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Profiling of proteins associated with cell differentiation based on changes in relative abundance and post-translational modification.

Research Project

Project/Area Number 25670156
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Pathological medical chemistry
Research InstitutionTohoku University

Principal Investigator

IGARASHI KAZUHIKO  東北大学, 医学(系)研究科(研究院), 教授 (00250738)

Co-Investigator(Renkei-kenkyūsha) SHIMA Hiroki  東北大学, 大学院医学系研究科, 助手 (00448268)
Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2013: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords細胞分化 / 転写因子 / クロマチン / 質量分析
Outline of Final Research Achievements

Cell differentiation is mainly regulated by a concerted action of transcription factors and chromatin factors. Since these categories of proteins are relatively scarce in their amounts, identification of critical regulators has been challenging. In this project, we have tried to use mass spectrometry to compare relative levels of nuclear and chromatin proteins between B lymphoid cells and plasma cells. We also tried to compare post-translational modifications of proteins. The reproducibility of the protocols we established was confirmed via many rounds of repetition. The feasibility of the protocols were confirmed by comparing known regulators of B cells and plasma cells, such as Pax5, Bach2 and Irf4. We found several, uncharacterized transcription factors and chromatin factors whose expression was much higher in plasma cells. We are now carrying out functional analyses of these proteins.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (6 results)

All 2014 Other

All Presentation (4 results) Remarks (2 results)

  • [Presentation] Bach2の発現量が活性化B細胞の運命を決定する2014

    • Author(s)
      武藤哲彦、落合恭子、黒崎知博、五十嵐和彦
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] 形質細胞分化の誘導・維持に関わる転写因子とクロマチン制御因子の定量的質量分析による同定2014

    • Author(s)
      島弘季、高柳香、黒河内祐子、五十嵐和彦
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] Transcriptional Factor Bach2 is regulated by PI3K-mTOR pathway and promotes cell cycle arrest2014

    • Author(s)
      玉原亨、落合恭子、五十嵐和彦
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] Bach2 and HDAC3 repress Blimp-1 gene expression in B cells through the histone deacetylation2014

    • Author(s)
      武藤哲彦、田中 拡、落合恭子、加藤恭丈、仁尾正記、五十嵐和彦
    • Organizer
      Cold Spring Harbor Asia Conference: Frontiers of Immunology in Health and Diseases
    • Place of Presentation
      The Suzhou Dushu Lake Conference Center (中国・蘇州)
    • Year and Date
      2014-09-02 – 2014-09-06
    • Related Report
      2014 Annual Research Report
  • [Remarks] 東北大学大学院医学系研究科生物化学分野ホームページ

    • URL

      http://www.biochem.med.tohoku.ac.jp/

    • Related Report
      2014 Annual Research Report
  • [Remarks] 東北大学大学院医学系研究科生物化学分野ホームページ

    • URL

      http://www.biochem.med.tohoku.ac.jp/

    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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