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Understanding of cohesin dynamics during cell cycle at single molecule resolution

Research Project

Project/Area Number 25711002
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypePartial Multi-year Fund
Research Field Molecular biology
Research InstitutionNagoya University

Principal Investigator

Nishiyama Tomoko  名古屋大学, 理学研究科, 准教授 (90615535)

Project Period (FY) 2013-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥26,390,000 (Direct Cost: ¥20,300,000、Indirect Cost: ¥6,090,000)
Fiscal Year 2016: ¥6,370,000 (Direct Cost: ¥4,900,000、Indirect Cost: ¥1,470,000)
Fiscal Year 2015: ¥6,370,000 (Direct Cost: ¥4,900,000、Indirect Cost: ¥1,470,000)
Fiscal Year 2014: ¥5,590,000 (Direct Cost: ¥4,300,000、Indirect Cost: ¥1,290,000)
Fiscal Year 2013: ¥8,060,000 (Direct Cost: ¥6,200,000、Indirect Cost: ¥1,860,000)
Keywords姉妹染色分体間接着 / コヒーシン / 単分子解析 / 染色体ダイナミクス / 一分子観察 / 染色体構築
Outline of Final Research Achievements

Cohesin plays a crucial role in sister chromatid cohesion and gene expression. The dynamic association of cohesin with chromatin is essential for these functions. However, the exact nature of cohesin dynamics remains unclear. In this study I evaluated the dynamics of individual cohesin molecules on DNA and found that the cohesin possesses an intrinsic ability to traverse DNA in an ATPase-dependent manner. Translocation ability is suppressed in the presence of Wapl-Pds5 and Sororin; this suppression is alleviated by the acetylation of cohesin and the action of mitotic kinases. In Xenopus egg extracts, cohesin is translocated on DNA in an ATPase- and Smc3 acetylation-dependent manner. Cohesin movement changes to unidirectional when cohesin faces DNA replication; otherwise, it is incorporated into replicating DNA. This study provides insight into the nature of cell cycle-dependent changes of cohesin dynamics, and also evolutionally conserved mechanisms to regulate cohesin dynamics.

Report

(6 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • Research Products

    (23 results)

All 2017 2016 2015 2014 2013 Other

All Int'l Joint Research (1 results) Journal Article (4 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 4 results,  Acknowledgement Compliant: 2 results) Presentation (11 results) (of which Int'l Joint Research: 3 results,  Invited: 6 results) Remarks (7 results)

  • [Int'l Joint Research] IMP(Austria)

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Drosophila Dalmatian combines sororin and shugoshin roles in establishment and protection of cohesion2017

    • Author(s)
      Takashi Yamada, Eri Tahara, Mai Kanke, Keiko Kuwata, Tomoko Nishiyama
    • Journal Title

      EMBO Journal

      Volume: 印刷中 Issue: 11 Pages: 1513-1527

    • DOI

      10.15252/embj.201695607

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Cohesin acetylation and Wapl-Pds5 oppositely regulate translocation of cohesin along DNA.2016

    • Author(s)
      Mai Kanke, Eri Tahara, Pim J Huis in’t Veld, Tomoko Nishiyama
    • Journal Title

      The EMBO Journal

      Volume: 35 Issue: 24 Pages: 2686-2698

    • DOI

      10.15252/embj.201695756

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Aurora B and Cdk1 mediate Wapl activation and release of acetylated cohesin from chromosomes by phosphorylating Sororin2013

    • Author(s)
      Nishiyama T, Sykora MM, Huis In 't Veld PJ, Mechtler K, Peters JM
    • Journal Title

      Proc Natl Acad Sci U S A.

      Volume: 110 Issue: 33 Pages: 13404-13409

    • DOI

      10.1073/pnas.1305020110

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Wapl is an essential regulator of chromatin structure and chromosome segregation2013

    • Author(s)
      Tedeschi A, Wutz G, Huet S, Jaritz M, Wuensche A, Schirghuber E, Davidson IF, Tang W, Cisneros DA, Bhaskara V, Nishiyama T, Vaziri A, Wutz A, Ellenberg J, Peters JM
    • Journal Title

      Nature

      Volume: 501 Issue: 7468 Pages: 564-568

    • DOI

      10.1038/nature12471

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Presentation] 姉妹染色分体間接着と染色体分配のメカニクス2017

    • Author(s)
      西山 朋子
    • Organizer
      日本機械学会 第 29 回バイオエンジニアリング講演会
    • Place of Presentation
      Nagoya
    • Year and Date
      2017-01-20
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Cohesin dynamics on single DNA in Xenopus egg extracts2017

    • Author(s)
      Tomoko Nishiyama
    • Organizer
      The 2nd SMC meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 接着因子ダイナミクスから読み解く姉妹染色分体間接着機構2017

    • Author(s)
      西山 朋子
    • Organizer
      次世代両生類研究会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 染色体分配のメカニクスとその分子制御2017

    • Author(s)
      西山 朋子
    • Organizer
      ChemBio ハイブリッドレクチャー
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ツメガエル卵抽出液を用いた単分子DNA上におけるコヒーシンダイナミクスの解析2017

    • Author(s)
      西山 朋子
    • Organizer
      第35回 染色体ワークショップ
    • Related Report
      2017 Annual Research Report
  • [Presentation] Dalmatian is essential for protection of heterochromatin-based sister chromatid cohesion2016

    • Author(s)
      Tomoko Nishiyama
    • Organizer
      10th 3R symposium
    • Place of Presentation
      Matsue
    • Year and Date
      2016-11-13
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Dalmatian is essential for Heterochromatin-based establishment of sister-chromatid cohesion2015

    • Author(s)
      Tomoko Nishiyama
    • Organizer
      EMBO workshop: SMC proteins
    • Place of Presentation
      Vienna
    • Year and Date
      2015-05-12
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ヘテロクロマチンを基盤とした姉妹染色分体間接着機構2014

    • Author(s)
      西山 朋子
    • Organizer
      第 32 回染色体ワークショップ
    • Place of Presentation
      広島
    • Year and Date
      2014-12-15
    • Related Report
      2014 Annual Research Report
  • [Presentation] ショウジョウバエ細胞における Dalmatian の細胞内動態解析2014

    • Author(s)
      山田崇、西山朋子
    • Organizer
      第 32 回染色体ワークショップ
    • Place of Presentation
      広島
    • Year and Date
      2014-12-15
    • Related Report
      2014 Annual Research Report
  • [Presentation] Regulation of cohesin dynamics in entry into mitosis2013

    • Author(s)
      Nishiyama T
    • Organizer
      The 18th IMCB Symposium
    • Place of Presentation
      Tokyo
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 姉妹染色分体間接着の確立と解離の時空間制御2013

    • Author(s)
      西山朋子
    • Organizer
      日本細胞生物学会
    • Place of Presentation
      名古屋
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Remarks] 西山研究室ホームページ

    • URL

      http://www.bio.nagoya-u.ac.jp/~nishiyama/Nishiyamalab-home.html

    • Related Report
      2016 Annual Research Report
  • [Remarks] 名古屋大学大学院理学研究科生命理学専攻ホームページ

    • URL

      http://www.bio.nagoya-u.ac.jp/index.html

    • Related Report
      2016 Annual Research Report
  • [Remarks] 西山研ホームページ

    • Related Report
      2015 Annual Research Report
  • [Remarks] 名古屋大学大学院理学研究科生命理学専攻ホームページ

    • URL

      http://www.bio.nagoya-u.ac.jp/index.php

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
  • [Remarks] 西山研究室ホームページ

    • Related Report
      2014 Annual Research Report
  • [Remarks] 西山研

    • URL

      http://www.bio.nagoya-u.ac.jp/~nishiyama/Nishiyamalab-home.html

    • Related Report
      2013 Annual Research Report
  • [Remarks] 名古屋大学理学部生命理学科

    • URL

      http://www.bio.nagoya-u.ac.jp/laboratory/cb_ttp.html

    • Related Report
      2013 Annual Research Report

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Published: 2013-05-21   Modified: 2019-07-29  

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