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Approach to biological information processing in a perspective of soft matter physics

Research Project

Project/Area Number 25730178
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Life / Health / Medical informatics
Research InstitutionHokkaido University

Principal Investigator

KUNITA Itsuki  北海道大学, 電子科学研究所, 博士研究員 (20645478)

Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
Fiscal Year 2014: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2013: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords細胞運動 / アクチン繊維 / 集団挙動 / ソフトマター物理 / レオロジー / shear banding / 真正粘菌変形体
Outline of Final Research Achievements

To study the mechanism of information processing in organisms is interesting from a scientific point of view and is important from a point of view of an informational technology. As cellular motion results from the reception of external environment and the information processing in the cell, it serves as a good model for understanding the information processing functions in living-organisms. In this project, we focus on a cellular motion in soft matter physics. We found that the orientation of actin filaments, which is one of the cytoskeletal proteins, in protoplasmic flow is related more closely to force generation in the cell.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (14 results)

All 2015 2014 2013

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (12 results) Book (1 results)

  • [Journal Article] Attempts to retreat from a dead-ended long capillary by backward swimming in Paramecium2014

    • Author(s)
      Itsuki Kunita, Shigeru Kuroda, Kaito Ooki, Toshiyuki Nakagaki
    • Journal Title

      Frontiers in Microbiology

      Volume: 5 Pages: 1-8

    • DOI

      10.3389/fmicb.2014.00270

    • NAID

      120005465482

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] Self-propelled particle model for memorizing the size of a circular vessel2014

    • Author(s)
      Tatsuya Yamaguchi, Atsushi Tero, Masakazu Akiyama, Itsuki Kunita, and Toshiyuki Nakagaki
    • Organizer
      The sixth international symposium on aero aqua bio-mechanisms
    • Place of Presentation
      Hawaii, USA
    • Year and Date
      2014-11-13 – 2014-11-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] Mathematical model for self-propelled particle based on single-celled ciliate Tetrahymena2014

    • Author(s)
      Tatsuya Yamaguchi, Atsushi Tero, Masakazu Akiyama, Itsuki Kunita, and Toshiyuki Nakagaki
    • Organizer
      Forum Math-for-Industry 2014
    • Place of Presentation
      九州大学
    • Year and Date
      2014-10-27 – 2014-10-31
    • Related Report
      2014 Annual Research Report
  • [Presentation] Shear banding in an F-actin solution2014

    • Author(s)
      Itsuki Kunita, Katsuhiko Sato, Yoshimi Tanaka, Yoshinori Takikawa, Hiroshi Orihara, and Toshiyuki Nakagaki
    • Organizer
      第52回 日本生物物理学会年会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] Coiling of catenaries made from Physarum tube2014

    • Author(s)
      Takahiro Noguchi, Taito Watanabe, Itsuki Kunita, Hirofumi Wada, Toshiyuki Nakagaki, and Yoshimi Tanaka
    • Organizer
      第52回 日本生物物理学会年会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] Adaptive capacity of spatial expansion in the ciliate protozoan Tetrahymena2014

    • Author(s)
      Itsuki Kunita, Tatsuya Yamaguchi, Atsushi Tero, Masakazu Akiyama, and Toshiyuki Nakagaki
    • Organizer
      the Joint Annual Meeting of the Japanese Society for Mathematical Biology and the Society for Mathematical Biology
    • Place of Presentation
      大阪国際会議場
    • Year and Date
      2014-07-28 – 2014-08-01
    • Related Report
      2014 Annual Research Report
  • [Presentation] The analyses based on a membrane excitation model for Long-term Backward Swimming in a protozoa Paramecium2014

    • Author(s)
      Kaito Ohki, Itsuki Kunita, Shigeru Kuroda, and Toshiyuki Nakagaki
    • Organizer
      the Joint Annual Meeting of the Japanese Society for Mathematical Biology and the Society for Mathematical Biology
    • Place of Presentation
      大阪国際会議場
    • Year and Date
      2014-07-28 – 2014-08-01
    • Related Report
      2014 Annual Research Report
  • [Presentation] Analysis of behavior and cellular oscillation of an amoeba encountering a chemical bump2014

    • Author(s)
      Dai Akita, Itsuki Kunita, Shigeru Kuroda, and Toshiyuki Nakagaki
    • Organizer
      the Joint Annual Meeting of the Japanese Society for Mathematical Biology and the Society for Mathematical Biology
    • Place of Presentation
      大阪国際会議場
    • Year and Date
      2014-07-28 – 2014-08-01
    • Related Report
      2014 Annual Research Report
  • [Presentation] Shear Banding in an F-actin Solution2014

    • Author(s)
      Yoshinori Takikawa, Hiroshi Orihara, Katsuhiko Sato, Yoshimi Tanaka, Itsuki Kunita, and Toshiyuki Nakagaki
    • Organizer
      6th Pacific Rim Conference on Rheology
    • Place of Presentation
      Melbourne, Australia
    • Year and Date
      2014-07-20 – 2014-07-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] Shear banding in an F-actin solution2014

    • Author(s)
      Itsuki Kunita, Katsuhiko Sato, Yoshimi Tanaka, Yoshinori Takikawa, Hiroshi Orihara, and Toshiyuki Nakagaki
    • Organizer
      2014 Gordon Research Conference on Oscillations & Dynamic Instabilities in Chemical Systems ~ Self-Organization and Complexity ~
    • Place of Presentation
      Girona, Spain
    • Year and Date
      2014-07-13 – 2014-07-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] Behavioral diversity and decision-making of an amoeboid cell2014

    • Author(s)
      Toshiyuki Nakagaki, Itsuki Kunita, and Kei-ichi Ueda
    • Organizer
      2014 Gordon Research Conference on Oscillations & Dynamic Instabilities in Chemical Systems ~ Self-Organization and Complexity ~
    • Place of Presentation
      Girona, Spain
    • Year and Date
      2014-07-13 – 2014-07-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] Shear banding in an F-actin solution2013

    • Author(s)
      Itsuki Kunita, Katsuhiko Sato, Yoshimi Tanaka, Yoshinori Takikawa, Hiroshi Orihara, and Toshiyuki Nakagaki
    • Organizer
      The 14th RIES-HOKUDAI INTERNATIONAL SYMPOSIUM
    • Place of Presentation
      ガトーキングダムサッポロ(札幌市)
    • Related Report
      2013 Research-status Report
  • [Presentation] Shear Banding of F-Actin Solution2013

    • Author(s)
      Yoshinori Takikawa, Itsuki Kunita, Katsuhiko Sato, Yoshimi Tanaka, Hiroshi Orihara, and Toshiyuki Nakagaki
    • Organizer
      第61回レオロジー討論会
    • Place of Presentation
      山形大学(山形市)
    • Related Report
      2013 Research-status Report
  • [Book] 研究者が教える動物実験 第3巻2015

    • Author(s)
      日本比較生理生化学会編, 分担執筆(國田樹, 黒田茂)
    • Publisher
      共立出版
    • Related Report
      2014 Annual Research Report

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Published: 2014-07-25   Modified: 2019-07-29  

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