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Synthetic Study for Piperidamycins

Research Project

Project/Area Number 25750381
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Biomolecular chemistry
Research InstitutionTohoku University

Principal Investigator

YOSHIDA MASAHITO  東北大学, 薬学研究科(研究院), 助教 (80511906)

Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2013: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords全合成 / デプシペプチド / 抗菌活性 / ピペラジン酸 / 環状デプシペプチド
Outline of Final Research Achievements

Synthetic studies of piperidamycin F and JBIR-39 were investigated. Acylation of gamma-hydroxypiperazic acid with acid chloride was efficiently performed in the presence of Sc(OTf)3 to afford the corresponding dipeptide in good yield. Synthesis of oligopiperazic acid structure, followed by removal of the protecting groups furnished the natural product JBIR-39. The structure of JBIR-39 was unequivocally determined, and its absolute configurations were established to be 2S, 6S, 8S, 11R, 16S, 21R, 26S, 27S. Based on the above results, synthesis of pipericamycin F was also investigated and preparation of its macrocyclic structure was carried out by macrolatonization using 2-methyl-6-nitrobenzoic anhydride (MNBA).

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (5 results)

All 2015 2014 2013

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Acknowledgement Compliant: 1 results) Presentation (4 results) (of which Invited: 1 results)

  • [Journal Article] Total Synthesis and Structure Elucidation of JBIR-39: A Linear Hexapeptide Possessing Piperazic Acid and γ-Hydroxypiperazic Acid Residues2015

    • Author(s)
      Yoshida, M.; Sekioka, N.; Izumikawa, M.; Kozone, I.; Takagi, M.; Shin-ya, K.; Doi, T.
    • Journal Title

      Chemistry A European Journal

      Volume: 21 Issue: 7 Pages: 3031-3041

    • DOI

      10.1002/chem.201406020

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] 特異な生理活性を示す天然物の全合成と作用機構解明に向けた研究2014

    • Author(s)
      吉田将人
    • Organizer
      第36回東北薬学セミナー
    • Place of Presentation
      仙台ガーデンパレス,仙台
    • Year and Date
      2014-12-06
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] オリゴピペラジン酸含有天然物JBIR-39の全合成およびPiperidamycin Fの全合成研究2014

    • Author(s)
      関岡直樹,吉田将人,高木基樹,泉川美穂,新家一男,土井隆行
    • Organizer
      第56回天然有機化合物討論会
    • Place of Presentation
      高知県立県民ホール,高知
    • Year and Date
      2014-10-15 – 2014-10-17
    • Related Report
      2014 Annual Research Report
  • [Presentation] Synthetic Study for Cyclodepsipeptide Piperidamycins2013

    • Author(s)
      Naoki Sekioka, Masahito Yoshida, Miho Izumikawa, Motoki Takagi, Kazuo Shin-ya, and Takayuki Doi
    • Organizer
      International Symposium for the 70th Anniversary of the Tohoku Branch of the Chemical Society of Japan
    • Place of Presentation
      仙台
    • Related Report
      2013 Research-status Report
  • [Presentation] Synthetic Study of Piperidamycins2013

    • Author(s)
      Naoki Sekioka, Masahito Yoshida, Miho Izumikawa, Motoki Takagi, Kazuo Shin-ya, and Takayuki Doi
    • Organizer
      ICCA-13 (13th International Conference on the Chemistry of Antibiotics and other bioactive comopunds
    • Place of Presentation
      山梨
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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