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Evolutionary developmental study by using genome-editing technologies for in vivo reconstruction of gene networks

Research Project

Project/Area Number 25650080
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Developmental biology
Research InstitutionThe University of Tokushima

Principal Investigator

Mito Taro  徳島大学, ソシオテクノサイエンス研究部, 助教 (80322254)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2014: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2013: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Keywordsゲノム編集 / 昆虫 / 発生 / 転写調節
Outline of Final Research Achievements

It remains unclear how the gene networks regulating development in multicellular organisms evolved. The experimental variation of such evolutionary processes has been possible only in limited cases. In the present study, we aimed to establish a method for in vivo reconstruction of gene networks using genome-editing technologies. We used a model insect, Gryllus bimaculatus, and achieved targeted gene knockout and knockin with CRISPR/Cas9 system. In addition, we produced genetic strains expressing a marker gene in a similar pattern of a targeted gene via enhancer trap. Thus, we established a technical basis for experimental modification of gene networks by modifying cis-regulatory sequences.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (24 results)

All 2015 2014 2013

All Journal Article (5 results) (of which Peer Reviewed: 3 results,  Open Access: 3 results,  Acknowledgement Compliant: 1 results) Presentation (16 results) (of which Int'l Joint Research: 3 results,  Invited: 6 results) Book (3 results)

  • [Journal Article] Knockout crickets for the study of learning and memory: Dopamine receptor Dop1 
mediates aversive but not appetitive reinforcement in crickets2015

    • Author(s)
      Awata H, Watanabe T, Hamanaka Y, Mito T, Noji S, Mizunami M.
    • Journal Title

      Scientific Reports

      Volume: 5 Issue: 1 Pages: 15885-15885

    • DOI

      10.1038/srep15885

    • NAID

      120006875677

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Gene knockout by targeted mutagenesis in a hemimetabolous insect, the two-spotted cricket Gryllus bimaculatus, using TALENs2014

    • Author(s)
      T. Watanabe, S. Noji and T. Mito
    • Journal Title

      Methods

      Volume: 69 Issue: 1 Pages: 17-21

    • DOI

      10.1016/j.ymeth.2014.05.006

    • Related Report
      2014 Research-status Report 2013 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Highly efficient targeted mutagenesis in one-cell mouse embryos mediated by the TALEN and CRISPR/Cas systems2014

    • Author(s)
      A. Yasue, S. N. Mitsui, T. Watanabe, T. Sakuma, S. Oyadomari, T. Yamamoto, S. Noji, T. Mito and E. Tanaka
    • Journal Title

      Sci Rep

      Volume: 4 Issue: 1 Pages: 5705-5705

    • DOI

      10.1038/srep05705

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] コオロギにおけるZFN, TALEN, CRISPR/Cas9を用いた遺伝子改変2014

    • Author(s)
      渡辺崇人,三戸太郎,大内淑代,野地澄晴
    • Journal Title

      実験医学別冊

      Volume: -

    • Related Report
      2013 Research-status Report
  • [Journal Article] ZFN/TALENを用いたコオロギの遺伝子ノックアウト2013

    • Author(s)
      渡辺崇人,三戸太郎,野地澄晴
    • Journal Title

      細胞工学

      Volume: 32 Pages: 543-549

    • Related Report
      2013 Research-status Report
  • [Presentation] CRISPR/Cas9システムを用いた遺伝子ノックアウトによるコオロギ胚発生制御メカニズムの解析2015

    • Author(s)
      友成さゆり、川本晃平、松岡佑児、渡辺崇人、石丸善康、野地澄晴、三戸太郎
    • Organizer
      第38回日本分子生物学会
    • Place of Presentation
      兵庫県神戸市、神戸国際展示場
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] CRISPR/Casシステムを用いた昆虫ゲノム改変技術の開発2015

    • Author(s)
      三戸太郎
    • Organizer
      第86回日本動物学会大会
    • Place of Presentation
      新潟県新潟市、新潟コンベンションセンター
    • Year and Date
      2015-09-18
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Functional analysis of a Hox gene, abdominal-A, using CRISPR/Cas9 system in the cricket Gryllus bimaculatus2015

    • Author(s)
      Yuji Matsuoka, Takahito Watanabe, Sayuri Tomonari, Sumihare Noji, Taro Mito
    • Organizer
      International Tribolium Meeting
    • Place of Presentation
      米国、カリフォルニア州バークレー
    • Year and Date
      2015-08-04
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Genome sequencing and annotation of the cricket Gryllus bimaculatus, a hemimetabolous insect model2015

    • Author(s)
      Taro Mito, Takehiko Itoh, Hiroya Morimoto, Ray Kajitani, Atsushi Toyoda, Sayuri Tomonari, Masao Fuketa, Takahito Watanabe, Yuji Matsuoka, Sumihare Noji
    • Organizer
      Ninth Annual Arthropod Genomics Symposium
    • Place of Presentation
      米国、カンザス州マンハッタン
    • Year and Date
      2015-06-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Genome editing in the two-spotted cricket, Gryllus bimaculatus, using CRISPR/Cas9 system2015

    • Author(s)
      Takahito Watanabe, Yuji Matsuoka, Sayuri Tomonari, Chinami Kurita, Sumihare Noji, Taro Mito
    • Organizer
      Insect Genetic Technologies Workshop
    • Place of Presentation
      米国、カンザス州マンハッタン
    • Year and Date
      2015-06-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] フタホシコオロギにおけるCRISPR/Cas9システムを用いたHox遺伝子abdominal-Aの機能解析2015

    • Author(s)
      松岡佑児,渡辺崇人,栗田千波,友成さゆり,野地澄晴,三戸太郎
    • Organizer
      第48回日本発生生物学会
    • Place of Presentation
      茨城県つくば市、つくば国際会議場
    • Year and Date
      2015-06-02
    • Related Report
      2015 Annual Research Report
  • [Presentation] Whole-genome sequencing and targeted genome editing in the cricket G. bimaculatus2014

    • Author(s)
      Taro Mito
    • Organizer
      Hokkaido Neuroethology Workshops 2014
    • Place of Presentation
      北海道大学(北海道札幌市)
    • Year and Date
      2014-06-27
    • Related Report
      2014 Research-status Report 2013 Research-status Report
    • Invited
  • [Presentation] In vivo study of Msx1 gene in mice using CRISPR/Cas system2014

    • Author(s)
      Silvia Mitsui, Akihiro Yasue, Issei Imoto, Seiichi Oyadomari, Sumihare Noji, Taro Mito, Eiji Tanaka
    • Organizer
      第47回日本発生生物学会
    • Place of Presentation
      WINC AICHI(愛知県名古屋市)
    • Year and Date
      2014-05-27 – 2014-05-30
    • Related Report
      2014 Research-status Report
  • [Presentation] Functions of Polycomb group gene in regulation of Hox gene expression in a primitive mode of insect embryogenesis in the cricket Gryllus bimaculatus2014

    • Author(s)
      Yuji Matsuoka, Tetsuya Bando, Takahito Watanabe, Sumihare Noji, Taro Mito
    • Organizer
      第47回日本発生生物学会
    • Place of Presentation
      WINC AICHI(愛知県名古屋市)
    • Year and Date
      2014-05-27 – 2014-05-30
    • Related Report
      2014 Research-status Report
  • [Presentation] Targeted gene disruption in the cricket, Gryllus bimaculatus, using CRISPR/Cas9 system2014

    • Author(s)
      Takahito Watanabe, Yuji Matsuoka, Taro Mito, Sumihare Noji
    • Organizer
      第47回日本発生生物学会
    • Place of Presentation
      WINC AICHI(愛知県名古屋市)
    • Year and Date
      2014-05-27 – 2014-05-30
    • Related Report
      2014 Research-status Report
  • [Presentation] Genome editing in a cricket using a CRISPR/Cas system2014

    • Author(s)
      Taro Mito, Takahito Watanabe, Sumihare Noji
    • Organizer
      1st Asian Invertebrate Immunity Symposium
    • Place of Presentation
      Pusan National University (Busan, Korea)
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] CRISPR/Casシステムを用いたフタホシコオロギにおけるゲノム編集2014

    • Author(s)
      三戸太郎・渡辺崇人・野地澄晴
    • Organizer
      第58回 日本応用動物昆虫学会大会(昆虫ホルモン談話会)
    • Place of Presentation
      高知大学(高知県高知市)
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Targeted genome modifications using ZFNs and TALENs in the cricket Gryllus bimaculatus2013

    • Author(s)
      Takahito Watanabe, Hiroshi Ochiai, Tetsushi Sakuma, Taro Nakamura, Taro Mito, Takashi Yamamoto, Sumihare Noji
    • Organizer
      第46回日本発生生物学会年会
    • Place of Presentation
      くにびきメッセ(島根県松江市)
    • Related Report
      2013 Research-status Report
  • [Presentation] Targeted genome modifications in the cricket, Gryllus bimaculatus2013

    • Author(s)
      Takahito Watanabe, Hiroshi Ochiai, Tetsushi Sakuma, Satoshi Ishihara, Taro Nakamura, Takashi Yamamoto, Sumihare Noji, and Taro Mito
    • Organizer
      Conference of Transposition & Genome Engineering 2013
    • Place of Presentation
      Danubius Thermal Hotel Margitsziget (Budapest, Hungary)
    • Related Report
      2013 Research-status Report
  • [Presentation] ゲノム編集技術によるノックアウトコオロギの作製2013

    • Author(s)
      渡辺崇人,松岡佑児,石原聡,山本卓,野地澄晴,三戸太郎
    • Organizer
      第15回 日本進化学会大会
    • Place of Presentation
      筑波大学(茨城県つくば市)
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] ゲノム編集技術によるノックアウトコオロギの作製2013

    • Author(s)
      三戸太郎,渡辺崇人,松岡佑児,山本卓,野地澄晴
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド(兵庫県神戸市))
    • Related Report
      2013 Research-status Report
    • Invited
  • [Book] 進化するゲノム編集技術2015

    • Author(s)
      渡辺崇人, 松岡佑児, 野地澄晴, 三戸太郎
    • Total Pages
      341
    • Publisher
      エヌ・ティー・エス
    • Related Report
      2015 Annual Research Report
  • [Book] TALENs: Methods and Protocols2015

    • Author(s)
      Watanabe T, Noji S, Mito T
    • Total Pages
      272
    • Publisher
      Springer
    • Related Report
      2015 Annual Research Report
  • [Book] 実験医学別冊 今すぐ始めるゲノム編集(山本卓編)第10章 コオロギにおけるZFN,TALEN,CRISPR/Cas9を用いた遺伝子改変2014

    • Author(s)
      渡辺崇人,三戸太郎,大内淑代,野地澄晴
    • Total Pages
      205
    • Publisher
      羊土社
    • Related Report
      2014 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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