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Establishment of novel assay methods for translocation type gene alterations.

Research Project

Project/Area Number 25670183
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Human pathology
Research InstitutionAichi Cancer Center Research Institute

Principal Investigator

YATABE Yasushi  愛知県がんセンター(研究所), 分子腫瘍学部, 研究員 (90280809)

Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2014: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2013: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Keywords遺伝子転座 / 検出法 / がん組織
Outline of Final Research Achievements

EML4 is transcriptionally active, but not ALK in the normal lung, and EML4-ALK translocation in lung cancer leads to activate the transcription of ALK kinase by the EML4 promoter. Therefore, ALK transcription has different patterns between 5’ and 3’ ends when the tumor has the translocation, and the difference can be utilized for a screening tool for the translocation. We examined 15 and 40 of ALK rearranged and wild type tumors, respectively, and found this method could work well with quantitative RT-PCR. Similarly, we applied this method to ROS and RET translocations, but the gene was expressed in the normal lung tissues. So, we defined the appropriate cut-off values, and also found the method could be used as a screening. Furthermore, we established immunohistochemistry to detect ROS1-rearranged tumors, and reported the results (Clin Lung Cancer 2015).

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (7 results)

All 2015 2014 2013

All Journal Article (4 results) (of which Peer Reviewed: 4 results) Presentation (3 results) (of which Invited: 2 results)

  • [Journal Article] ROS1 Immunohistochemistry Among Major Genotypes of Non-Small-Cell Lung Cancer2014

    • Author(s)
      Boyle, Theresa A Masago, Katsuhiro Ellison, Kim E Yatabe, Yasushi Hirsch, Fred R
    • Journal Title

      Clin Lung Cancer

      Volume: 16 Issue: 2 Pages: 106-11

    • DOI

      10.1016/j.cllc.2014.10.003

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] An International Interpretation Study Using the Alk Ihc Antibody D5f3 and a Sensitive Detection Kit Demonstrates High Concordance between Alk Ihc and Alk Fish and between Evaluators.2014

    • Author(s)
      Wynes MW, Sholl LM, Dietel M, Schuuring E, Tsao MS, Yatabe Y, Tubbs RR, Hirsch FR
    • Journal Title

      J Thorac Oncol.

      Volume: 9 Issue: 5 Pages: 631-8

    • DOI

      10.1097/jto.0000000000000115

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Solitary Pulmonary Metastasis from Lung Cancer Harboring Eml4-Alk after a 15-Year Disease-Free Interval.2013

    • Author(s)
      Tomizawa K, Ito S, Suda K, Fukui T, Usami N, Hatooka S, Kuwano H, Yatabe Y, Mitsudomi T.
    • Journal Title

      Lung Cancer.

      Volume: 80 Issue: 1 Pages: 99-101

    • DOI

      10.1016/j.lungcan.2012.12.011

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Diagnosis of lung cancer in small biopsies and cytology: implications of the 2011 International Association for the Study of Lung Cancer/American Thoracic Society/European Respiratory Society classification.2013

    • Author(s)
      Travis WD, Brambilla E, Noguchi M, Nicholson AG, Geisinger K, Yatabe Y, Ishikawa Y, Wistuba I, Flieder DB, Franklin W, Gazdar A, Hasleton PS, Henderson DW, Kerr KM, Petersen I, Roggli V, Thunnissen E and Tsao M.
    • Journal Title

      Arch Pathol Lab Med.

      Volume: 137 Issue: 5 Pages: 668-84

    • DOI

      10.5858/arpa.2012-0263-ra

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] Yasushi IHC proposal to IASLC path panel2015

    • Author(s)
      Yasushi Yatabe
    • Organizer
      IASLC pathology committee
    • Place of Presentation
      ハインズコンベンションセンター米国ボストン
    • Year and Date
      2015-03-20
    • Related Report
      2014 Annual Research Report
  • [Presentation] Molecular testing for EGFR/ALK2013

    • Author(s)
      Yasushi Yatabe
    • Organizer
      8th Asia Pacific IAP Congress
    • Place of Presentation
      Pusan, Korea
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] Molecular Testing2013

    • Author(s)
      Yasushi Yatabe
    • Organizer
      Pulmonary Pathology Society
    • Place of Presentation
      Grenoble, France
    • Related Report
      2013 Research-status Report
    • Invited

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Published: 2014-07-25   Modified: 2019-07-29  

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