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Development of a Subtraction Sequencing method for obtaining genomic information of parsites

Research Project

Project/Area Number 25670200
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Parasitology (including sanitary zoology)
Research InstitutionThe University of Tokyo

Principal Investigator

MATSUZAKI Motomichi  東京大学, 医学(系)研究科(研究院), 助教 (00511396)

Project Period (FY) 2013-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2013: ¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Keywordsゲノム / 超並列シーケンシング
Research Abstract

The objective of the present study was to develop a subtraction sequencing method for obtaining genomic information of unicellular parasites. Escherichia coli and Saccharomyces cerevisiae DNAs were used as models for a host and parasite genome, respectively. The latter DNA was concentrated by subtracting the former DNA from the DNA mixture with biotinated E. coli library and streptavidin magnetic beads. The concentration was verified with quantitative PCR. Now this method is proven as feasible, but further elaboration will be required for practical use.

Report

(2 results)
  • 2013 Annual Research Report   Final Research Report ( PDF )

URL: 

Published: 2014-07-25   Modified: 2016-11-25  

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