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Development of the tumor marker detection method by RNA aptamer

Research Project

Project/Area Number 25670151
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field General medical chemistry
Research InstitutionKinki University (2015)
Nagoya City University (2013-2014)

Principal Investigator

FUJIWARA Toshinobu  近畿大学, 薬学部, 教授 (80362804)

Research Collaborator UENO Yoshihito  岐阜大学, 応用生物科学部, 教授 (20250467)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2014: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2013: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
KeywordsRNAアプタマー / 核酸医薬 / アプタマー
Outline of Final Research Achievements

Sphingosine 1-phosphate (S1P) is combined with a sphingosine 1-phosphate receptor (S1PR) emerging in the cell surface and shows bioactivity. Five subtypes of S1PR have been identified so far, and these are tissue-specific. Recently, it has been revealed that S1PR affected the malignant transformation of cancer deeply, and the positioning as the tumor marker became important. Therefore I used high polymer material called " RNA" with the artificial ligand which could be specifically combined with each subtype of S1PR and tried that it produced wounds. However, I succeeded in the construction of the S1PR surface presentation cell and tried whole Cell SELEX, but dominant RNA aptamer was not provided.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (22 results)

All 2015 2014 2013 Other

All Journal Article (8 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 8 results,  Open Access: 2 results,  Acknowledgement Compliant: 1 results) Presentation (13 results) (of which Int'l Joint Research: 1 results) Remarks (1 results)

  • [Journal Article] The molecular mechanism of translational control via the communication between the microRNA pathway and RNA-binding proteins2015

    • Author(s)
      Akira Fukao, Tomohiko Aoyama, Toshinobu Fujiwara
    • Journal Title

      RNA biology

      Volume: 12 Issue: 9 Pages: 922-926

    • DOI

      10.1080/15476286.2015.1073436

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Regnase-1 and Roquin Regulate
a Common Element in Inflammatory mRNAs by Spatiotemporally Distinct Mechanisms2015

    • Author(s)
      Takashi Mino, Yasuhiro Murakawa, Akira Fukao, Alexis Vandenbon, Hans-Hermann Wessels, Daisuke Ori, Takuya Uehata, Sarang Tartey, Shizuo Akira, Yutaka Suzuki, Carola G. Vinuesa, Uwe Ohler,
Daron M. Standley, Markus Landthaler, Toshinobu Fujiwara, Osamu Takeuchi.
    • Journal Title

      Cell

      Volume: 161 Issue: 5 Pages: 1058-1073

    • DOI

      10.1016/j.cell.2015.04.029

    • NAID

      120005608042

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Structural insights into the recruitment of SMRT by the corepressor SHARP under phosphorylative regulation.2014

    • Author(s)
      Mikami S, Kanaba T, Takizawa N, Kobayashi A, Maesaki R, Fujiwara T, Ito Y,Mishima M.
    • Journal Title

      Structure.

      Volume: 22 Issue: 1 Pages: 35-46

    • DOI

      10.1016/j.str.2013.10.007

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Microbial fluorescence sensing for human neurotensin receptor type lusing Ga-engineered yeast cells2013

    • Author(s)
      Jun Ishii, Asami Oda, Shota Togawa, Akira Fukao, Toshinobu Fujiwara, Chiaki Ogino and Akihiko Kondo
    • Journal Title

      Analytical Biochemistry

      Volume: 446 Pages: 37-43

    • DOI

      10.1016/j.ab.2013.10.016

    • Related Report
      2014 Research-status Report 2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] The essential role for the RNA triphosphatase Cetlp in nuclear import of the mRNA capping enzyme Cetlp-Ceglp complex of Saccharomyces cerevisiae2013

    • Author(s)
      Naoki Takizawa, Toshinobu Fujiwara, Manabu Yamasaki, Ayako Saito, Akira Fukao, Akio Nomoto, Kiyobisa Mizumoto
    • Journal Title

      ProsOne

      Volume: 8(10) Issue: 10 Pages: e78000-e78000

    • DOI

      10.1371/journal.pone.0078000

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Targeting cancer cell-specific RNA interference by siRNA delivery using a complex carrier of affibody-displaying bio-nanocapsules and liposomes.2013

    • Author(s)
      Nishimura Y, Mieda H, Ishii J, Ogino C, Fujiwara T, Kondo A.
    • Journal Title

      J Nanobiotechnology.

      Volume: 11 Issue: 1 Pages: 19-19

    • DOI

      10.1186/1477-3155-11-19

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Structure of the second RRM domain of Nrd1, a fission yeast MAPK target RNA binding protein, and implication for its RNA recognition and regulation.2013

    • Author(s)
      Kobayashi A, Kanaba T, Satoh R, Fujiwara T, Ito Y, Sugiura R, Mishima M.
    • Journal Title

      Biochem Biophys Res Commun.

      Volume: 437 Issue: 1 Pages: 12-17

    • DOI

      10.1016/j.bbrc.2013.06.008

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Staphylococcal superantigen-like protein 10 (SSL10) inhibits blood coagulation by binding to prothrombin and factor Xa via theirγ-carboxyglutamic acid (Gla) domain2013

    • Author(s)
      Itoh S, Yokoyama R, Kamoshida G, Fujiwara T, Okada H, Takii T, Tsuji T, Fujii S, Hashizume H, Onozaki K
    • Journal Title

      J Biol Chem

      Volume: 288 Issue: 30 Pages: 21569-21580

    • DOI

      10.1074/jbc.m113.451419

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] in vitro翻訳系を用いた新規創薬ターゲット同定法2015

    • Author(s)
      藤原俊伸
    • Organizer
      BMB2015 第38回日本分子生物学会年会 第88回日本生化学会大会 合同大会
    • Place of Presentation
      神戸ポートアイランド(兵庫県)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] High affinity RNA for capping enzyme of Saccharomyces cerevisiae2015

    • Author(s)
      Yuka Yamada, Manabu Yamasaki, Naoki Takizawa, Akira Fukao and Toshinobu Fujiwara
    • Organizer
      11th Annual Meeting of the Oligonucleotide Therapeutics Society
    • Place of Presentation
      Leiden, the Netherlands
    • Year and Date
      2015-10-11
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Analyses of cell type specific translation from the IRES mRNA derived from two different Poliovirus strains2014

    • Author(s)
      貞廣暁利、藤原俊伸
    • Organizer
      第 8 回 「 長野ミーティング :生物資源の有効利用を目指して」
    • Place of Presentation
      長野
    • Related Report
      2013 Research-status Report
  • [Presentation] Dissecting roles of Paip1 in HuD mediated translation activation2014

    • Author(s)
      青山智彦、藤原俊伸
    • Organizer
      第 8 回 「 長野ミーティング :生物資源の有効利用を目指して」
    • Place of Presentation
      長野
    • Related Report
      2013 Research-status Report
  • [Presentation] Effect of eIF4B phosphorylation by active Akt1 recruited into cap binding complex by HuD on translation2014

    • Author(s)
      矢野雄暉、藤原俊伸
    • Organizer
      第 8 回 「 長野ミーティング :生物資源の有効利用を目指して」
    • Place of Presentation
      長野
    • Related Report
      2013 Research-status Report
  • [Presentation] 高辻良文、藤原俊伸2014

    • Author(s)
      Translational regulation by HuD through the interaction with eIF3
    • Organizer
      第 8 回 「 長野ミーティング :生物資源の有効利用を目指して」
    • Place of Presentation
      長野
    • Related Report
      2013 Research-status Report
  • [Presentation] Functional relationship between HuD and Paip2 in differentiation of PC12 cells2014

    • Author(s)
      大塚衆志、藤原俊伸
    • Organizer
      第 8 回 「 長野ミーティング :生物資源の有効利用を目指して」
    • Place of Presentation
      長野
    • Related Report
      2013 Research-status Report
  • [Presentation] Novel cell free translation system using human cultured cell lines2014

    • Author(s)
      深尾亜喜良、藤原俊伸
    • Organizer
      第 8 回 「 長野ミーティング :生物資源の有効利用を目指して」
    • Place of Presentation
      長野
    • Related Report
      2013 Research-status Report
  • [Presentation] In vitro selection of RNA aptamer to SSTRs2014

    • Author(s)
      山田由佳、藤原俊伸
    • Organizer
      第 8 回 「 長野ミーティング :生物資源の有効利用を目指して」
    • Place of Presentation
      長野
    • Related Report
      2013 Research-status Report
  • [Presentation] High-throughput screening approach combining siRNA reverse-transfection and reporter mRNA transfection2014

    • Author(s)
      藤原俊伸
    • Organizer
      第 8 回 「 長野ミーティング :生物資源の有効利用を目指して」
    • Place of Presentation
      長野
    • Related Report
      2013 Research-status Report
  • [Presentation] The mechanism of translational control which targets a translation initiation complexa2013

    • Author(s)
      Akira Fukao, Nahum Sonenberg, Christian Thoma and Toshinobu Fujiwara
    • Organizer
      2013 RiboClub Annual Meeting
    • Place of Presentation
      ケベック
    • Related Report
      2013 Research-status Report
  • [Presentation] The RNA-binding protein HuD regulates cap-dependent translation by binding to the mRNA nuclear export receptor TAP/NXF12013

    • Author(s)
      Ryosuke Satoh, Akira Fukao, Akio Nomoto and Toshinobu Fujiwara
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Research-status Report
  • [Presentation] HuD accelerates cap-dependent translation through eIF4B phosphorylation by active Akt12013

    • Author(s)
      Yuki Yano, Akira Fukao and Toshinobu Fujiwara
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Research-status Report
  • [Remarks] 近畿大学薬学部医療薬学科生化学研究室ホームページ

    • URL

      http://www.phar.kindai.ac.jp/biochemistry/index.html

    • Related Report
      2015 Annual Research Report

URL: 

Published: 2014-07-25   Modified: 2019-07-29  

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