• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Interactome analysis with biotin ligase in Arabidopsis

Research Project

Project/Area Number 25650096
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Plant molecular biology/Plant physiology
Research InstitutionKyoto University

Principal Investigator

TAMURA Kentaro  京都大学, 理学(系)研究科(研究院), 助教 (40378609)

Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2013: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywordsインタラクトーム / ビオチン / ビオチンライゲース / シロイヌナズナ / BirA / 相互作用
Outline of Final Research Achievements

Interactomics is a powerful resource to reveal the whole set of molecular protein network in the cells. In this study, we aimed to develop a novel tool for interactomics in plant nuclear envelope by using modified biotin ligase (BirA). We generated transgenic Arabidopsis plants expressing BirA-fused nuclear envelope protein. Western blot analyses indicated that the biotinylated proteins are specifically accumulated in the transgenic plants. However, the accumulation level of biotinylated proteins was low. To purify and identify more effectively, it is required for the system allowing higher accumulation of biotinylated proteins in the transgenic plants

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (15 results)

All 2015 2014 2013 Other

All Journal Article (9 results) (of which Peer Reviewed: 9 results,  Open Access: 7 results,  Acknowledgement Compliant: 1 results) Presentation (4 results) (of which Invited: 2 results) Remarks (2 results)

  • [Journal Article] Recent advances in understanding plant nuclear envelope proteins involved in nuclear morphology2015

    • Author(s)
      Kentaro Tamura, Chieko Goto and Ikuko Hara-Nishimura
    • Journal Title

      Journal of Experimental Botany

      Volume: 66 Issue: 6 Pages: 1641-1647

    • DOI

      10.1093/jxb/erv036

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] BEACH-Domain Proteins Act Together in a Cascade to Mediate Vacuolar Protein Trafficking and Disease Resistance in Arabidopsis.2015

    • Author(s)
      Teh OK, Hatsugai N, Tamura K, Fuji K, Tabata R, Yamaguchi K, Shingenobu S, Yamada M, Hasebe M, Sawa S, Shimada T, Hara-Nishimura I.
    • Journal Title

      Mol Plant

      Volume: 8 Issue: 3 Pages: 389-398

    • DOI

      10.1016/j.molp.2014.11.015

    • NAID

      120005646465

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Functional insights of nucleocytoplasmic transport in plants2014

    • Author(s)
      Tamura K, Hara-Nishimura I
    • Journal Title

      Front Plant Sci

      Volume: 5 Pages: 1-10

    • DOI

      10.3389/fpls.2014.00118

    • NAID

      120005439543

    • Related Report
      2014 Annual Research Report 2013 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] The Novel Nuclear Envelope Protein KAKU4 Modulates Nuclear Morphology in Arabidopsis2014

    • Author(s)
      Goto C, Tamura K, Fukao Y, Shimada T, Hara-Nishimura I.
    • Journal Title

      Plant Cell

      Volume: 26 Issue: 5 Pages: 2143-2155

    • DOI

      10.1105/tpc.113.122168

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] GFS9/TT9 contributes to intracellular membrane trafficking and flavonoid accumulation in Arabidopsis thaliana2014

    • Author(s)
      Ichino T, Fuji K, Ueda H, Takahashi H, Koumoto Y, Takagi J, Tamura K, Sasaki R, Aoki K, Shimada T, Hara-Nishimura I.
    • Journal Title

      Plant J

      Volume: 80 Issue: 3 Pages: 410-423

    • DOI

      10.1111/tpj.12637

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Nucleoporin 75, a component of nuclear pore complex, is involved in the MAPK-mediated production of ethylene leading to the accumulation of phytoalexin for the resistance of Nicotiana benthamiana to Phytophthora infestans2014

    • Author(s)
      Ohtsu et al.
    • Journal Title

      Mol. Plant Microbe Interact.

      Volume: 27 Issue: 12 Pages: 1318-1330

    • DOI

      10.1094/mpmi-06-14-0181-r

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] MAIGO5 Functions in Protein Export from Golgi-Associated Endoplasmic Reticulum Exit sites in Arabidopsis.2013

    • Author(s)
      Junpei Takagi, Luciana Renna, Hideyuki Takahashi, Yasuko Koumoto, Kentaro Tamura, Giovanni Stefano, Yoichiro Fukao, Maki Kondo, Mikio Nishimura, Tomoo Shimada, Federica Brandizzi, Ikuko Hara-Nishimura
    • Journal Title

      The Plant Cell

      Volume: 25(11) Issue: 11 Pages: 4658-75

    • DOI

      10.1105/tpc.113.118158

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A myosin XI-I Links the Nuclear Membrane with Cytoskeleton for Nuclear Movement and Shape in Arabidopsis thaliana2013

    • Author(s)
      Tamura K, Iwabuchi K, Fukao Y, Kondo M, Okamoto K, Ueda H, Nishimura M, Hara-Nishimura I
    • Journal Title

      Current Biology

      Volume: 23 Issue: 18 Pages: 1776-1781

    • DOI

      10.1016/j.cub.2013.07.035

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] The molecular architecture of the plant nuclear pore complex.2013

    • Author(s)
      Tamura K et al.
    • Journal Title

      J Exp Bot.

      Volume: 64(4) Issue: 4 Pages: 823-832

    • DOI

      10.1093/jxb/ers258

    • NAID

      120005324912

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] Interactive proteomics dissects structural dynamics of plant nuclear envelope.2014

    • Author(s)
      Tamura et al.
    • Organizer
      1st International Plant Proteomics Organisation World Congress
    • Place of Presentation
      Hamburg, Germany
    • Year and Date
      2014-08-31 – 2014-09-04
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Key regulators of nuclear structure and dynamics in Arabidopsis.2014

    • Author(s)
      Kentaro Tamura
    • Organizer
      Society for Experimental Biology Annual Main Meeting
    • Place of Presentation
      Manchester, United Kingdom
    • Year and Date
      2014-07-01 – 2014-07-04
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 植物の核膜がもつ新しい役割2014

    • Author(s)
      田村ら
    • Organizer
      日本植物生理学会
    • Place of Presentation
      富山大学
    • Related Report
      2013 Research-status Report
  • [Presentation] Characterisation of a novel nucleoporin and plant specific nuclear envelope proteins2013

    • Author(s)
      Tamura et al.
    • Organizer
      1st IPNC
    • Place of Presentation
      Oxford Brookes University, UK.
    • Related Report
      2013 Research-status Report
  • [Remarks] 植物学教室年報ー植物分子細胞生物学分科

    • URL

      http://www.bot.kyoto-u.ac.jp/annual/4_saibou.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] 細胞核の運動のしくみの解明 -植物固有のナノマシンの発見-

    • URL

      http://www.kyoto-u.ac.jp/ja/news_data/h/h1/news6/2013/130823_1.htm

    • Related Report
      2013 Research-status Report

URL: 

Published: 2014-07-25   Modified: 2019-07-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi