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Molecular mechanisms underlying high photosensitivity of vertebrate photoreceptor cells

Research Project

Project/Area Number 25650113
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Animal physiology/Animal behavior
Research InstitutionThe University of Tokyo

Principal Investigator

FUKADA Yoshitaka  東京大学, 理学(系)研究科(研究院), 教授 (80165258)

Co-Investigator(Renkei-kenkyūsha) SHIRAKI Tomoya  東京大学, 大学院理学系研究科, 特任助教 (40632352)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2013: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords視覚 / 光受容 / 視細胞 / 転写制御 / 棹体 / 錐体 / ゼブラフィッシュ / CRISPR/Cas9 / 桿体 / マイクロアレイ解析
Outline of Final Research Achievements

The photoreceptor cells are classified into rod and cone cells, which are distinct from each other in photoresponses. Mechanisms underlying these properties are understood at the molecular level, and phototransduction proteins differentially expressed in the rods and cones contribute to the distinct photoresponses of these photoreceptors. However, the phototransduction mechanism reported to date does not fully explain the different photoresponses between the rods and cones. To reveal comprehensive understanding of the physiological properties of the photoreceptors, we focused on the characteristic feature of the morphology of the photoreceptor outer segment. By a genome editing technology, we generated rod-less zebrafish and performed RNA-seq analysis to isolate genes enriched in the rods. We are now investigating the candidate genes by generating knock-out zebrafish to understand the molecular mechanisms for the unique functions of the photoreceptors.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (24 results)

All 2016 2015 2014 Other

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Acknowledgement Compliant: 1 results) Presentation (20 results) (of which Int'l Joint Research: 5 results,  Invited: 3 results) Book (1 results) Remarks (2 results)

  • [Journal Article] Homeobox transcription factor Six7 governs expression of green opsin genes in zebrafish.2015

    • Author(s)
      Yohey Ogawa, Tomoya Shiraki, Daisuke Kojima, Yoshitaka Fukada
    • Journal Title

      Proc. R. Soc. B

      Volume: 282 Issue: 1812 Pages: 20150659-20150659

    • DOI

      10.1098/rspb.2015.0659

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] Transcriptional network for regulation of cone visual opsin genes in zebrafish.2015

    • Author(s)
      Yohey Ogawa, Tomoya Shiraki, Daisuke Kojima, and Yoshitaka Fukada
    • Organizer
      第40回日本比較生理内分泌学会大会、日本比較生理生化学会第37回大会 合同大会
    • Place of Presentation
      JMSアステールプラザ ( 広島県広島市)
    • Year and Date
      2015-12-12
    • Related Report
      2015 Annual Research Report
  • [Presentation] Identification and characterization of differentially expressed genes among ciliary type photoreceptor neurons in zebrafish.2015

    • Author(s)
      Tomoya Shiraki, Yohey Ogawa, Daisuke Kojima, Yoshitaka Fukada
    • Organizer
      AOCP 2015
    • Place of Presentation
      Academia Sinica (Taiwan Taipei)
    • Year and Date
      2015-11-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Multiple types of retinal photoreceptors mediate background adaptation in larval zebrafish.2015

    • Author(s)
      Daisuke Kojima, Ikuko Sumikawa, Sho Matsumoto, Tomoya Shiraki, Yoshitaka Fukada
    • Organizer
      AOCP 2015
    • Place of Presentation
      Academia Sinica (Taiwan Taipei)
    • Year and Date
      2015-11-16
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] ゼブラフィッシュ幼生の体色変化を引き起こす網膜光受容体.2015

    • Author(s)
      小島 大輔、住川 育子、松本 翔、白木 知也、深田 吉孝
    • Organizer
      日本動物学会大86回新潟大会
    • Place of Presentation
      朱鷺メッセ ( 新潟県新潟市)
    • Year and Date
      2015-09-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] ゼブラフィッシュにおける光受容関連遺伝子の発現を調節する転写制御因子の機能解析.2015

    • Author(s)
      白木 知也、小島 大輔、深田 吉孝
    • Organizer
      日本動物学会大86回新潟大会
    • Place of Presentation
      朱鷺メッセ ( 新潟県新潟市)
    • Year and Date
      2015-09-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] Retinal photoreceptors for body color change in zebrafish.2015

    • Author(s)
      Daisuke Kojima
    • Organizer
      ICCPB 2015
    • Place of Presentation
      Jagiellonian University (Krakow Poland)
    • Year and Date
      2015-08-25
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] ゼブラフィッシュ緑色感受性視物質の遺伝子発現を支配するホメオボックス転写因子six7.2015

    • Author(s)
      深田 吉孝,小川 洋平,白木 知也,小島 大輔
    • Organizer
      視覚科学フォーラム第19回研究会
    • Place of Presentation
      ホテル福島グリーンパレス ( 福島県福島市)
    • Year and Date
      2015-08-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] A transcription factor governing expression of cone opsin genes in zebrafish retina.2015

    • Author(s)
      Yohey Ogawa, Tomoya Shiraki, Daisuke Kojima, Yoshitaka Fukada
    • Organizer
      FASEB:Biology and Chemistry of Vision
    • Place of Presentation
      Big SkyResort (Montana USA)
    • Year and Date
      2015-06-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Photoreceptors mediating background adaptation in zabrafish.2015

    • Author(s)
      Daisuke Kojima, Ikuko Sumikawa, Sho Matsumoto, Tomoya Shiraki, Yoshitaka Fukada
    • Organizer
      FASEB:Biology and Chemistry of Vision
    • Place of Presentation
      Big SkyResort (Montana USA)
    • Year and Date
      2015-06-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ゼブラフィッシュ錐体オプシン遺伝子の発現制御.2015

    • Author(s)
      小川洋平、白木知也、小島大輔、深田吉孝
    • Organizer
      日本動物学会第 67 回関東支部大会
    • Place of Presentation
      早稲田大学・先端生命医科学センター(東京都・新宿区)
    • Year and Date
      2015-03-14
    • Related Report
      2014 Research-status Report
  • [Presentation] ゼブラフィッシュにおける光受容細胞の機能的差異をもたらす転写ネットワークの解析.2014

    • Author(s)
      白木 知也、小島 大輔、深田 吉孝
    • Organizer
      日本動物学会第85回仙台大会2014
    • Place of Presentation
      東北大学川内北キャンパス(宮城県・仙台市)
    • Year and Date
      2014-09-11
    • Related Report
      2014 Research-status Report
  • [Presentation] Six3サブファミリーによるゼブラフィッシュ錐体オプシン遺伝子の発現制御.2014

    • Author(s)
      小川 洋平、白木 知也、小島 大輔、深田 吉孝
    • Organizer
      日本動物学会第85回仙台大会2014
    • Place of Presentation
      東北大学川内北キャンパス(宮城県・仙台市)
    • Year and Date
      2014-09-11
    • Related Report
      2014 Research-status Report
  • [Presentation] ゼブラフィッシュ桿体の分化・成熟過程を制御する転写調節機構.2014

    • Author(s)
      白木 知也、小島 大輔、深田 吉孝
    • Organizer
      視覚科学フォーラム第18回研究会
    • Place of Presentation
      前橋工科大学(群馬県・前橋市)
    • Year and Date
      2014-08-18
    • Related Report
      2014 Research-status Report
  • [Presentation] Transcriptional Profiles of Ciliary Photoreceptor Neurons in Zebrafish.2014

    • Author(s)
      Tomoya Shiraki, Daisuke Kojima, Yohey Ogawa, Yoshitaka Fukada
    • Organizer
      11th International Conference on Zebrafish Dvelopment and Genetics
    • Place of Presentation
      Madison(USA)
    • Year and Date
      2014-06-27
    • Related Report
      2014 Research-status Report
  • [Presentation] Comparative gene expression profiling among ciliary photoreceptor neurons in zebrafish.

    • Author(s)
      Tomoya Shiraki, Daisuke Kojima , Yohey Ogawa , Yoshitaka Fukada
    • Organizer
      FASEB:Biology and Chemistry of Vision
    • Place of Presentation
      スチームボートグランドホテル スチームボートスプリング市(コロラド州 米国)
    • Related Report
      2013 Research-status Report
  • [Presentation] 視細胞における錐体特異的な転写因子の機能解析.

    • Author(s)
      小川洋平、白木知也、小島大輔、深田吉孝
    • Organizer
      第56回日本神経化学会大会, 第23回日本神経回路学会大会 合同大会
    • Place of Presentation
      国立京都国際会館(京都府)
    • Related Report
      2013 Research-status Report
  • [Presentation] Gene expression profiles of ciliary photoreceptor neurons reveal a transcriptional network for photoreceptor differentiation in zebrafish.

    • Author(s)
      Tomoya Shiraki, Yohey Ogawa, Daisuke Kojima, Yoshitaka Fukada
    • Organizer
      日本比較生理生化学会 第35回大会
    • Place of Presentation
      イーグレ姫路(兵庫県)
    • Related Report
      2013 Research-status Report
  • [Presentation] ゼブラフィッシュにおける視細胞分化機構の解析.

    • Author(s)
      白木知也、小川洋平、小島大輔、深田吉孝
    • Organizer
      視覚科学フォーラム第17回研究会
    • Place of Presentation
      立命館大学びわこ・くさつキャンパス(滋賀県)
    • Related Report
      2013 Research-status Report
  • [Presentation] ゼブラフィッシュにおける錐体視細胞の分化機構へのアプローチ.

    • Author(s)
      小川洋平、小島 大輔、深田 吉孝
    • Organizer
      日本動物学会第84回岡山大会
    • Place of Presentation
      岡山大学津山キャンパス(岡山県)
    • Related Report
      2013 Research-status Report
  • [Presentation] 動物の背地適応を制御する光受容分子の探索.

    • Author(s)
      小島大輔
    • Organizer
      自然科学研究機構分子科学研究所 分子研研究会
    • Place of Presentation
      自然科学研究機構岡崎コンファレンスセンター(愛知県)
    • Related Report
      2013 Research-status Report
    • Invited
  • [Book] 光と生命の事典2016

    • Author(s)
      深田 吉孝
    • Total Pages
      436
    • Publisher
      朝倉書店
    • Related Report
      2015 Annual Research Report
  • [Remarks] 深田研究室

    • URL

      http://www.biochem.s.u-tokyo.ac.jp/fukada-lab/index-j.html

    • Related Report
      2015 Annual Research Report 2014 Research-status Report
  • [Remarks] 深田研究室

    • URL

      http://www.biochem.s.u-tokyo.ac.jp/fukada-lab/index-j.html

    • Related Report
      2013 Research-status Report

URL: 

Published: 2014-07-25   Modified: 2019-07-29  

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