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Analysis of enlargement mechanism of substrate specificity of CTX-M type beta-lactamase based on protein crystallography.

Research Project

Project/Area Number 25670276
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Laboratory medicine
Research InstitutionNara Medical University

Principal Investigator

YAMAMOTO Keizo  奈良県立医科大学, 医学部, 准教授 (90254490)

Co-Investigator(Kenkyū-buntansha) KASAHARA Kei  奈良県立医科大学, 医学部, 准教授 (50405403)
NAKAYAMA Akifumi  岐阜医療科学大学, 保険科学部, 教授 (70536721)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2015: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2014: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2013: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywordsβーラクタマーゼ / X線結晶構造解析 / 基質特異性 / 構造変化 / β―ラクタマーゼ / X線結晶構造解析 / 多剤耐性 / タンパク質精製 / クローニング / 大量発現 / 大腸菌
Outline of Final Research Achievements

Plasmid-mediated extended spectrum beta-lactamases (ESBLs) named CTX-M causes hospital- and community-acquired infections in Japan. Comparison of DNA sequences and structures of CTX-Ms showed that amino acid substitution in the three loop regions, omega-loop, VNYNP-loop, and a loop connecting alpha/beta domain mast be important to change of substrate specificity. Ala-219 which locates in a loop connecting alpha/beta domain is considered as a key residue to substrate specificity. Thus, the structures of three mutant enzymes, A219V, A219L, A219F, and wild type CTX-M-2 were solved. Although the structural difference among wild type, A219V, and A219F were very small, maximum XYZ-difference between wild type and A219L were 0.42 nm. It reveals that the structure of CTX-Ms is latently flexible and mutation in the loop region raises changes of overall structure and substrate specificity.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (22 results)

All 2016 2015 2014 2013

All Journal Article (11 results) (of which Peer Reviewed: 8 results) Presentation (11 results)

  • [Journal Article] First case of isolation of Kerstersia gyiorum from urinary tract.2016

    • Author(s)
      Ogawa Y, Koizumi A, Kasahara K, Lee ST, Yamada Y, Nakano R, Yano H, Mikasa K.
    • Journal Title

      J. Infect. Chemother.

      Volume: 22 Issue: 4 Pages: 265-267

    • DOI

      10.1016/j.jiac.2015.11.003

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 【感染症 いま何が起きているのか 基礎研究、臨床から国際支援まで】(第1章)感染症Hot topics 新興再興感染症を中心に 薬剤耐性菌の治療とその対策 抗菌薬は終わってしまうのか?2016

    • Author(s)
      小川 吉彦,笠原 敬,矢野 寿一
    • Journal Title

      実験医学

      Volume: 33 Pages: 2766-2770

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Nationwide surveillance of bacterial respiratory pathogens conducted by the surveillance committee of Japanese Society of Chemotherapy, the Japanese Association for Infectious Diseases, and the Japanese Society for Clinical Microbiology in 2010: General view of the pathogens' antibacterial susceptibility.2015

    • Author(s)
      Mikasa K, Kasahara K, Sano R
    • Journal Title

      J. Infect. Chemother.

      Volume: 21 Issue: 6 Pages: 410-420

    • DOI

      10.1016/j.jiac.2015.02.008

    • NAID

      120006986942

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Chronic invasive sinus and intracerebral aspergillosis controlled by combination therapy with micafungin and a daily dose of 400 mg itraconazole oral solution.2015

    • Author(s)
      Ogawa T, Matsumoto K, Tsujimoto K, Hishiya N, Yamada Y, Uno K, Kasahara K, Maeda K, Nario K, Mikasa K, Morita K.
    • Journal Title

      J. Infect. Chemother.

      Volume: 21 Issue: 2 Pages: 134-137

    • DOI

      10.1016/j.jiac.2014.08.010

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 【薬剤耐性菌感染症の早期診療-耐性菌はどう見分け、どう治療するか】 臨床における耐性菌感染症の病態・診断・治療 メチシリン耐性黄色ブドウ球菌(MRSA).2015

    • Author(s)
      笠原 敬
    • Journal Title

      感染と抗菌薬

      Volume: 18 Pages: 134-139

    • Related Report
      2015 Annual Research Report
  • [Journal Article] 陰部からの感染が疑われた劇症型溶血性レンサ球菌感染症2014

    • Author(s)
      中山章文、永江亜紀子、宇井孝爾、小泉 章、内池敬男、則本和伸
    • Journal Title

      日本臨床微生物学会誌

      Volume: 24 Pages: 41-46

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Serotype 35B Streptococcus pneumoniae, Japan, 2002-2012.2014

    • Author(s)
      Kasahara K, Komatsu Y, Koizumi A, Chang B, Ohnishi M, Muratani T, Mikasa K
    • Journal Title

      Journal of Infection and Chemotherapy

      Volume: 20 Issue: 3 Pages: 228-230

    • DOI

      10.1016/j.jiac.2013.11.008

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Continuous ampicillin infusion as an alternative to intermittent infusion for adult inpatients: a case series.2014

    • Author(s)
      Ogawa T, Kasahara K, Ikawa K, Shigeta J, Komatsu Y, Kuruno N, Uno K, Maeda K, Mikasa K.
    • Journal Title

      J. Infect. Chemother.

      Volume: 20 Issue: 10 Pages: 653-655

    • DOI

      10.1016/j.jiac.2014.05.006

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] 感染症診療のポイント】 救急・集中治療領域での抗菌治療 カルバペネム系薬剤2014

    • Author(s)
      笠原 敬,小林 正尚
    • Journal Title

      救急医学

      Volume: 38 Pages: 191-194

    • Related Report
      2014 Research-status Report
  • [Journal Article] Evaluation of the vitek 2 AST-N269 card for detection of meropenem resistance in imipenem-susceptible meropenem-resistant Enterobacteriaceae.2013

    • Author(s)
      Koizumi A, Kasahara K, Komatsu Y, Ui K, Mizuno F, Nakayama A, Mikasa K.
    • Journal Title

      J Clin Microbiol.

      Volume: 51 Issue: 11 Pages: 3908-3908

    • DOI

      10.1128/jcm.02063-13

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Effects of UV irradiation on the molecular weight of spider silk2013

    • Author(s)
      Takashi Matsuhira, Keizo Yamamoto and Shigeyoshi Osaki
    • Journal Title

      Polymer Journal

      Volume: 45 Issue: 11 Pages: 1167-1169

    • DOI

      10.1038/pj.2013.41

    • NAID

      40019844671

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] 臨床医と検査技師の連携~地域での連携、そして院内システムの構築へ~2016

    • Author(s)
      笠原 敬
    • Organizer
      第27回日本臨床微生物学会総会
    • Place of Presentation
      仙台
    • Year and Date
      2016-01-29
    • Related Report
      2015 Annual Research Report
  • [Presentation] 臨床検査技師と医師を対象にした他施設共同臨床微生物研修会の試み2016

    • Author(s)
      李 相太,笠原 敬,水野 文子,小泉 章,宇井 孝爾,阿部 教行,福田 砂織,口広 智一,藤原 美樹,市村 佳彦,米倉 久剛,山田 幸司,近澤 秀己,夏目 聖子,矢野 寿一,幸福 知己,中村 竜也
    • Organizer
      第27回日本臨床微生物学会総会
    • Place of Presentation
      仙台
    • Year and Date
      2016-01-29
    • Related Report
      2015 Annual Research Report
  • [Presentation] 高速リアルタイムPCR装置を用いた結核菌迅速検出法の開発2015

    • Author(s)
      中山章文、永井秀典、赤羽貴行、茂籠邦彦、水野文子
    • Organizer
      第64回日本医学検査学会
    • Place of Presentation
      福岡
    • Year and Date
      2015-05-16
    • Related Report
      2015 Annual Research Report
  • [Presentation] JAID/JSC感染症治療ガイド2014年改訂版はどこが変わった?2015

    • Author(s)
      笠原 敬,三笠 桂一
    • Organizer
      第89回日本感染症学会総会
    • Place of Presentation
      京都
    • Year and Date
      2015-04-16
    • Related Report
      2015 Annual Research Report
  • [Presentation] 血液培養から分離されたメチシリン感受性黄色ブドウ球菌の検討2015

    • Author(s)
      笠原 敬,小松 方,小松 祐子,李 相太,米川 真輔,梶田 明裕,今北 菜津子,今井 雄一郎,宇野 健司,前田 光一,中村(内山) ふくみ,古西 満,矢野 寿一,三笠 桂一
    • Organizer
      第89回日本感染症学会総会
    • Place of Presentation
      京都
    • Year and Date
      2015-04-16
    • Related Report
      2015 Annual Research Report
  • [Presentation] 質量分析法を用いた微生物同定についての基礎的検討2015

    • Author(s)
      高崎昭彦、山口央輝、中山章文、石黒啓司、星野真理
    • Organizer
      岐阜県医学検査学会
    • Place of Presentation
      岐阜県
    • Year and Date
      2015-03-22
    • Related Report
      2014 Research-status Report
  • [Presentation] 健常成人に発症したK1型Klebsiella Pneumoniaeによる肝膿瘍、敗血症性ショックの1例2014

    • Author(s)
      今井 雄一郎,宇野 健司,梶田 明裕,今北 奈津子,北 和也,小川 拓,米川 真輔,笠原 敬,中村(内山) ふくみ,前田 光一,古西 満,石井 良和,三笠 桂一
    • Organizer
      第57回日本感染症学会中日本地方会学術集会第84回日本感染症学会西日本地方会学術集会
    • Place of Presentation
      岡山県
    • Year and Date
      2014-10-24
    • Related Report
      2014 Research-status Report
  • [Presentation] 国内外における抗菌薬サーベイランスの現状と重要性2014

    • Author(s)
      笠原 敬,重田 純一,岡西 康治,三笠 桂一
    • Organizer
      第24回日本医療薬学会年会
    • Place of Presentation
      愛知県
    • Year and Date
      2014-09-27
    • Related Report
      2014 Research-status Report
  • [Presentation] 新生児髄膜炎由来大腸菌の遺伝子解析2014

    • Author(s)
      中山章文、松吉ひろ子、宇野健司、西川文子、山本惠三、河野 久
    • Organizer
      第25回日本臨床微生物学会
    • Place of Presentation
      名古屋
    • Related Report
      2013 Research-status Report
  • [Presentation] ESBL産生大腸菌による敗血症患者の臨床的検討2013

    • Author(s)
      小松祐子,笠原 敬,久留野紀子,小泉 章,水野文子,福盛達也,米川真輔,小川 拓,宇野健司,前田光一,古西 満,三笠桂一.
    • Organizer
      第61回日本化学療法学会西日本支部総会
    • Place of Presentation
      大阪
    • Related Report
      2013 Research-status Report
  • [Presentation] ESBL産生菌感染症に対する治療戦略2013

    • Author(s)
      笠原 敬
    • Organizer
      第26回日本外科感染症学会総会
    • Place of Presentation
      神戸
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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