahiro Shirakawad, Yutaka Ito
    • Journal Title

      Biochem Biophys Res Commun

      Volume: 438 Issue: 4 Pages: 653-659

    • DOI

      10.1016/j.bbrc.2013.07.127

    • Related Report
      2013 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] RNA結合蛋白質Nrd1のNMR法による構造解析2014

    • Author(s)
      小林彩保、中西絢子、佐藤亮介、藤原俊伸、伊藤隆、杉浦麗子、三島正規
    • Organizer
      日本分子生物学会
    • Place of Presentation
      横浜
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] NMRを用いた溶液中のマルチドメインタンパク質Protein Kinase Cの構造解析2014

    • Author(s)
      金場 哲平、宮田 和舞、前崎 綾子、伊藤 隆、三島 正規
    • Organizer
      日本分子生物学会
    • Place of Presentation
      横浜
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] NMRとSAXSによるマルチドメインタンパク質の構造解析2014

    • Author(s)
      三島 正規
    • Organizer
      第53回NMR討論会
    • Place of Presentation
      吹田
    • Year and Date
      2014-11-14 – 2014-11-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] In-cell NMRを志向したDOTA-M8リガンドの合成研究2014

    • Author(s)
      彦根 佑哉,平井 剛,袖岡 幹子,三島 正規,伊藤 隆
    • Organizer
      第53回NMR討論会
    • Place of Presentation
      吹田
    • Year and Date
      2014-11-14 – 2014-11-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] 擬コンタクトシフト情報収集のための、種々のランタノイド結合タグの検討2014

    • Author(s)
      飯沼 純弥,金場 哲平,小林 彩保,伊藤 隆,三島 正規
    • Organizer
      第53回NMR討論会
    • Place of Presentation
      吹田
    • Year and Date
      2014-11-14 – 2014-11-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] 溶液状態におけるRNA結合タンパク質Nrd1の構造解析2014

    • Author(s)
      小林彩保、中西絢子、佐藤亮介、藤原俊伸、伊藤隆、杉浦麗子、三島正規
    • Organizer
      第53回NMR討論会
    • Place of Presentation
      吹田
    • Year and Date
      2014-11-14 – 2014-11-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] RNA 結合蛋白質Nrd1 のNMR を用いた構造解析2014

    • Author(s)
      小林 彩保、中西 絢子、佐藤 亮介、藤原 俊伸、伊藤 隆、杉浦 麗子、三島 正規
    • Organizer
      RNAフロンティアミーティング2014
    • Place of Presentation
      和歌山県西牟婁郡
    • Year and Date
      2014-09-30 – 2014-10-02
    • Related Report
      2014 Annual Research Report
  • [Presentation] Structural studies of the RNA-binding protein Nrd1, a MAPK-target multi-domain protein using NMR and SAXS2014

    • Author(s)
      Masaki Mishima
    • Organizer
      The 5th Japan-Taiwan Bilateral NMR Symposium
    • Place of Presentation
      札幌
    • Year and Date
      2014-09-29 – 2014-09-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] NMR and SAXS analyses of the RNA-binding protein Nrd1, a MAPK-target multi-domain protein2014

    • Author(s)
      Ayaho Kobayashi, Ryosuke Satoh, Yutaka Ito, Reiko Sugiura Masaki Mishima
    • Organizer
      ICMRBS
    • Place of Presentation
      Dallas, USA
    • Year and Date
      2014-08-24 – 2014-08-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] RNA結合蛋白質Nrd1の溶液状態における構造解析2014

    • Author(s)
      小林 彩保、佐藤 亮介、藤原 俊伸、伊藤 隆、杉浦 麗子、三島 正規
    • Organizer
      第14回日本蛋白質科学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2014-06-25 – 2014-06-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] RNA結合蛋白質 Nrd1の NMR法による構造解析2013

    • Author(s)
      小林彩保, 佐藤亮介, 藤原俊伸, 伊藤隆, 杉浦麗子, 三島正規
    • Organizer
      第13回日本蛋白質科学会年会
    • Place of Presentation
      鳥取
    • Related Report
      2013 Research-status Report
  • [Presentation] NMRを用いた溶液中のマルチドメインタンパク質 PKCの構造解析の試み2013

    • Author(s)
      金場哲平, 秋吉克昂, 前崎綾子, 宮崎健介, 伊藤隆, 三島正規
    • Organizer
      第13回日本蛋白質科学会年会
    • Place of Presentation
      鳥取
    • Related Report
      2013 Research-status Report
  • [Presentation] 分裂酵母由来の MAP キナーゼによりリン酸化される RNA 結合タンパク質 Nrd1 の構造解析2013

    • Author(s)
      Kobayashi A., Satoh R., Fujiwara T., Sugiura R., Ito Y., Mishima M
    • Organizer
      第 51 回日本生物物理学会年会
    • Place of Presentation
      京都
    • Related Report
      2013 Research-status Report
  • [Presentation] 分裂酵母由来の MAP キナーゼによりリン酸化される RNA 結合タンパク質 Nrd1 の構造解析2013

    • Author(s)
      小林彩保, 佐藤亮介, 藤原俊伸, 伊藤隆, 杉浦麗子, 三島正規
    • Organizer
      第52回 NMR討論会
    • Place of Presentation
      金沢
    • Related Report
      2013 Research-status Report
  • [Presentation] マルチドメインタンパク質Protein kinase Cの構造解析の試み2013

    • Author(s)
      金場哲平, 矢巻菜央, 秋吉克昂, 前崎綾子, 宮崎健介, 伊藤隆, 三島正規
    • Organizer
      第52回 NMR討論会
    • Place of Presentation
      金沢
    • Related Report
      2013 Research-status Report
  • [Book] 細胞工学(転写抑制補助因子のcasein kinase 2によるリン酸化と転写制御)2014

    • Author(s)
      小林彩保、金場哲平、三島正規
    • Publisher
      学研メディカル秀潤社
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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