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Toward cytoskeleton-based understanding of neuronal morphogenesis

Research Project

Project/Area Number 25730177
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Life / Health / Medical informatics
Research InstitutionKyoto University

Principal Investigator

Honda Naoki  京都大学, 医学(系)研究科(研究院), 准教授 (30515581)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,380,000 (Direct Cost: ¥2,600,000、Indirect Cost: ¥780,000)
Fiscal Year 2015: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2013: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Keywords細胞骨格系 / アクチンフィラメント / 微小管 / 神経極性 / 成長円錐 / 糸状仮足 / 細胞移動 / 数理モデル / 細胞骨格
Outline of Final Research Achievements

We developed a mathematical model of elastic cytoskeleton. Based on this model, we identified the conditions that F-actins self-organize to bundle structure, mesh structure and network structure. We also developed a mathematical model of microtubule orientation in axon and dendrite, and then reproduced three distinct orientation patterns depending parameters. In addition, based on FERT imaging on migratory cells, we clarified how molecular signals are transmitted to morphological changes via cytoskeletal regulation. Moreover, we constructed a theory describing bi-directional attractive and repulsive turning response of the nerve growth cone.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (13 results)

All 2016 2015 2014

All Journal Article (5 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 4 results,  Open Access: 3 results,  Acknowledgement Compliant: 1 results) Presentation (8 results) (of which Invited: 3 results)

  • [Journal Article] Reconstruction of spatial thermal gradient encoded in thermosensory neuron AFD in Caenorhabditis elegans.2016

    • Author(s)
      Tsukada, Y., Yamao, M., Honda, N., Shimowada, T., Ohnishi, N., Kuhara, A., Ishii, S., Mori, I.
    • Journal Title

      J Neurosci.

      Volume: 36 Issue: 9 Pages: 2571-2581

    • DOI

      10.1523/jneurosci.2837-15.2016

    • NAID

      120006360790

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Distinct predictive performance of Rac1 and Cdc42 in cell migration.2015

    • Author(s)
      Masataka Yamao, Honda Naoki, Katsuyuki Kunida, Kazuhiro Aoki, Michiyuki Matsuda, Shin Ishii
    • Journal Title

      Scientific Reports

      Volume: 5:17527 Issue: 1 Pages: 1-14

    • DOI

      10.1038/srep17527

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Intercellular propagation of extracellular signal-regulated kinase activation revealed by in vivo imaging of mouse skin.2015

    • Author(s)
      Hiratsuka T, Fujita Y, Naoki H, Aoki K, Kamioka Y, Matsuda M
    • Journal Title

      eLife

      Volume: - Pages: 1-18

    • DOI

      10.7554/elife.05178

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] 細胞移動のシステム同定2014

    • Author(s)
      本田直樹、山尾将隆、石井信
    • Journal Title

      生命の科学

      Volume: 65 Pages: 468-469

    • Related Report
      2014 Research-status Report
  • [Journal Article] Mathematical modeling of neuronal polarization during development2014

    • Author(s)
      Honda Naoki, Shin Ishii
    • Journal Title

      Progress in Molecular Biology and Translational Science

      Volume: 41 Pages: 123-127

    • DOI

      10.1016/b978-0-12-397897-4.00003-6

    • ISBN
      9780123978974
    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] 神経軸索の走化性と神経回路形成の数理的アプローチ2016

    • Author(s)
      本田直樹
    • Organizer
      第121回日本解剖学会総会
    • Place of Presentation
      ビックパレット福島
    • Year and Date
      2016-03-28
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 外部シグナルに制御される細胞集団移動の数理モデル2015

    • Author(s)
      村瀬晃生, 本田 直樹, 石井 信
    • Organizer
      電子情報通信学会技術研究報告NC
    • Place of Presentation
      玉川大学
    • Year and Date
      2015-03-16 – 2015-03-17
    • Related Report
      2014 Research-status Report
  • [Presentation] 神経軸索誘導における誘引的および忌避的走化性の数理モデル2014

    • Author(s)
      本田直樹
    • Organizer
      生命ダイナミクスの数理とその応用:異分野とのさらなる融合
    • Place of Presentation
      東京大学大学院数理科学研究科 大講義室
    • Year and Date
      2014-12-02 – 2014-12-04
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] A model of Amygdala and mPFC interactions for large resistance to extinction of partially reinforced fear memory.2014

    • Author(s)
      Li, Y., Ishii, S., & Naoki, H.
    • Organizer
      Society for Neuroscience Annual Meeting
    • Place of Presentation
      Washington DC, USA
    • Year and Date
      2014-11-15 – 2014-11-19
    • Related Report
      2014 Research-status Report
  • [Presentation] Reconstruction of cellular migrating behavior based on molecular activity2014

    • Author(s)
      Naoki, H., Masataka, Y., & Ishii, S
    • Organizer
      Flies, worms and robots: combining perspectives on minibrains and behaviour.
    • Place of Presentation
      Sant Feliu de Guixols, Spain
    • Year and Date
      2014-11-08 – 2014-11-13
    • Related Report
      2014 Research-status Report
  • [Presentation] A model of BA-mPFC interaction for resistance to extinction in partial reinforcement fear conditioning.2014

    • Author(s)
      Li, Y., Ishii, S., & Naoki, H.
    • Organizer
      日本神経科学大会
    • Place of Presentation
      函館みらい大学
    • Year and Date
      2014-08-27 – 2014-08-29
    • Related Report
      2014 Research-status Report
  • [Presentation] A Model of Orientational Organization of Microtubule in Axon and Dendrite during Polarization2014

    • Author(s)
      Katsuhiro Uegaki, Honda Naoki and Shin Ishii
    • Organizer
      2014 Winter q-bio Meeting
    • Place of Presentation
      Big island in hawaii
    • Related Report
      2013 Research-status Report
  • [Presentation] 細胞内シグナルが制御する細胞移動のシステム同定2014

    • Author(s)
      本田直樹
    • Organizer
      数学協働プログラム 「生命ダイナミックスの数理とその応用」
    • Place of Presentation
      東京大学 駒場キャンパス
    • Related Report
      2013 Research-status Report
    • Invited

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Published: 2014-07-25   Modified: 2019-07-29  

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