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Identification of novel editing factors towards elucidation of molecular mechanism of RNA editing

Research Project

Project/Area Number 25660292
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Applied molecular and cellular biology
Research InstitutionNagoya University

Principal Investigator

SUGITA Mamoru  名古屋大学, 遺伝子実験施設, 教授 (70154474)

Co-Investigator(Renkei-kenkyūsha) AOKI Setsuyuki  名古屋大学, 大学院情報学研究科, 准教授 (30283469)
Research Collaborator ICHINOSE Mizuho  
SUGITA Chieko  
UCHIDA Masato  
NAKAMURA Takahiro  
Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2013: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
KeywordsRNA編集 / ミトコンドリア / 葉緑体 / ヒメツリガネゴケ / シチジンデアミナーゼ / RNAi / PPRタンパク質 / DYWドメイン / リボソームタンパク質
Outline of Final Research Achievements

In plant mitochondria and plastids, C-to-U RNA editing frequently occurs in many transcripts. However, the molecular mechanism of RNA editing remains to be elucidated. In this study, three novel RNA editing factors were identified in the moss Physcomitrella patens. In addition, a C-terminal 39 amino acid region of identified RNA editing factors was clarified to be required for editing site-specific recognition.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (16 results)

All 2015 2014 2013 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Acknowledgement Compliant: 1 results) Presentation (9 results) (of which Invited: 2 results) Remarks (4 results)

  • [Journal Article] Identification of a pentatricopeptide repeat RNA editing factor in Physcomitrella patens chloroplasts2014

    • Author(s)
      Mizuho Ichinose, Masato Uchida, Mamoru Sugita
    • Journal Title

      FEBS Letters

      Volume: 588 Issue: 21 Pages: 4060-4064

    • DOI

      10.1016/j.febslet.2014.09.031

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Architecture of the PPR gene family in the moss Physcomitrella patens2013

    • Author(s)
      Mamoru Sugita, Mizuho Ichinose, Mizuki Ide, Chieko Sugita
    • Journal Title

      RNA Biology

      Volume: 10 Issue: 9 Pages: 1439-1445

    • DOI

      10.4161/rna.24772

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Two DYW subclass PPR proteins are involved in RNA editing of ccmFc and atp9 transcripts in the moss Physcomitrella patens : first complete set of PPR editing factors in plant mitochondria2013

    • Author(s)
      Mizuho Ichinose, Chieko Sugita, Yusuke Yagi, Takahiro Nakamura, Mamoru Sugita
    • Journal Title

      Plant Cell Physiology

      Volume: 54 Issue: 11 Pages: 1907-1916

    • DOI

      10.1093/pcp/pct132

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] 植物オルガネラRNA編集におけるDYWドメインの機能解析2015

    • Author(s)
      一瀬瑞穂、杉田 護
    • Organizer
      第56回日本植物生理学会年会
    • Place of Presentation
      東京農業大学世田谷キャンパス
    • Year and Date
      2015-03-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] 植物オルガネラのPPRタンパク質とRNA編集2015

    • Author(s)
      一瀬瑞穂、杉田 護
    • Organizer
      第17回オルガネラワークショプ「オルガネラ機能の最適化メカニズム」
    • Place of Presentation
      東京大学駒場キャンパス
    • Year and Date
      2015-03-15
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] RNA編集におけるPPRタンパク質のDYWドメインの役割2015

    • Author(s)
      一瀬瑞穂、杉田 護
    • Organizer
      第4回植物RNA研究者ネットワークシンポジウム
    • Place of Presentation
      京都大学理学部セミナーハウス
    • Year and Date
      2015-01-19
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] オルガネラRNA編集におけるDYWドメインの役割2014

    • Author(s)
      一瀬瑞穂、杉田 護
    • Organizer
      日本植物学会第78回大会
    • Place of Presentation
      明治大学生田キャンパス
    • Year and Date
      2014-09-13
    • Related Report
      2014 Annual Research Report
  • [Presentation] ヒメツリガネゴケの遺伝子ターゲティングによるPPR遺伝子ファミリーの機能解析2014

    • Author(s)
      一瀬瑞穂、杉田護
    • Organizer
      日本蘚苔類学会第43回大会(青森大会)
    • Place of Presentation
      青森県十和田市星野リゾート奥入瀬渓流ホテル
    • Year and Date
      2014-08-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] ヒメツリガネゴケの葉緑体RNA 編集因子の同定2014

    • Author(s)
      一瀬瑞穂,内田雅人,杉田 護
    • Organizer
      第55回日本植物生理学会年会
    • Place of Presentation
      富山大学五福キャンパス
    • Related Report
      2013 Research-status Report
  • [Presentation] Functional analysis of the pentatricopeptide repeat protein family in Physcomitrella patens.2013

    • Author(s)
      Mamoru Sugita, Mizuho Ichinose, Chieko Sugita, Korechika Tanaka, Yasuhiro Kawaguchi, and Seiya Goto
    • Organizer
      16th International Conference MOSS 2013
    • Place of Presentation
      Masaryk Center, Prague, Czech Republic
    • Related Report
      2013 Research-status Report
  • [Presentation] ヒメツリガネゴケのミトコンドリアccmFc mRNAの近接した2カ所のRNA編集部位に働くDYWサブクラスPPRタンパク質2013

    • Author(s)
      一瀬瑞穂、杉田千恵子、八木祐介、中村崇裕、杉田 護
    • Organizer
      日本植物学会第77回大会
    • Place of Presentation
      北海道大学
    • Related Report
      2013 Research-status Report
  • [Presentation] Pentatricopeptide repeat (PPR) proteins in Physcomitrella patens2013

    • Author(s)
      Mizuho Ichinose, Chieko Sugita, Korechika Tanaka, Yasuhiro Kawaguchi, Seiya Goto, Akimi Takahashi and Mamoru Sugita
    • Organizer
      CREST symposium, Regulation of photosynthesis and chloroplast function
    • Place of Presentation
      Kyoto University
    • Related Report
      2013 Research-status Report
  • [Remarks] 杉田研究室ホームページ、論文リスト

    • URL

      http://www.gene.nagoya-u.ac.jp/~sugita-g/ronbun.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] 名古屋大学大学院理学研究科生命理学専攻ホームページ、論文紹介

    • URL

      http://www.bio.nagoya-u.ac.jp/paper/index.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] 杉田研究室ホームページ、論文リスト

    • URL

      http://www.gene.nagoya-u.ac.jp/~sugita-g/ronbun.html

    • Related Report
      2013 Research-status Report
  • [Remarks] 名古屋大学理学研究科生命理学専攻ホームページ、論文紹介

    • URL

      http://www.bio.nagoya-u.ac.jp/paper/index.html

    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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