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The utility of targeted exome sequencing for mitochondrial disorders

Research Project

Project/Area Number 25670275
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Laboratory medicine
Research InstitutionKyushu University

Principal Investigator

MATSUSHIMA Yuichi  九州大学, 医学(系)研究科(研究院), 助教 (20571342)

Co-Investigator(Renkei-kenkyūsha) GOTO Yu-ichi  国立精神・神経医療研究センター, 神経研究所疾病研究第二部, 部長 (20225668)
Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2013: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsミトコンドリア病 / ミトコンドリア / 遺伝子診断 / ミトコンドリアDNA / β酸化
Outline of Final Research Achievements

Mitochondrial disease can be due to pathogenic mutations in mitochondrial DNA (mtDNA) or nuclear DNA coding for mitochondrial components. Over 100 nuclear genes have been identified that cause mitochondrial disease. We selected 776 nuclear-encoded mitochondrial genes that include known genes causing mitochondrial disease and candidate genes expected to be involved in critical mitochondrial functions and we constructed custom exome capture kit against 776 genes. To identify the responsible mutations in nuclear DNA, targeted exome sequencing was performed against genomic DNAs from the patients who have no pathogenic mutations in mtDNA. We identified mutations considered to be possibly disease-causing based in reported responsible genes and candidate responsible genes. Among these patients, we performed detailed analysis of a boy with short chain enoyl coenzyme A hydratase (ECHS1) deficiency.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (8 results)

All 2015 2014 2013

All Journal Article (1 results) (of which Peer Reviewed: 1 results) Presentation (7 results)

  • [Journal Article] ECHS1 mutations cause combined respiratory chain deficiency resulting in Leigh syndrome2015

    • Author(s)
      Sakai C, Yamaguchi S, Sasaki M, Miyamoto Y, Matsushima Y, Goto YI
    • Journal Title

      Human Mutation

      Volume: 36 Issue: 2 Pages: 232-239

    • DOI

      10.1002/humu.22730

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Presentation] ショウジョウバエ培養細胞におけるミトコンドリアマトリクスプロテアーゼの機能解析2014

    • Author(s)
      松島雄一、坂井千香、康東天、後藤 雄一
    • Organizer
      第14回日本ミトコンドリア学会年会
    • Place of Presentation
      九州大学医学部百年講堂(福岡市)
    • Year and Date
      2014-12-03 – 2014-12-05
    • Related Report
      2014 Annual Research Report
  • [Presentation] ショウジョウバエ培養細胞におけるミトコンドリアRNA結合タンパク質の役割2014

    • Author(s)
      廣藤雄太,松島雄一,康東天
    • Organizer
      第14回日本ミトコンドリア学会年会
    • Place of Presentation
      九州大学医学部百年講堂(福岡市)
    • Year and Date
      2014-12-03 – 2014-12-05
    • Related Report
      2014 Annual Research Report
  • [Presentation] ECHS1 の変異は呼吸鎖の活性低下を伴うLeigh症候群を引き起こす2014

    • Author(s)
      坂井千香、松島雄一、山口清次、佐々木征行、宮本雄策、後藤雄一
    • Organizer
      第14回日本ミトコンドリア学会年会
    • Place of Presentation
      九州大学医学部百年講堂(福岡市)
    • Year and Date
      2014-12-03 – 2014-12-05
    • Related Report
      2014 Annual Research Report
  • [Presentation] ミトコンドリア病の病因遺伝子の探索及び病因遺伝子の機能解析2014

    • Author(s)
      松島雄一、廣藤雄太、Laurie S Kaguni、康東天
    • Organizer
      第61回日本臨床検査医学会学術集会
    • Place of Presentation
      福岡国際会議場(福岡市)
    • Year and Date
      2014-11-22 – 2014-11-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] Leigh-like syndrome associated with calcification of the bilateral basal ganglia caused by compound heterozygous mutations in mitochondrial poly(A) polymeras2014

    • Author(s)
      Matsushima Y, Hatakeyama H, Takeshita E, Kitamura T, Kobayashi K, Yoshinaga H, Goto Y
    • Organizer
      EUROMIT 2014, 9th international Meeting on Mitochondrial Pathology
    • Place of Presentation
      タンペレ(フィンランド)
    • Year and Date
      2014-06-15 – 2014-06-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] Leigh-like syndrome associated with calcification of the bilateral basal ganglia caused by compound heterozygous mutations in mitochondrial poly(A) polymerase2013

    • Author(s)
      Yuichi Matsushima
    • Organizer
      第36回日本分子生物学会
    • Place of Presentation
      神戸ポートアイランド
    • Related Report
      2013 Research-status Report
  • [Presentation] Leigh-like syndrome associated with calcification of the bilateral basal ganglia caused by compound heterozygous mutations in mitochondrial poly(A) polymerase2013

    • Author(s)
      Yuichi Matsushima
    • Organizer
      International Symposium on Mitochondria 2013
    • Place of Presentation
      東京六本木ヒルズ
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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